Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:26:06 (2639265): wrapper (7.7.26015): starting
11:26:06 (2639265): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:26:06] Arguments: --nthreads 8
[2026-01-08 11:26:06] Threads: 8
[2026-01-08 11:26:06] Checking for CVMFS
[2026-01-08 11:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:26:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:26:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:26:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:26:10] 2.13.3.0 9828 92163 323556 154914 0 160 28368754 32935937 23025 16776704 0 403919696 99.709 310246150 33317 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 11:26:10] CVMFS is ok
[2026-01-08 11:26:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:26:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:26:10] Further information can be found at the LHC@home message board.
[2026-01-08 11:26:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:26:10] Checking for apptainer binary...
[2026-01-08 11:26:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:26:10] Running /usr/bin/apptainer --version
[2026-01-08 11:26:10] apptainer version 1.4.5-2.el9
[2026-01-08 11:26:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:26:10] c-4-39.aglt2.org
[2026-01-08 11:26:10] apptainer works
[2026-01-08 11:26:10] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:26:10] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:26:10] Starting ATLAS job with PandaID=6963077954
[2026-01-08 11:26:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 20:53:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 20:53:29] 2026-01-09 01:52:48,855 | INFO     | monitor loop #1768: job 0:6963077954 is in state 'finished'
[2026-01-08 20:53:29] 2026-01-09 01:52:48,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:53:29] 2026-01-09 01:52:50,121 | INFO     | time since job start (33947s) is within the limit (174528.0s)
[2026-01-08 20:53:29] 2026-01-09 01:52:51,363 | INFO     | monitor loop #1769: job 0:6963077954 is in state 'finished'
[2026-01-08 20:53:29] 2026-01-09 01:52:51,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:53:29] 2026-01-09 01:52:52,129 | INFO     | time since job start (33949s) is within the limit (174528.0s)
[2026-01-08 20:53:29] 2026-01-09 01:52:53,670 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 20:53:29] 2026-01-09 01:52:53,723 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.154125
[2026-01-08 20:53:29] 2026-01-09 01:52:53,790 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963077954/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 20:53:29] 2026-01-09 01:52:53,791 | INFO     | extracted standard info from prmon json
[2026-01-08 20:53:29] 2026-01-09 01:52:53,791 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 20:53:29] 2026-01-09 01:52:53,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 20:53:29] 2026-01-09 01:52:53,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 20:53:29] 2026-01-09 01:52:53,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 20:53:29] 2026-01-09 01:52:53,907 | INFO     | fitting pss+swap vs Time
[2026-01-08 20:53:29] 2026-01-09 01:52:53,970 | INFO     | monitor loop #1770: job 0:6963077954 is in state 'finished'
[2026-01-08 20:53:29] 2026-01-09 01:52:53,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:53:29] 2026-01-09 01:52:53,908 | INFO     | sum of square deviations: 52724711912.158615
[2026-01-08 20:53:29] 2026-01-09 01:52:54,097 | INFO     | sum of deviations: -16407475099.451214
[2026-01-08 20:53:29] 2026-01-09 01:52:54,097 | INFO     | mean x: 1767906640.198556
[2026-01-08 20:53:29] 2026-01-09 01:52:54,097 | INFO     | mean y: 2529922.6859205775
[2026-01-08 20:53:29] 2026-01-09 01:52:54,097 | INFO     | intersect: 552687204.2570146
[2026-01-08 20:53:29] 2026-01-09 01:52:54,098 | INFO     | chi2: 3.140435343712805
