Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:15:55 (2867373): wrapper (7.7.26015): starting
16:15:55 (2867373): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 16:15:55] Arguments: --nthreads 12
[2026-01-08 16:15:55] Threads: 12
[2026-01-08 16:15:55] Checking for CVMFS
[2026-01-08 16:15:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:15:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:15:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:15:56] 2.13.0.0 2697806 428 73516 154911 1 56 5035335 6144000 0 130560 0 498965 99.993 23256 787 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 16:15:56] CVMFS is ok
[2026-01-08 16:15:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 16:15:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 16:15:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 16:15:56] Further information can be found at the LHC@home message board.
[2026-01-08 16:15:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:15:56] Checking for apptainer binary...
[2026-01-08 16:15:56] apptainer is not installed, using version from CVMFS
[2026-01-08 16:15:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:15:56] Debian-bookworm-latest-amd64-base
[2026-01-08 16:15:56] apptainer works
[2026-01-08 16:15:56] Set ATHENA_PROC_NUMBER=12
[2026-01-08 16:15:56] Set ATHENA_CORE_NUMBER=12
[2026-01-08 16:15:56] Starting ATLAS job with PandaID=6963078590
[2026-01-08 16:15:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:17:13]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:17:13] 2026-01-08 16:15:58,658 | INFO     |  -- lfn=log.47898826._024749.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 17:17:13] 2026-01-08 16:15:58,658 | INFO     | stage-out finished correctly
[2026-01-08 17:17:13] 2026-01-08 16:15:58,975 | INFO     | time since job start (3596s) is within the limit (174528.0s)
[2026-01-08 17:17:13] 2026-01-08 16:16:00,979 | INFO     | time since job start (3598s) is within the limit (174528.0s)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,341 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 17:17:13] 2026-01-08 16:16:01,545 | INFO     | job 6963078590 has state=finished
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | preparing for final server update for job 6963078590 in state='finished'
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | this job has now completed (state=finished)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | log transfer has been attempted: DONE
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | job 6963078590 has finished - writing final server update
[2026-01-08 17:17:13] 2026-01-08 16:16:01,546 | INFO     | total number of processed events: 400 (read)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,547 | INFO     | executing command: lscpu
[2026-01-08 17:17:13] 2026-01-08 16:16:01,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 17:17:13] 2026-01-08 16:16:01,814 | WARNING  | process 2877952 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 17:17:13] 2026-01-08 16:16:01,814 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | WARNING  | maxPSS not found in memory monitor output
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4636977 B
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15606 B
[2026-01-08 17:17:13] 2026-01-08 16:16:01,815 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-08 17:17:13] 2026-01-08 16:16:02,983 | INFO     | time since job start (3600s) is within the limit (174528.0s)
[2026-01-08 17:17:13] 2026-01-08 16:16:04,986 | INFO     | time since job start (3602s) is within the limit (174528.0s)
[2026-01-08 17:17:13] 2026-01-08 16:16:06,991 | INFO     | time since job start (3604s) is within the limit (174528.0s)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,476 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 17:17:13] 2026-01-08 16:16:07,480 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3912.971875
[2026-01-08 17:17:13] 2026-01-08 16:16:07,482 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,483 | INFO     | extracted standard info from prmon json
[2026-01-08 17:17:13] 2026-01-08 16:16:07,483 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:17:13] 2026-01-08 16:16:07,483 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:17:13] 2026-01-08 16:16:07,483 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:17:13] 2026-01-08 16:16:07,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | sum of square deviations: 43584073.0
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | sum of deviations: 589410883.5
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | mean x: 1767887241.5
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | mean y: 2894712.326923077
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | intersect: -23905196230.45607
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | chi2: 0.0004081965003523209
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | current memory leak: 13.52 B/s (using 52 data points, chi2=0.00)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | could have reported an average CPU frequency of 3953 MHz (5 samples)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | ..............................
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | . Timing measurements:
[2026-01-08 17:17:13] 2026-01-08 16:16:07,484 | INFO     | . get job = 0 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . initial setup = 1 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . payload setup = 2 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . stage-in = 0 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . payload execution = 3576 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . stage-out = 0 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | . log creation = 0 s
[2026-01-08 17:17:13] 2026-01-08 16:16:07,485 | INFO     | ..............................
