Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:00 (1904036): wrapper (7.7.26015): starting
04:15:00 (1904036): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 04:15:00] Arguments: --nthreads 3
[2026-01-09 04:15:00] Threads: 3
[2026-01-09 04:15:00] Checking for CVMFS
[2026-01-09 04:15:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:15:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:15:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:15:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:15:00] 2.9.2.0 1843115 244 53748 154929 4 1 26262834 36864000 0 130560 0 148641 99.985 10930 894 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 04:15:00] CVMFS is ok
[2026-01-09 04:15:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:15:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:15:00] Further information can be found at the LHC@home message board.
[2026-01-09 04:15:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:15:00] Checking for apptainer binary...
[2026-01-09 04:15:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:15:00] Running /usr/bin/apptainer --version
[2026-01-09 04:15:00] apptainer version 1.4.1-1.1
[2026-01-09 04:15:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:15:00] atlasA215a
[2026-01-09 04:15:00] apptainer works
[2026-01-09 04:15:00] Set ATHENA_PROC_NUMBER=3
[2026-01-09 04:15:00] Set ATHENA_CORE_NUMBER=3
[2026-01-09 04:15:00] Starting ATLAS job with PandaID=6963079307
[2026-01-09 04:15:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:15:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:15:21] 2026-01-09 05:14:18,221 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 06:15:21] 2026-01-09 05:14:18,891 | INFO     | time since job start (7152s) is within the limit (174528.0s)
[2026-01-09 06:15:21] 2026-01-09 05:14:19,553 | INFO     | monitor loop #548: job 0:6963079307 is in state 'finished'
[2026-01-09 06:15:21] 2026-01-09 05:14:19,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:15:21] 2026-01-09 05:14:20,896 | INFO     | time since job start (7154s) is within the limit (174528.0s)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,056 | INFO     | monitor loop #549: job 0:6963079307 is in state 'finished'
[2026-01-09 06:15:21] 2026-01-09 05:14:22,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,690 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:15:21] 2026-01-09 05:14:22,692 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3686.0513333333333
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963079307/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | INFO     | extracted standard info from prmon json
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:15:21] 2026-01-09 05:14:22,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | sum of square deviations: 496597218.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | sum of deviations: -7587387278.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | mean x: 1767932064.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | mean y: 2427749.8803418805
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | intersect: 27014228792.152554
[2026-01-09 06:15:21] 2026-01-09 05:14:22,694 | INFO     | chi2: 1.5210208499150633
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | sum of square deviations: 435610028.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | sum of deviations: -6277543122.999999
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | mean x: 1767931911.5
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | mean y: 2431028.5178571427
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | intersect: 25479963912.51535
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | chi2: 1.5227120042218625
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | current chi2=1.5227120042218625 (change=-0.11118547828543326 %)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | right removable region: 111
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | sum of square deviations: 435610028.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | sum of deviations: -22095194055.999996
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | mean x: 1767932216.5
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | mean y: 2463048.5535714286
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | intersect: 89676260460.35626
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | chi2: 0.048894804504567915
[2026-01-09 06:15:21] 2026-01-09 05:14:22,695 | INFO     | current chi2=0.048894804504567915 (change=96.7853955120143 %)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | sum of square deviations: 379832238.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | sum of deviations: -19091804278.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | mean x: 1767932369.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | mean y: 2454904.570093458
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | intersect: 88865419626.61371
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | chi2: 0.046223034283476974
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | current chi2=0.046223034283476974 (change=5.464323353294797 %)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | left removable region: 20
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | sum of deviations: -13516967308.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | mean x: 1767932491.0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | mean y: 2447896.087912088
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | intersect: 102283406023.44017
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | chi2: 0.03990398648518738
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | current memory leak: -57.85 B/s (using 91 data points, chi2=0.04)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,696 | INFO     | could have reported an average CPU frequency of 3885 MHz (7 samples)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | ..............................
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . Timing measurements:
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . get job = 0 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . initial setup = 1 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . payload setup = 3 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . stage-in = 0 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . payload execution = 7128 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . stage-out = 0 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | . log creation = 0 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,697 | INFO     | ..............................
