Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:39 (13945): wrapper (7.7.26015): starting
10:18:39 (13945): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 10:18:39] Arguments: --nthreads 12
[2026-01-08 10:18:39] Threads: 12
[2026-01-08 10:18:39] Checking for CVMFS
[2026-01-08 10:18:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 10:18:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 10:18:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 10:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 10:18:40] 2.11.2.0 2933 349772 97196 154912 0 56 11074785 20275200 1 130560 2 147301398 99.946 21410123 16923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 10:18:40] CVMFS is ok
[2026-01-08 10:18:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 10:18:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 10:18:40] Further information can be found at the LHC@home message board.
[2026-01-08 10:18:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 10:18:40] Checking for apptainer binary...
[2026-01-08 10:18:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 10:18:40] Running /usr/bin/apptainer --version
[2026-01-08 10:18:40] apptainer version 1.3.2-1.el7
[2026-01-08 10:18:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 10:18:41] c-205-15.aglt2.org
[2026-01-08 10:18:41] apptainer works
[2026-01-08 10:18:41] Set ATHENA_PROC_NUMBER=12
[2026-01-08 10:18:41] Set ATHENA_CORE_NUMBER=12
[2026-01-08 10:18:41] Starting ATLAS job with PandaID=6963078581
[2026-01-08 10:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:58:11]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:58:11]  protocol_id=None
[2026-01-08 11:58:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-08 11:58:11]  replicas=None
[2026-01-08 11:58:11]  scope=mc23_13p6TeV
[2026-01-08 11:58:11]  status=None
[2026-01-08 11:58:11]  status_code=0
[2026-01-08 11:58:11]  storage_token=
[2026-01-08 11:58:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963078581/log.47898826._024740.job.log.tgz.1
[2026-01-08 11:58:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/03/log.47898826._024740.job.log.tgz.1
[2026-01-08 11:58:11]  workdir=None
[2026-01-08 11:58:11] ]
[2026-01-08 11:58:11] 2026-01-08 16:57:10,680 | INFO     | transferring file log.47898826._024740.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963078581/log.47898826._024740.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 11:58:11] 2026-01-08 16:57:10,680 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963078581/log.47898826._024740.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._024740.job
[2026-01-08 11:58:11] 2026-01-08 16:57:10,700 | INFO     | adding to output.list: log.47898826._024740.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/03/log.47898826._024740.job.log.tg
[2026-01-08 11:58:11] 2026-01-08 16:57:10,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 11:58:11] 2026-01-08 16:57:10,701 | INFO     | summary of transferred files:
[2026-01-08 11:58:11] 2026-01-08 16:57:10,702 | INFO     |  -- lfn=log.47898826._024740.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 11:58:11] 2026-01-08 16:57:10,702 | INFO     | stage-out finished correctly
[2026-01-08 11:58:11] 2026-01-08 16:57:10,825 | INFO     | time since job start (5894s) is within the limit (174528.0s)
[2026-01-08 11:58:11] 2026-01-08 16:57:12,820 | INFO     | monitor loop #436: job 0:6963078581 is in state 'finished'
[2026-01-08 11:58:11] 2026-01-08 16:57:12,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:58:11] 2026-01-08 16:57:12,894 | INFO     | time since job start (5896s) is within the limit (174528.0s)
[2026-01-08 11:58:11] 2026-01-08 16:57:13,875 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 11:58:11] 2026-01-08 16:57:14,909 | INFO     | time since job start (5898s) is within the limit (174528.0s)
[2026-01-08 11:58:11] 2026-01-08 16:57:15,324 | INFO     | monitor loop #437: job 0:6963078581 is in state 'finished'
[2026-01-08 11:58:11] 2026-01-08 16:57:15,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:58:11] 2026-01-08 16:57:15,473 | INFO     | job 6963078581 has state=finished
[2026-01-08 11:58:11] 2026-01-08 16:57:15,473 | INFO     | preparing for final server update for job 6963078581 in state='finished'
[2026-01-08 11:58:11] 2026-01-08 16:57:15,474 | INFO     | this job has now completed (state=finished)
[2026-01-08 11:58:11] 2026-01-08 16:57:15,474 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 11:58:11] 2026-01-08 16:57:15,474 | INFO     | log transfer has been attempted: DONE
[2026-01-08 11:58:11] 2026-01-08 16:57:15,474 | INFO     | job 6963078581 has finished - writing final server update
[2026-01-08 11:58:11] 2026-01-08 16:57:15,474 | INFO     | total number of processed events: 400 (read)
[2026-01-08 11:58:11] 2026-01-08 16:57:15,475 | INFO     | executing command: lscpu
[2026-01-08 11:58:11] 2026-01-08 16:57:15,499 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 11:58:11] 2026-01-08 16:57:16,916 | INFO     | time since job start (5900s) is within the limit (174528.0s)
[2026-01-08 11:58:11] 2026-01-08 16:57:17,827 | INFO     | monitor loop #438: job 0:6963078581 is in state 'finished'