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | sufficient remaining disk space (710677626880 B)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590: 4926020 B (within 4404019200 B limit)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590/HITS.47898826._024749.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | total size of present files: 0 B (workdir size: 4926020 B)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,487 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-6963078590/HITS.47898826._024749.pool.root.1 since it does not exist
[2026-01-08 17:17:13] 2026-01-08 16:16:07,593 | INFO     | number of running child processes to parent process 2877952: 1
[2026-01-08 17:17:13] 2026-01-08 16:16:07,594 | INFO     | maximum number of monitored processes: 6
[2026-01-08 17:17:13] 2026-01-08 16:16:07,594 | INFO     | aborting job monitoring since job object (job id=6963078590) has expired
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | 
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | job summary report
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | --------------------------------------------------
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | PanDA job id: 6963078590
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | task id: 47898826
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | errors: (none)
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:17:13] 2026-01-08 16:16:07,999 | INFO     | pilot state: finished 
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | transexitcode: 0
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | exeerrorcode: 0
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | exeerrordiag: 
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | exitcode: 0
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | exitmsg: OK
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | cpuconsumptiontime: 39504 s
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | nevents: 400
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | neventsw: 0
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | pid: 2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | pgrp: 2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | corecount: 12
[2026-01-08 17:17:13] 2026-01-08 16:16:08,000 | INFO     | event service: False
[2026-01-08 17:17:13] 2026-01-08 16:16:08,001 | INFO     | sizes: {0: 2283976, 2: 2284238, 11: 2284266, 3583: 2319013, 3586: 2319013, 3592: 2319267}
[2026-01-08 17:17:13] 2026-01-08 16:16:08,001 | INFO     | --------------------------------------------------
[2026-01-08 17:17:13] 2026-01-08 16:16:08,001 | INFO     | 
[2026-01-08 17:17:13] 2026-01-08 16:16:08,001 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-08 17:17:13] 2026-01-08 16:16:08,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:17:13] 2026-01-08 16:16:08,018 | INFO     | job 6963078590 has completed (purged errors)
[2026-01-08 17:17:13] 2026-01-08 16:16:08,018 | INFO     | overall cleanup function is called
[2026-01-08 17:17:13] 2026-01-08 16:16:08,066 | INFO     | PID=2871159 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:17:13] 2026-01-08 16:16:09,026 | INFO     | --- collectZombieJob: --- 10, [2877952]
[2026-01-08 17:17:13] 2026-01-08 16:16:09,026 | INFO     | zombie collector waiting for pid 2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:09,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:17:13] 2026-01-08 16:16:09,026 | INFO     | collected zombie processes
[2026-01-08 17:17:13] 2026-01-08 16:16:09,026 | INFO     | will attempt to kill all subprocesses of pid=2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:09,100 | INFO     | process IDs to be killed: [2877952] (in reverse order)
[2026-01-08 17:17:13] 2026-01-08 16:16:09,129 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:17:13] 2026-01-08 16:16:09,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:17:13] 2026-01-08 16:16:09,130 | INFO     | did not find any defunct processes belonging to 2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:09,131 | INFO     | did not find any defunct processes belonging to 2877952
[2026-01-08 17:17:13] 2026-01-08 16:16:09,131 | INFO     | ready for new job
[2026-01-08 17:17:13] 2026-01-08 16:16:09,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:17:13] 2026-01-08 16:16:09,132 | INFO     | ***************************************
[2026-01-08 17:17:13] 2026-01-08 16:16:09,132 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:17:13] 2026-01-08 16:16:09,132 | INFO     | ***************************************
[2026-01-08 17:17:13] 2026-01-08 16:16:09,132 | INFO     | 
[2026-01-08 17:17:13] 2026-01-08 16:16:09,133 | INFO     | architecture information:
[2026-01-08 17:17:13] 2026-01-08 16:16:09,133 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:17:13] 2026-01-08 16:16:09,143 | INFO     | cat /etc/os-release:
[2026-01-08 17:17:13] NAME="CentOS Linux"
[2026-01-08 17:17:13] VERSION="7 (Core)"
[2026-01-08 17:17:13] ID="centos"
[2026-01-08 17:17:13] ID_LIKE="rhel fedora"
[2026-01-08 17:17:13] VERSION_ID="7"
[2026-01-08 17:17:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:17:13] ANSI_COLOR="0;31"
[2026-01-08 17:17:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:17:13] HOME_URL="https://www.centos.org/"
[2026-01-08 17:17:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:17:13] 
[2026-01-08 17:17:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:17:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:17:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:17:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:17:13] 
[2026-01-08 17:17:13] 2026-01-08 16:16:09,143 | INFO     | ***************************************
[2026-01-08 17:17:13] 2026-01-08 16:16:09,646 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-08 17:17:13] 2026-01-08 16:16:09,659 | INFO     | sufficient remaining disk space (710682869760 B)
[2026-01-08 17:17:13] 2026-01-08 16:16:09,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:17:13] 2026-01-08 16:16:09,660 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:17:13] 2026-01-08 16:16:09,660 | INFO     | update_server=False
[2026-01-08 17:17:13] 2026-01-08 16:16:09,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:17:13] 2026-01-08 16:16:09,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:17:13] 2026-01-08 16:16:10,097 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:17:13] 2026-01-08 16:16:10,097 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:17:13] 2026-01-08 16:16:10,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:17:13] 2026-01-08 16:16:10,097 | INFO     | will abort loop
[2026-01-08 17:17:13] 2026-01-08 16:16:10,243 | INFO     | all job control threads have been joined
[2026-01-08 17:17:13] 2026-01-08 16:16:10,433 | INFO     | all data control threads have been joined
[2026-01-08 17:17:13] 2026-01-08 16:16:10,665 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:10,734 | INFO     | all payload control threads have been joined
[2026-01-08 17:17:13] 2026-01-08 16:16:11,102 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,223 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,248 | INFO     | [job] control thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,438 | INFO     | [data] control thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,463 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,500 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,664 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,739 | INFO     | [payload] control thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,797 | INFO     | [job] validate thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:11,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:17:13] 2026-01-08 16:16:12,062 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:12,065 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:12,073 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:12,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:17:13] 2026-01-08 16:16:13,551 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:15,966 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:19,921 | INFO     | job.realtimelogging is not enabled
[2026-01-08 17:17:13] 2026-01-08 16:16:20,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:17:13] 2026-01-08 16:16:40,217 | INFO     | PID=2871159 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:17:13] 2026-01-08 16:16:40,218 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:17:13] 2026-01-08 16:16:40,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:17:13] 2026-01-08 16:16:40,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:17:13] 2026-01-08 16:17:07,909 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:17:13] 2026-01-08 16:17:08,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866812090176)>', '<ExcThread(monitor, started 139866146862848)>']
[2026-01-08 17:17:13] 2026-01-08 16:17:08,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:17:13] 2026-01-08 16:17:08,341 | INFO     | [monitor] control thread has ended
[2026-01-08 17:17:13] 2026-01-08 16:17:13,214 | INFO     | all workflow threads have been joined
[2026-01-08 17:17:13] 2026-01-08 16:17:13,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:17:13] 2026-01-08 16:17:13,214 | INFO     | traces error code: 0
[2026-01-08 17:17:13] 2026-01-08 16:17:13,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:17:13] 2026-01-08 16:17:13,285 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:17:13] 2026-01-08 16:17:13,286 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:17:13] 2026-01-08 16:17:13,288 [wrapper] pilotpid: 2871159