[2026-01-08 20:53:29] 2026-01-09 01:52:54,099 | INFO     | sum of square deviations: 51310099858.604836
[2026-01-08 20:53:29] 2026-01-09 01:52:54,164 | INFO     | time since job start (33951s) is within the limit (174528.0s)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,165 | INFO     | sum of deviations: 18361879215.034637
[2026-01-08 20:53:29] 2026-01-09 01:52:54,165 | INFO     | mean x: 1767906487.7030966
[2026-01-08 20:53:29] 2026-01-09 01:52:54,165 | INFO     | mean y: 2533643.2149362476
[2026-01-08 20:53:29] 2026-01-09 01:52:54,166 | INFO     | intersect: -630130987.7278235
[2026-01-08 20:53:29] 2026-01-09 01:52:54,166 | INFO     | chi2: 2.4628816103891547
[2026-01-08 20:53:29] 2026-01-09 01:52:54,167 | INFO     | current chi2=2.4628816103891547 (change=21.575153097169228 %)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,167 | INFO     | right removable region: 548
[2026-01-08 20:53:29] 2026-01-09 01:52:54,168 | INFO     | sum of square deviations: 51309931254.604744
[2026-01-08 20:53:29] 2026-01-09 01:52:54,245 | INFO     | sum of deviations: -131368808863.69022
[2026-01-08 20:53:29] 2026-01-09 01:52:54,245 | INFO     | mean x: 1767906792.7030966
[2026-01-08 20:53:29] 2026-01-09 01:52:54,245 | INFO     | mean y: 2542282.8178506377
[2026-01-08 20:53:29] 2026-01-09 01:52:54,246 | INFO     | intersect: 4528913764.139801
[2026-01-08 20:53:29] 2026-01-09 01:52:54,246 | INFO     | chi2: 1.2458032100921117
[2026-01-08 20:53:29] 2026-01-09 01:52:54,247 | INFO     | current chi2=1.2458032100921117 (change=60.33023852612578 %)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,247 | INFO     | sum of square deviations: 49920719692.94129
[2026-01-08 20:53:29] 2026-01-09 01:52:54,316 | INFO     | sum of deviations: -143308338076.67648
[2026-01-08 20:53:29] 2026-01-09 01:52:54,316 | INFO     | mean x: 1767906945.2058823
[2026-01-08 20:53:29] 2026-01-09 01:52:54,316 | INFO     | mean y: 2543585.836397059
[2026-01-08 20:53:29] 2026-01-09 01:52:54,350 | INFO     | intersect: 5077706919.819602
[2026-01-08 20:53:29] 2026-01-09 01:52:54,351 | INFO     | chi2: 1.198096977266108
[2026-01-08 20:53:29] 2026-01-09 01:52:54,351 | INFO     | current chi2=1.198096977266108 (change=3.829355426245557 %)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,351 | INFO     | left removable region: 20
[2026-01-08 20:53:29] 2026-01-09 01:52:54,352 | INFO     | sum of square deviations: 45644297664.81619
[2026-01-08 20:53:29] 2026-01-09 01:52:54,378 | INFO     | sum of deviations: -86282429952.92616
[2026-01-08 20:53:29] 2026-01-09 01:52:54,379 | INFO     | mean x: 1767907067.2140152
[2026-01-08 20:53:29] 2026-01-09 01:52:54,379 | INFO     | mean y: 2544985.0170454546
[2026-01-08 20:53:29] 2026-01-09 01:52:54,379 | INFO     | intersect: 3344458991.676363
[2026-01-08 20:53:29] 2026-01-09 01:52:54,380 | INFO     | chi2: 0.47412284050386144
[2026-01-08 20:53:29] 2026-01-09 01:52:54,380 | INFO     | current memory leak: -1.89 B/s (using 528 data points, chi2=0.47)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,381 | INFO     | could have reported an average CPU frequency of 2600 MHz (22 samples)
[2026-01-08 20:53:29] 2026-01-09 01:52:54,381 | INFO     | ..............................
[2026-01-08 20:53:29] 2026-01-09 01:52:54,381 | INFO     | . Timing measurements:
[2026-01-08 20:53:29] 2026-01-09 01:52:54,381 | INFO     | . get job = 0 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . initial setup = 3 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . payload setup = 48 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . stage-in = 0 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . payload execution = 33793 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . stage-out = 7 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | . log creation = 0 s
[2026-01-08 20:53:29] 2026-01-09 01:52:54,382 | INFO     | ..............................
