Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:56 (3716010): wrapper (7.7.26015): starting
12:15:56 (3716010): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:15:56] Arguments: --nthreads 8
[2026-01-08 12:15:56] Threads: 8
[2026-01-08 12:15:56] Checking for CVMFS
[2026-01-08 12:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:15:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:15:59] 2.13.3.0 9601 31527 242308 154914 0 65 20937872 32935937 10699 16776704 0 24568262 99.747 33877403 43917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 12:15:59] CVMFS is ok
[2026-01-08 12:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:15:59] Further information can be found at the LHC@home message board.
[2026-01-08 12:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:15:59] Checking for apptainer binary...
[2026-01-08 12:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:15:59] Running /usr/bin/apptainer --version
[2026-01-08 12:15:59] apptainer version 1.4.5-2.el9
[2026-01-08 12:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:16:00] c6-5-7-2.aglt2.org
[2026-01-08 12:16:00] apptainer works
[2026-01-08 12:16:00] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:16:00] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:16:01] Starting ATLAS job with PandaID=6963078054
[2026-01-08 12:16:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:37:03]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:37:03] 2026-01-08 23:35:29,947 | INFO     | time since job start (22655s) is within the limit (174528.0s)
[2026-01-08 18:37:03] 2026-01-08 23:35:29,948 | INFO     | 22664s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-08 18:37:03] 2026-01-08 23:35:30,026 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963078054/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,027 | INFO     | extracted standard info from prmon json
[2026-01-08 18:37:03] 2026-01-08 23:35:30,027 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:37:03] 2026-01-08 23:35:30,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:37:03] 2026-01-08 23:35:30,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:37:03] 2026-01-08 23:35:30,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:37:03] 2026-01-08 23:35:30,108 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:37:03] 2026-01-08 23:35:30,108 | INFO     | sum of square deviations: 15454431789.366817
[2026-01-08 18:37:03] 2026-01-08 23:35:30,145 | INFO     | sum of deviations: -76834427558.10867
[2026-01-08 18:37:03] 2026-01-08 23:35:30,145 | INFO     | mean x: 1767904074.1440217
[2026-01-08 18:37:03] 2026-01-08 23:35:30,145 | INFO     | mean y: 2502936.586956522
[2026-01-08 18:37:03] 2026-01-08 23:35:30,145 | INFO     | intersect: 8791949185.13579
[2026-01-08 18:37:03] 2026-01-08 23:35:30,146 | INFO     | chi2: 8.639342073622679
[2026-01-08 18:37:03] 2026-01-08 23:35:30,146 | INFO     | sum of square deviations: 14833134282.264452
[2026-01-08 18:37:03] 2026-01-08 23:35:30,184 | INFO     | sum of deviations: 46580839388.54544
[2026-01-08 18:37:03] 2026-01-08 23:35:30,184 | INFO     | mean x: 1767903921.6528926
[2026-01-08 18:37:03] 2026-01-08 23:35:30,184 | INFO     | mean y: 2533222.5757575757
[2026-01-08 18:37:03] 2026-01-08 23:35:30,185 | INFO     | intersect: -5549256915.760484
[2026-01-08 18:37:03] 2026-01-08 23:35:30,185 | INFO     | chi2: 4.7781339881572835
[2026-01-08 18:37:03] 2026-01-08 23:35:30,185 | INFO     | current chi2=4.7781339881572835 (change=44.693311742502864 %)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,186 | INFO     | sum of square deviations: 14228632119.854742
[2026-01-08 18:37:03] 2026-01-08 23:35:30,188 | INFO     | sum of deviations: 45957228335.43575
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | mean x: 1767903769.150838
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | mean y: 2533065.0474860333
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | intersect: -5707640373.238864
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | chi2: 4.779951761026212
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | current chi2=4.779951761026212 (change=-0.03804357252086705 %)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,189 | INFO     | right removable region: 357
[2026-01-08 18:37:03] 2026-01-08 23:35:30,190 | INFO     | sum of square deviations: 14832989712.264448
[2026-01-08 18:37:03] 2026-01-08 23:35:30,193 | INFO     | sum of deviations: -184709262286.2148
[2026-01-08 18:37:03] 2026-01-08 23:35:30,193 | INFO     | mean x: 1767904226.6528926
[2026-01-08 18:37:03] 2026-01-08 23:35:30,193 | INFO     | mean y: 2529373.1570247933
[2026-01-08 18:37:03] 2026-01-08 23:35:30,193 | INFO     | intersect: 22017530518.053326
[2026-01-08 18:37:03] 2026-01-08 23:35:30,194 | INFO     | chi2: 5.440668805531631
[2026-01-08 18:37:03] 2026-01-08 23:35:30,194 | INFO     | current chi2=5.440668805531631 (change=37.02450071814055 %)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,194 | INFO     | sum of square deviations: 14228497858.550327
[2026-01-08 18:37:03] 2026-01-08 23:35:30,197 | INFO     | sum of deviations: -231826869944.4971