[2026-01-08 11:58:11] 2026-01-08 16:57:17,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:58:11] 2026-01-08 16:57:18,921 | INFO     | time since job start (5902s) is within the limit (174528.0s)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,182 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 11:58:11] 2026-01-08 16:57:20,186 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-08 11:58:11] 2026-01-08 16:57:20,188 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963078581/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,189 | INFO     | extracted standard info from prmon json
[2026-01-08 11:58:11] 2026-01-08 16:57:20,189 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:58:11] 2026-01-08 16:57:20,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:58:11] 2026-01-08 16:57:20,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:58:11] 2026-01-08 16:57:20,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:58:11] 2026-01-08 16:57:20,192 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:58:11] 2026-01-08 16:57:20,192 | INFO     | sum of square deviations: 226022842.5
[2026-01-08 11:58:11] 2026-01-08 16:57:20,193 | INFO     | sum of deviations: -15414538258.499998
[2026-01-08 11:58:11] 2026-01-08 16:57:20,193 | INFO     | mean x: 1767888584.5
[2026-01-08 11:58:11] 2026-01-08 16:57:20,193 | INFO     | mean y: 2836593.033333333
[2026-01-08 11:58:11] 2026-01-08 16:57:20,193 | INFO     | intersect: 120571120405.05847
[2026-01-08 11:58:11] 2026-01-08 16:57:20,194 | INFO     | chi2: 0.07354810936563487
[2026-01-08 11:58:11] 2026-01-08 16:57:20,194 | INFO     | current memory leak: -68.20 B/s (using 90 data points, chi2=0.07)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,194 | INFO     | could have reported an average CPU frequency of 2131 MHz (7 samples)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,194 | INFO     | ..............................
[2026-01-08 11:58:11] 2026-01-08 16:57:20,194 | INFO     | . Timing measurements:
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . get job = 0 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . initial setup = 2 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . payload setup = 7 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . stage-in = 0 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . payload execution = 5866 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . stage-out = 0 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | . log creation = 0 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,195 | INFO     | ..............................
[2026-01-08 11:58:11] 2026-01-08 16:57:20,277 | INFO     | 
[2026-01-08 11:58:11] 2026-01-08 16:57:20,277 | INFO     | job summary report
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | --------------------------------------------------
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | PanDA job id: 6963078581
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | task id: 47898826
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | errors: (none)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:58:11] 2026-01-08 16:57:20,278 | INFO     | pilot state: finished 
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | transexitcode: 0
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | exeerrorcode: 0
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | exeerrordiag: 
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | exitcode: 0
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | exitmsg: OK
[2026-01-08 11:58:11] 2026-01-08 16:57:20,279 | INFO     | cpuconsumptiontime: 65023 s
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | nevents: 400
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | neventsw: 0
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | pid: 24043
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | pgrp: 24043
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | corecount: 12
[2026-01-08 11:58:11] 2026-01-08 16:57:20,280 | INFO     | event service: False
[2026-01-08 11:58:11] 2026-01-08 16:57:20,281 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 5877: 2310982, 5878: 2319980, 5881: 2320036, 5887: 2320358}
[2026-01-08 11:58:11] 2026-01-08 16:57:20,281 | INFO     | --------------------------------------------------
[2026-01-08 11:58:11] 2026-01-08 16:57:20,281 | INFO     | 
[2026-01-08 11:58:11] 2026-01-08 16:57:20,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 11:58:11] 2026-01-08 16:57:20,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:58:11] 2026-01-08 16:57:20,313 | INFO     | job 6963078581 has completed (purged errors)
[2026-01-08 11:58:11] 2026-01-08 16:57:20,314 | INFO     | overall cleanup function is called
[2026-01-08 11:58:11] 2026-01-08 16:57:21,322 | INFO     | --- collectZombieJob: --- 10, [24043]
[2026-01-08 11:58:11] 2026-01-08 16:57:21,322 | INFO     | zombie collector waiting for pid 24043
[2026-01-08 11:58:11] 2026-01-08 16:57:21,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:58:11] 2026-01-08 16:57:21,322 | INFO     | collected zombie processes
[2026-01-08 11:58:11] 2026-01-08 16:57:21,322 | INFO     | will attempt to kill all subprocesses of pid=24043