[2026-01-09 06:15:21] 2026-01-09 05:14:22,902 | INFO     | time since job start (7156s) is within the limit (174528.0s)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | 
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | job summary report
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | --------------------------------------------------
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | PanDA job id: 6963079307
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | task id: 47898826
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | errors: (none)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | pilot state: finished 
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | transexitcode: 0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | exeerrorcode: 0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | exeerrordiag: 
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | exitcode: 0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | exitmsg: OK
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | cpuconsumptiontime: 20780 s
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | nevents: 400
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | neventsw: 0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | pid: 1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | pgrp: 1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:22,979 | INFO     | corecount: 3
[2026-01-09 06:15:21] 2026-01-09 05:14:22,980 | INFO     | event service: False
[2026-01-09 06:15:21] 2026-01-09 05:14:22,980 | INFO     | sizes: {0: 2283801, 1: 2284000, 3: 2284262, 11: 2284290, 7135: 2311756, 7136: 2320944, 7144: 2321082}
[2026-01-09 06:15:21] 2026-01-09 05:14:22,980 | INFO     | --------------------------------------------------
[2026-01-09 06:15:21] 2026-01-09 05:14:22,980 | INFO     | 
[2026-01-09 06:15:21] 2026-01-09 05:14:22,980 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | job 6963079307 has completed (purged errors)
[2026-01-09 06:15:21] 2026-01-09 05:14:22,993 | INFO     | overall cleanup function is called
[2026-01-09 06:15:21] 2026-01-09 05:14:23,999 | INFO     | --- collectZombieJob: --- 10, [1914218]
[2026-01-09 06:15:21] 2026-01-09 05:14:23,999 | INFO     | zombie collector waiting for pid 1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:23,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:15:21] 2026-01-09 05:14:23,999 | INFO     | collected zombie processes
[2026-01-09 06:15:21] 2026-01-09 05:14:23,999 | INFO     | will attempt to kill all subprocesses of pid=1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:24,046 | INFO     | process IDs to be killed: [1914218] (in reverse order)
[2026-01-09 06:15:21] 2026-01-09 05:14:24,071 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:15:21] 2026-01-09 05:14:24,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:15:21] 2026-01-09 05:14:24,073 | INFO     | did not find any defunct processes belonging to 1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:24,074 | INFO     | did not find any defunct processes belonging to 1914218
[2026-01-09 06:15:21] 2026-01-09 05:14:24,074 | INFO     | ready for new job
[2026-01-09 06:15:21] 2026-01-09 05:14:24,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | ***************************************
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | ***************************************
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | 
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | architecture information:
[2026-01-09 06:15:21] 2026-01-09 05:14:24,075 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:15:21] 2026-01-09 05:14:24,084 | INFO     | cat /etc/os-release:
[2026-01-09 06:15:21] NAME="CentOS Linux"
[2026-01-09 06:15:21] VERSION="7 (Core)"
[2026-01-09 06:15:21] ID="centos"
[2026-01-09 06:15:21] ID_LIKE="rhel fedora"
[2026-01-09 06:15:21] VERSION_ID="7"
[2026-01-09 06:15:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:15:21] ANSI_COLOR="0;31"
[2026-01-09 06:15:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:15:21] HOME_URL="https://www.centos.org/"
[2026-01-09 06:15:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:15:21] 
[2026-01-09 06:15:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:15:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:15:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:15:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:15:21] 
[2026-01-09 06:15:21] 2026-01-09 05:14:24,084 | INFO     | ***************************************
[2026-01-09 06:15:21] 2026-01-09 05:14:24,587 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | INFO     | sufficient remaining disk space (378685882368 B)
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | INFO     | update_server=False
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:15:21] 2026-01-09 05:14:24,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:15:21] 2026-01-09 05:14:24,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:15:21] 2026-01-09 05:14:24,813 | INFO     | all data control threads have been joined
[2026-01-09 06:15:21] 2026-01-09 05:14:24,835 | INFO     | all payload control threads have been joined
[2026-01-09 06:15:21] 2026-01-09 05:14:25,073 | INFO     | all job control threads have been joined
[2026-01-09 06:15:21] 2026-01-09 05:14:25,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:15:21] 2026-01-09 05:14:25,560 | INFO     | aborting loop