[2026-01-08 18:37:03] 2026-01-08 23:35:30,197 | INFO     | mean x: 1767904379.1536312
[2026-01-08 18:37:03] 2026-01-08 23:35:30,197 | INFO     | mean y: 2541217.5363128493
[2026-01-08 18:37:03] 2026-01-08 23:35:30,197 | INFO     | intersect: 28807250095.084198
[2026-01-08 18:37:03] 2026-01-08 23:35:30,198 | INFO     | chi2: 4.671052307531122
[2026-01-08 18:37:03] 2026-01-08 23:35:30,198 | INFO     | current chi2=4.671052307531122 (change=14.145623001679972 %)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,198 | INFO     | left removable region: 20
[2026-01-08 18:37:03] 2026-01-08 23:35:30,198 | INFO     | sum of square deviations: 11868755704.439198
[2026-01-08 18:37:03] 2026-01-08 23:35:30,201 | INFO     | sum of deviations: -114699322372.48082
[2026-01-08 18:37:03] 2026-01-08 23:35:30,201 | INFO     | mean x: 1767904348.670623
[2026-01-08 18:37:03] 2026-01-08 23:35:30,201 | INFO     | mean y: 2575254.8605341245
[2026-01-08 18:37:03] 2026-01-08 23:35:30,201 | INFO     | intersect: 17087553315.03233
[2026-01-08 18:37:03] 2026-01-08 23:35:30,201 | INFO     | chi2: 0.5727690405341586
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | current memory leak: -9.66 B/s (using 337 data points, chi2=0.57)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | could have reported an average CPU frequency of 3022 MHz (16 samples)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | ..............................
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | . Timing measurements:
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | . get job = 1 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | . initial setup = 8 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,202 | INFO     | . payload setup = 63 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,203 | INFO     | . stage-in = 0 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,203 | INFO     | . payload execution = 22426 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,203 | INFO     | . stage-out = 10 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,203 | INFO     | . log creation = 2 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,203 | INFO     | ..............................
[2026-01-08 18:37:03] 2026-01-08 23:35:30,778 | INFO     | 
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | job summary report
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | --------------------------------------------------
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | PanDA job id: 6963078054
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | task id: 47898826
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | errors: (none)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | pilot state: finished 
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | transexitcode: 0
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | exeerrorcode: 0
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | exeerrordiag: 
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | exitcode: 0
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | exitmsg: OK
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | cpuconsumptiontime: 53501 s
[2026-01-08 18:37:03] 2026-01-08 23:35:30,779 | INFO     | nevents: 400
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | neventsw: 0
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | pid: 3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | pgrp: 3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | corecount: 8
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | event service: False
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2283826, 3: 2283854, 4: 2284081, 5: 2284081, 16: 2284265, 27: 2284293, 38: 2284321, 50: 2284349, 56: 2284639, 61: 2284947, 22496
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | --------------------------------------------------
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | 
[2026-01-08 18:37:03] 2026-01-08 23:35:30,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:37:03] 2026-01-08 23:35:30,904 | INFO     | job 6963078054 has completed (purged errors)
[2026-01-08 18:37:03] 2026-01-08 23:35:30,905 | INFO     | overall cleanup function is called
[2026-01-08 18:37:03] 2026-01-08 23:35:31,917 | INFO     | --- collectZombieJob: --- 10, [3733974]
[2026-01-08 18:37:03] 2026-01-08 23:35:31,918 | INFO     | zombie collector waiting for pid 3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:31,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:37:03] 2026-01-08 23:35:31,918 | INFO     | collected zombie processes
[2026-01-08 18:37:03] 2026-01-08 23:35:31,918 | INFO     | will attempt to kill all subprocesses of pid=3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:34,959 | INFO     | PID=3721222 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 18:37:03] 2026-01-08 23:35:34,959 | INFO     | .. there are 10 such processes running
[2026-01-08 18:37:03] 2026-01-08 23:35:34,992 | INFO     | process IDs to be killed: [3733974] (in reverse order)