[2026-01-08 11:58:11] 2026-01-08 16:57:21,414 | INFO     | process IDs to be killed: [24043] (in reverse order)
[2026-01-08 11:58:11] 2026-01-08 16:57:21,500 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:58:11] 2026-01-08 16:57:21,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:58:11] 2026-01-08 16:57:21,504 | INFO     | did not find any defunct processes belonging to 24043
[2026-01-08 11:58:11] 2026-01-08 16:57:21,506 | INFO     | did not find any defunct processes belonging to 24043
[2026-01-08 11:58:11] 2026-01-08 16:57:21,507 | INFO     | ready for new job
[2026-01-08 11:58:11] 2026-01-08 16:57:21,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:58:11] 2026-01-08 16:57:21,508 | INFO     | ***************************************
[2026-01-08 11:58:11] 2026-01-08 16:57:21,508 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:58:11] 2026-01-08 16:57:21,508 | INFO     | ***************************************
[2026-01-08 11:58:11] 2026-01-08 16:57:21,509 | INFO     | 
[2026-01-08 11:58:11] 2026-01-08 16:57:21,509 | INFO     | architecture information:
[2026-01-08 11:58:11] 2026-01-08 16:57:21,510 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:58:11] 2026-01-08 16:57:21,525 | INFO     | cat /etc/os-release:
[2026-01-08 11:58:11] NAME="CentOS Linux"
[2026-01-08 11:58:11] VERSION="7 (Core)"
[2026-01-08 11:58:11] ID="centos"
[2026-01-08 11:58:11] ID_LIKE="rhel fedora"
[2026-01-08 11:58:11] VERSION_ID="7"
[2026-01-08 11:58:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:58:11] ANSI_COLOR="0;31"
[2026-01-08 11:58:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:58:11] HOME_URL="https://www.centos.org/"
[2026-01-08 11:58:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:58:11] 
[2026-01-08 11:58:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:58:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:58:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:58:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:58:11] 
[2026-01-08 11:58:11] 2026-01-08 16:57:21,525 | INFO     | ***************************************
[2026-01-08 11:58:11] 2026-01-08 16:57:22,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 11:58:11] 2026-01-08 16:57:22,045 | INFO     | sufficient remaining disk space (29308747776 B)
[2026-01-08 11:58:11] 2026-01-08 16:57:22,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:58:11] 2026-01-08 16:57:22,046 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:58:11] 2026-01-08 16:57:22,046 | INFO     | update_server=False
[2026-01-08 11:58:11] 2026-01-08 16:57:22,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:58:11] 2026-01-08 16:57:22,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:58:11] 2026-01-08 16:57:22,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:58:11] 2026-01-08 16:57:22,047 | INFO     | aborting loop
[2026-01-08 11:58:11] 2026-01-08 16:57:22,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:58:11] 2026-01-08 16:57:22,338 | INFO     | all data control threads have been joined
[2026-01-08 11:58:11] 2026-01-08 16:57:22,592 | INFO     | all job control threads have been joined
[2026-01-08 11:58:11] 2026-01-08 16:57:22,688 | INFO     | all payload control threads have been joined
[2026-01-08 11:58:11] 2026-01-08 16:57:23,050 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,052 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,053 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,344 | INFO     | [data] control thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,456 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,597 | INFO     | [job] validate thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,597 | INFO     | [job] control thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,619 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,656 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,664 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,694 | INFO     | [payload] control thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,739 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:23,977 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:24,053 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:24,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:58:11] 2026-01-08 16:57:28,471 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:58:11] 2026-01-08 16:57:52,100 | INFO     | PID=17628 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 11:58:11] 2026-01-08 16:57:52,100 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:58:11] 2026-01-08 16:57:52,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:58:11] 2026-01-08 16:57:52,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:58:11] 2026-01-08 16:58:05,601 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:58:11] 2026-01-08 16:58:06,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696513075008)>', '<ExcThread(monitor, started 140695771784960)>']
[2026-01-08 11:58:11] 2026-01-08 16:58:06,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:58:11] 2026-01-08 16:58:06,171 | INFO     | [monitor] control thread has ended
[2026-01-08 11:58:11] 2026-01-08 16:58:11,095 | INFO     | all workflow threads have been joined