[2026-01-08 17:17:13] 2026-01-08 16:17:13,289 [wrapper] Pilot exit status: 0
[2026-01-08 17:17:13] 2026-01-08 16:17:13,294 [wrapper] pandaids: 6963078590
[2026-01-08 17:17:13] 2026-01-08 16:17:13,308 [wrapper] cleanup supervisor_pilot 2888515 2871160
[2026-01-08 17:17:13] 2026-01-08 16:17:13,310 [wrapper] Test setup, not cleaning
[2026-01-08 17:17:13] 2026-01-08 16:17:13,311 [wrapper] apfmon messages muted
[2026-01-08 17:17:13] 2026-01-08 16:17:13,312 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:17:13] 2026-01-08 16:17:13,314 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:17:13]  *** Error codes and diagnostics ***
[2026-01-08 17:17:13]     "exeErrorCode": 0,
[2026-01-08 17:17:13]     "exeErrorDiag": "",
[2026-01-08 17:17:13]     "pilotErrorCode": 0,
[2026-01-08 17:17:13]     "pilotErrorDiag": "",
[2026-01-08 17:17:13]  *** Listing of results directory ***
[2026-01-08 17:17:13] total 448480
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-08 17:17:13] -rwx------ 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc       100 Jan  8 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:17:13] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 16:15 run_atlas
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc       105 Jan  8 16:15 job.xml
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc 226734274 Jan  8 16:15 EVNT.47898824._000974.pool.root.1
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc     15847 Jan  8 16:15 start_atlas.sh
[2026-01-08 17:17:13] drwxrwx--x 2 boinc boinc      4096 Jan  8 16:15 shared
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc    592399 Jan  8 16:15 input.tar.gz
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc      6726 Jan  8 16:15 init_data.xml
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc         0 Jan  8 16:15 boinc_lockfile
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc      2519 Jan  8 16:15 pandaJob.out
[2026-01-08 17:17:13] -rw------- 1 boinc boinc    989835 Jan  8 16:16 agis_schedconf.cvmfs.json
[2026-01-08 17:17:13] -rw------- 1 boinc boinc   1516240 Jan  8 16:16 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:17:13] drwx------ 5 boinc boinc      4096 Jan  8 16:16 pilot3
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc       529 Jan  8 17:15 boinc_task_state.xml
[2026-01-08 17:17:13] -rw------- 1 boinc boinc 226750485 Jan  8 17:15 HITS.47898826._024749.pool.root.1
[2026-01-08 17:17:13] -rw------- 1 boinc boinc        95 Jan  8 17:15 pilot_heartbeat.json
[2026-01-08 17:17:13] -rw------- 1 boinc boinc      1010 Jan  8 17:15 memory_monitor_summary.json
[2026-01-08 17:17:13] -rw------- 1 boinc boinc    382042 Jan  8 17:15 log.47898826._024749.job.log.tgz.1
[2026-01-08 17:17:13] -rw------- 1 boinc boinc      7773 Jan  8 17:16 heartbeat.json
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc      8192 Jan  8 17:17 boinc_mmap_file
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc        27 Jan  8 17:17 wrapper_checkpoint.txt
[2026-01-08 17:17:13] -rw------- 1 boinc boinc      5014 Jan  8 17:17 pilotlog.txt
[2026-01-08 17:17:13] -rw------- 1 boinc boinc    536000 Jan  8 17:17 log.47898826._024749.job.log.1
[2026-01-08 17:17:13] -rw------- 1 boinc boinc       357 Jan  8 17:17 output.list
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc       620 Jan  8 17:17 runtime_log
[2026-01-08 17:17:13] -rw------- 1 boinc boinc    942080 Jan  8 17:17 result.tar.gz
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc      9132 Jan  8 17:17 runtime_log.err
[2026-01-08 17:17:13] -rw------- 1 boinc boinc       706 Jan  8 17:17 ByzMDmj52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyPkKDmSeWKbn.diag
[2026-01-08 17:17:13] -rw-r--r-- 1 boinc boinc     22673 Jan  8 17:17 stderr.txt
[2026-01-08 17:17:13] HITS file was successfully produced:
[2026-01-08 17:17:13] -rw------- 1 boinc boinc 226750485 Jan  8 17:15 shared/HITS.pool.root.1
[2026-01-08 17:17:13]  *** Contents of shared directory: ***
[2026-01-08 17:17:13] total 444388
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc 226734274 Jan  8 16:15 ATLAS.root_0
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc     15847 Jan  8 16:15 start_atlas.sh
[2026-01-08 17:17:13] -rw-r--r-- 2 boinc boinc    592399 Jan  8 16:15 input.tar.gz
[2026-01-08 17:17:13] -rw------- 1 boinc boinc 226750485 Jan  8 17:15 HITS.pool.root.1
[2026-01-08 17:17:13] -rw------- 1 boinc boinc    942080 Jan  8 17:17 result.tar.gz
17:17:14 (2867373): run_atlas exited; CPU time 39525.276507
17:17:14 (2867373): called boinc_finish(0)

</stderr_txt>
]]>

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