[2026-01-08 18:37:03] 2026-01-08 23:35:35,779 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:37:03] 2026-01-08 23:35:35,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:37:03] 2026-01-08 23:35:35,805 | INFO     | did not find any defunct processes belonging to 3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:35,907 | INFO     | did not find any defunct processes belonging to 3733974
[2026-01-08 18:37:03] 2026-01-08 23:35:35,907 | INFO     | ready for new job
[2026-01-08 18:37:03] 2026-01-08 23:35:35,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:37:03] 2026-01-08 23:35:35,942 | INFO     | ***************************************
[2026-01-08 18:37:03] 2026-01-08 23:35:35,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:37:03] 2026-01-08 23:35:35,942 | INFO     | ***************************************
[2026-01-08 18:37:03] 2026-01-08 23:35:35,942 | INFO     | 
[2026-01-08 18:37:03] 2026-01-08 23:35:35,998 | INFO     | architecture information:
[2026-01-08 18:37:03] 2026-01-08 23:35:35,999 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:37:03] 2026-01-08 23:35:36,082 | INFO     | cat /etc/os-release:
[2026-01-08 18:37:03] NAME="CentOS Linux"
[2026-01-08 18:37:03] VERSION="7 (Core)"
[2026-01-08 18:37:03] ID="centos"
[2026-01-08 18:37:03] ID_LIKE="rhel fedora"
[2026-01-08 18:37:03] VERSION_ID="7"
[2026-01-08 18:37:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:37:03] ANSI_COLOR="0;31"
[2026-01-08 18:37:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:37:03] HOME_URL="https://www.centos.org/"
[2026-01-08 18:37:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:37:03] 
[2026-01-08 18:37:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:37:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:37:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:37:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:37:03] 
[2026-01-08 18:37:03] 2026-01-08 23:35:36,082 | INFO     | ***************************************
[2026-01-08 18:37:03] 2026-01-08 23:35:36,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 18:37:03] 2026-01-08 23:35:36,702 | INFO     | sufficient remaining disk space (74964795392 B)
[2026-01-08 18:37:03] 2026-01-08 23:35:36,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:37:03] 2026-01-08 23:35:36,703 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:37:03] 2026-01-08 23:35:36,703 | INFO     | update_server=False
[2026-01-08 18:37:03] 2026-01-08 23:35:36,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:37:03] 2026-01-08 23:35:36,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:37:03] 2026-01-08 23:35:36,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:37:03] 2026-01-08 23:35:37,144 | INFO     | all data control threads have been joined
[2026-01-08 18:37:03] 2026-01-08 23:35:37,249 | INFO     | all payload control threads have been joined
[2026-01-08 18:37:03] 2026-01-08 23:35:37,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:37:03] 2026-01-08 23:35:37,469 | INFO     | aborting loop
[2026-01-08 18:37:03] 2026-01-08 23:35:37,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:37:03] 2026-01-08 23:35:37,730 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:37,730 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:37,887 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:37,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,150 | INFO     | [data] control thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,169 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,255 | INFO     | [payload] control thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,262 | INFO     | all job control threads have been joined
[2026-01-08 18:37:03] 2026-01-08 23:35:38,386 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,437 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,444 | INFO     | [job] validate thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:38,474 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:39,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:39,021 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:39,268 | INFO     | [job] control thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:39,710 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:35:40,712 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:37:03] 2026-01-08 23:36:10,924 | INFO     | PID=3721222 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 18:37:03] 2026-01-08 23:36:10,924 | INFO     | .. there are 10 such processes running
[2026-01-08 18:37:03] 2026-01-08 23:36:10,924 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:37:03] 2026-01-08 23:36:10,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:37:03] 2026-01-08 23:36:10,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:37:03] 2026-01-08 23:36:33,882 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:37:03] 2026-01-08 23:36:35,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155778389824)>', '<ExcThread(monitor, started 140155235063552)>']
[2026-01-08 18:37:03] 2026-01-08 23:36:36,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:37:03] 2026-01-08 23:36:36,106 | INFO     | [monitor] control thread has ended
[2026-01-08 18:37:03] 2026-01-08 23:36:40,129 | INFO     | all workflow threads have been joined