[2026-01-08 11:58:11] 2026-01-08 16:58:11,095 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:58:11] 2026-01-08 16:58:11,100 | INFO     | traces error code: 0
[2026-01-08 11:58:11] 2026-01-08 16:58:11,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:58:11] 2026-01-08 16:58:11,190 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:58:11] 2026-01-08 16:58:11,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:58:11] 2026-01-08 16:58:11,198 [wrapper] pilotpid: 17628
[2026-01-08 11:58:11] 2026-01-08 16:58:11,201 [wrapper] Pilot exit status: 0
[2026-01-08 11:58:11] 2026-01-08 16:58:11,215 [wrapper] pandaids: 6963078581
[2026-01-08 11:58:11] 2026-01-08 16:58:11,258 [wrapper] cleanup supervisor_pilot 23179 17629
[2026-01-08 11:58:11] 2026-01-08 16:58:11,262 [wrapper] Test setup, not cleaning
[2026-01-08 11:58:11] 2026-01-08 16:58:11,265 [wrapper] apfmon messages muted
[2026-01-08 11:58:11] 2026-01-08 16:58:11,269 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:58:11] 2026-01-08 16:58:11,272 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:58:11]  *** Error codes and diagnostics ***
[2026-01-08 11:58:11]     "exeErrorCode": 0,
[2026-01-08 11:58:11]     "exeErrorDiag": "",
[2026-01-08 11:58:11]     "pilotErrorCode": 0,
[2026-01-08 11:58:11]     "pilotErrorDiag": "",
[2026-01-08 11:58:11]  *** Listing of results directory ***
[2026-01-08 11:58:11] total 440532
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 11:58:11] -rwx------ 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas       100 Jan  8 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:58:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 10:18 run_atlas
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas       105 Jan  8 10:18 job.xml
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas 226734274 Jan  8 10:18 EVNT.47898824._000974.pool.root.1
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 10:18 start_atlas.sh
[2026-01-08 11:58:11] drwxrwx--x 2 boincer umatlas      4096 Jan  8 10:18 shared
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas    592400 Jan  8 10:18 input.tar.gz
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas         0 Jan  8 10:18 boinc_lockfile
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 10:18 pandaJob.out
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas        57 Jan  8 10:18 setup.sh.local
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas    989843 Jan  8 10:18 agis_schedconf.cvmfs.json
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas   1516240 Jan  8 10:18 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:58:11] drwx------ 5 boincer umatlas      4096 Jan  8 10:18 pilot3
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas 217958254 Jan  8 11:56 HITS.47898826._024740.pool.root.1
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas      1047 Jan  8 11:57 memory_monitor_summary.json
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas       530 Jan  8 11:57 boinc_task_state.xml
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas    406480 Jan  8 11:57 log.47898826._024740.job.log.tgz.1
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas      5951 Jan  8 11:57 init_data.xml
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas        95 Jan  8 11:57 pilot_heartbeat.json
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas      7852 Jan  8 11:57 heartbeat.json
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 11:57 boinc_mmap_file
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas        27 Jan  8 11:57 wrapper_checkpoint.txt
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas      4746 Jan  8 11:58 pilotlog.txt
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas    839266 Jan  8 11:58 log.47898826._024740.job.log.1
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas       357 Jan  8 11:58 output.list
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas       620 Jan  8 11:58 runtime_log
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas   1269760 Jan  8 11:58 result.tar.gz
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas      9344 Jan  8 11:58 runtime_log.err
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas       659 Jan  8 11:58 PqoMDmj52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpPkKDmP50r7n.diag
[2026-01-08 11:58:11] -rw-r--r-- 1 boincer umatlas     21845 Jan  8 11:58 stderr.txt
[2026-01-08 11:58:11] HITS file was successfully produced:
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas 217958254 Jan  8 11:56 shared/HITS.pool.root.1
[2026-01-08 11:58:11]  *** Contents of shared directory: ***
[2026-01-08 11:58:11] total 436116
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas 226734274 Jan  8 10:18 ATLAS.root_0
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 10:18 start_atlas.sh
[2026-01-08 11:58:11] -rw-r--r-- 2 boincer umatlas    592400 Jan  8 10:18 input.tar.gz
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas 217958254 Jan  8 11:56 HITS.pool.root.1
[2026-01-08 11:58:11] -rw------- 1 boincer umatlas   1269760 Jan  8 11:58 result.tar.gz
11:58:12 (13945): run_atlas exited; CPU time 64996.691732
11:58:12 (13945): called boinc_finish(0)

</stderr_txt>
]]>

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