[2026-01-09 06:15:21] 2026-01-09 05:14:25,602 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:25,602 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:25,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:15:21] 2026-01-09 05:14:25,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:15:21] 2026-01-09 05:14:25,818 | INFO     | [data] control thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:25,840 | INFO     | [payload] control thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:26,059 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:26,078 | INFO     | [job] control thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:26,437 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:26,550 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:26,563 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:27,015 | INFO     | [job] validate thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:27,064 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:27,069 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:27,099 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:27,759 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:29,782 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:14:34,764 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:15:21] 2026-01-09 05:14:35,768 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:15:21] 2026-01-09 05:15:05,261 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-01-09 06:15:21] 2026-01-09 05:15:14,489 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:15:21] 2026-01-09 05:15:16,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752118720320)>', '<ExcThread(monitor, started 139751189378816)>']
[2026-01-09 06:15:21] 2026-01-09 05:15:16,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:15:21] 2026-01-09 05:15:16,854 | INFO     | [monitor] control thread has ended
[2026-01-09 06:15:21] 2026-01-09 05:15:21,493 | INFO     | all workflow threads have been joined
[2026-01-09 06:15:21] 2026-01-09 05:15:21,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:15:21] 2026-01-09 05:15:21,493 | INFO     | traces error code: 0
[2026-01-09 06:15:21] 2026-01-09 05:15:21,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:15:21] 2026-01-09 05:15:21,825 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:15:21] 2026-01-09 05:15:21,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:15:21] 2026-01-09 05:15:21,830 [wrapper] pilotpid: 1907765
[2026-01-09 06:15:21] 2026-01-09 05:15:21,832 [wrapper] Pilot exit status: 0
[2026-01-09 06:15:21] 2026-01-09 05:15:21,840 [wrapper] pandaids: 6963079307
[2026-01-09 06:15:21] 2026-01-09 05:15:21,859 [wrapper] cleanup supervisor_pilot 1932949 1907766
[2026-01-09 06:15:21] 2026-01-09 05:15:21,862 [wrapper] Test setup, not cleaning
[2026-01-09 06:15:21] 2026-01-09 05:15:21,864 [wrapper] apfmon messages muted
[2026-01-09 06:15:21] 2026-01-09 05:15:21,866 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:15:21] 2026-01-09 05:15:21,869 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:15:21]  *** Error codes and diagnostics ***
[2026-01-09 06:15:21]     "exeErrorCode": 0,
[2026-01-09 06:15:21]     "exeErrorDiag": "",
[2026-01-09 06:15:21]     "pilotErrorCode": 0,
[2026-01-09 06:15:21]     "pilotErrorDiag": "",
[2026-01-09 06:15:21]  *** Listing of results directory ***
[2026-01-09 06:15:21] total 445696
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 06:15:21] -rwx------ 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc       100 Jan  9 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:15:21] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 04:15 run_atlas
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc       105 Jan  9 04:15 job.xml
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc 225234685 Jan  9 04:15 EVNT.47898824._000987.pool.root.1
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc    592400 Jan  9 04:15 input.tar.gz
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:15 start_atlas.sh
[2026-01-09 06:15:21] drwxrwx--x 2 boinc boinc      4096 Jan  9 04:15 shared
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 04:15 boinc_setup_complete
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc      6448 Jan  9 04:15 init_data.xml
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 04:15 boinc_lockfile
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc      2519 Jan  9 04:15 pandaJob.out
[2026-01-09 06:15:21] -rw------- 1 boinc boinc    989771 Jan  9 04:15 agis_schedconf.cvmfs.json
[2026-01-09 06:15:21] -rw------- 1 boinc boinc   1516240 Jan  9 04:15 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:15:21] drwx------ 5 boinc boinc      4096 Jan  9 04:15 pilot3
[2026-01-09 06:15:21] -rw------- 1 boinc boinc        95 Jan  9 06:13 pilot_heartbeat.json
[2026-01-09 06:15:21] -rw------- 1 boinc boinc 224623597 Jan  9 06:13 HITS.47898826._025057.pool.root.1
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc       529 Jan  9 06:13 boinc_task_state.xml
[2026-01-09 06:15:21] -rw------- 1 boinc boinc      1037 Jan  9 06:14 memory_monitor_summary.json
[2026-01-09 06:15:21] -rw------- 1 boinc boinc    278857 Jan  9 06:14 log.47898826._025057.job.log.tgz.1
[2026-01-09 06:15:21] -rw------- 1 boinc boinc      7787 Jan  9 06:14 heartbeat.json
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc      8192 Jan  9 06:15 boinc_mmap_file
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc        27 Jan  9 06:15 wrapper_checkpoint.txt
[2026-01-09 06:15:21] -rw------- 1 boinc boinc      4628 Jan  9 06:15 pilotlog.txt
[2026-01-09 06:15:21] -rw------- 1 boinc boinc   1028299 Jan  9 06:15 log.47898826._025057.job.log.1
[2026-01-09 06:15:21] -rw------- 1 boinc boinc       357 Jan  9 06:15 output.list
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc       620 Jan  9 06:15 runtime_log
[2026-01-09 06:15:21] -rw------- 1 boinc boinc   1331200 Jan  9 06:15 result.tar.gz
[2026-01-09 06:15:21] -rw------- 1 boinc boinc       669 Jan  9 06:15 tl3NDmv52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKSkKDmpJAsGn.diag
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc      8917 Jan  9 06:15 runtime_log.err
[2026-01-09 06:15:21] -rw-r--r-- 1 boinc boinc     21284 Jan  9 06:15 stderr.txt
[2026-01-09 06:15:21] HITS file was successfully produced:
[2026-01-09 06:15:21] -rw------- 1 boinc boinc 224623597 Jan  9 06:13 shared/HITS.pool.root.1
[2026-01-09 06:15:21]  *** Contents of shared directory: ***
[2026-01-09 06:15:21] total 441220
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc 225234685 Jan  9 04:15 ATLAS.root_0
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc    592400 Jan  9 04:15 input.tar.gz
[2026-01-09 06:15:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:15 start_atlas.sh
[2026-01-09 06:15:21] -rw------- 1 boinc boinc 224623597 Jan  9 06:13 HITS.pool.root.1
[2026-01-09 06:15:21] -rw------- 1 boinc boinc   1331200 Jan  9 06:15 result.tar.gz
06:15:23 (1904036): run_atlas exited; CPU time 20761.580122
06:15:23 (1904036): called boinc_finish(0)

</stderr_txt>
]]>

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