[2026-01-08 18:37:03] 2026-01-08 23:36:40,130 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:37:03] 2026-01-08 23:36:40,130 | INFO     | traces error code: 0
[2026-01-08 18:37:03] 2026-01-08 23:36:40,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:37:03] 2026-01-08 23:36:41,471 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:37:03] 2026-01-08 23:36:41,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:37:03] 2026-01-08 23:36:41,558 [wrapper] pilotpid: 3721222
[2026-01-08 18:37:03] 2026-01-08 23:36:41,577 [wrapper] Pilot exit status: 0
[2026-01-08 18:37:03] 2026-01-08 23:36:41,706 [wrapper] pandaids: 6963078054
[2026-01-08 18:37:03] 2026-01-08 23:36:42,466 [wrapper] cleanup supervisor_pilot  321512 3721223
[2026-01-08 18:37:03] 2026-01-08 23:36:42,478 [wrapper] Test setup, not cleaning
[2026-01-08 18:37:03] 2026-01-08 23:36:42,494 [wrapper] apfmon messages muted
[2026-01-08 18:37:03] 2026-01-08 23:36:42,517 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:37:03] 2026-01-08 23:36:42,534 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:37:03]  *** Error codes and diagnostics ***
[2026-01-08 18:37:03]     "exeErrorCode": 0,
[2026-01-08 18:37:03]     "exeErrorDiag": "",
[2026-01-08 18:37:03]     "pilotErrorCode": 0,
[2026-01-08 18:37:03]     "pilotErrorDiag": "",
[2026-01-08 18:37:03]  *** Listing of results directory ***
[2026-01-08 18:37:03] total 450744
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 18:37:03] -rwx------. 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas       100 Jan  8 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:37:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 12:15 run_atlas
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas       105 Jan  8 12:15 job.xml
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas 226468320 Jan  8 12:15 EVNT.47898824._000998.pool.root.1
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:15 start_atlas.sh
[2026-01-08 18:37:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 12:15 shared
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 12:15 input.tar.gz
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas         0 Jan  8 12:15 boinc_lockfile
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 12:16 pandaJob.out
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas        57 Jan  8 12:16 setup.sh.local
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas    989837 Jan  8 12:17 agis_schedconf.cvmfs.json
[2026-01-08 18:37:03] drwx------. 5 boincer umatlas      4096 Jan  8 12:17 pilot3
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas      6838 Jan  8 18:28 init_data.xml
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas 224309084 Jan  8 18:29 HITS.47898826._024431.pool.root.1
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas       531 Jan  8 18:30 boinc_task_state.xml
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas      1039 Jan  8 18:34 memory_monitor_summary.json
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas   1516240 Jan  8 18:34 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas    550238 Jan  8 18:34 log.47898826._024431.job.log.tgz.1
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas        95 Jan  8 18:35 pilot_heartbeat.json
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas      7822 Jan  8 18:35 heartbeat.json
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas      4824 Jan  8 18:36 pilotlog.txt
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas   2879947 Jan  8 18:36 log.47898826._024431.job.log.1
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas       357 Jan  8 18:36 output.list
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas       620 Jan  8 18:36 runtime_log
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas   3450880 Jan  8 18:36 result.tar.gz
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 18:36 runtime_log.err
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas       657 Jan  8 18:36 pniNDmX52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTPkKDmjQC4sn.diag
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 18:37 boinc_mmap_file
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas        28 Jan  8 18:37 wrapper_checkpoint.txt
[2026-01-08 18:37:03] -rw-r--r--. 1 boincer umatlas     21332 Jan  8 18:37 stderr.txt
[2026-01-08 18:37:03] HITS file was successfully produced:
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas 224309084 Jan  8 18:29 shared/HITS.pool.root.1
[2026-01-08 18:37:03]  *** Contents of shared directory: ***
[2026-01-08 18:37:03] total 444192
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas 226468320 Jan  8 12:15 ATLAS.root_0
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:15 start_atlas.sh
[2026-01-08 18:37:03] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 12:15 input.tar.gz
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas 224309084 Jan  8 18:29 HITS.pool.root.1
[2026-01-08 18:37:03] -rw-------. 1 boincer umatlas   3450880 Jan  8 18:36 result.tar.gz
18:37:05 (3716010): run_atlas exited; CPU time 54071.412791
18:37:05 (3716010): called boinc_finish(0)

</stderr_txt>
]]>

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