[2026-01-08 20:53:29] 2026-01-09 01:52:55,038 | INFO     | 
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | job summary report
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | --------------------------------------------------
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | PanDA job id: 6963077954
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | task id: 47898826
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | errors: (none)
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 20:53:29] 2026-01-09 01:52:55,039 | INFO     | pilot state: finished 
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | transexitcode: 0
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | exeerrorcode: 0
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | exeerrordiag: 
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | exitcode: 0
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | exitmsg: OK
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | cpuconsumptiontime: 70296 s
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | nevents: 400
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | neventsw: 0
[2026-01-08 20:53:29] 2026-01-09 01:52:55,040 | INFO     | pid: 2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | pgrp: 2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | corecount: 8
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | event service: False
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | sizes: {0: 2283798, 1: 2283798, 2: 2284025, 13: 2284025, 24: 2284081, 28: 2284371, 35: 2284527, 33846: 2323956, 33847: 2323955, 33854: 2333009, 33858: 2333065, 338
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | --------------------------------------------------
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | 
[2026-01-08 20:53:29] 2026-01-09 01:52:55,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 20:53:29] 2026-01-09 01:52:55,110 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 20:53:29] 2026-01-09 01:52:55,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 20:53:29] 2026-01-09 01:52:55,113 | INFO     | job 6963077954 has completed (purged errors)
[2026-01-08 20:53:29] 2026-01-09 01:52:55,114 | INFO     | overall cleanup function is called
[2026-01-08 20:53:29] 2026-01-09 01:52:56,122 | INFO     | --- collectZombieJob: --- 10, [2671270]
[2026-01-08 20:53:29] 2026-01-09 01:52:56,123 | INFO     | zombie collector waiting for pid 2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:56,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 20:53:29] 2026-01-09 01:52:56,123 | INFO     | collected zombie processes
[2026-01-08 20:53:29] 2026-01-09 01:52:56,123 | INFO     | will attempt to kill all subprocesses of pid=2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:56,995 | INFO     | process IDs to be killed: [2671270] (in reverse order)
[2026-01-08 20:53:29] 2026-01-09 01:52:57,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 20:53:29] 2026-01-09 01:52:57,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 20:53:29] 2026-01-09 01:52:57,164 | INFO     | did not find any defunct processes belonging to 2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:57,233 | INFO     | did not find any defunct processes belonging to 2671270
[2026-01-08 20:53:29] 2026-01-09 01:52:57,233 | INFO     | ready for new job
[2026-01-08 20:53:29] 2026-01-09 01:52:57,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 20:53:29] 2026-01-09 01:52:57,236 | INFO     | ***************************************
[2026-01-08 20:53:29] 2026-01-09 01:52:57,236 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 20:53:29] 2026-01-09 01:52:57,236 | INFO     | ***************************************
[2026-01-08 20:53:29] 2026-01-09 01:52:57,237 | INFO     | 
[2026-01-08 20:53:29] 2026-01-09 01:52:57,238 | INFO     | architecture information:
[2026-01-08 20:53:29] 2026-01-09 01:52:57,239 | INFO     | executing command: cat /etc/os-release
[2026-01-08 20:53:29] 2026-01-09 01:52:57,294 | INFO     | cat /etc/os-release:
[2026-01-08 20:53:29] NAME="CentOS Linux"
[2026-01-08 20:53:29] VERSION="7 (Core)"
[2026-01-08 20:53:29] ID="centos"
[2026-01-08 20:53:29] ID_LIKE="rhel fedora"
[2026-01-08 20:53:29] VERSION_ID="7"
[2026-01-08 20:53:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 20:53:29] ANSI_COLOR="0;31"
[2026-01-08 20:53:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 20:53:29] HOME_URL="https://www.centos.org/"
[2026-01-08 20:53:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 20:53:29] 
[2026-01-08 20:53:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 20:53:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 20:53:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 20:53:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 20:53:29] 
[2026-01-08 20:53:29] 2026-01-09 01:52:57,294 | INFO     | ***************************************
[2026-01-08 20:53:29] 2026-01-09 01:52:57,807 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 20:53:29] 2026-01-09 01:52:57,945 | INFO     | sufficient remaining disk space (75531026432 B)
[2026-01-08 20:53:29] 2026-01-09 01:52:57,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 20:53:29] 2026-01-09 01:52:57,946 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 20:53:29] 2026-01-09 01:52:57,946 | INFO     | update_server=False
[2026-01-08 20:53:29] 2026-01-09 01:52:57,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 20:53:29] 2026-01-09 01:52:57,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:53:29] 2026-01-09 01:52:57,957 | INFO     | aborting loop
[2026-01-08 20:53:29] 2026-01-09 01:52:58,162 | INFO     | all job control threads have been joined
[2026-01-08 20:53:29] 2026-01-09 01:52:58,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 20:53:29] 2026-01-09 01:52:58,383 | INFO     | all data control threads have been joined
[2026-01-08 20:53:29] 2026-01-09 01:52:58,551 | INFO     | all payload control threads have been joined
[2026-01-08 20:53:29] 2026-01-09 01:52:58,951 | INFO     | [job] retrieve thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:58,962 | INFO     | [job] job monitor thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,011 | INFO     | [payload] failed_post thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,168 | INFO     | [job] control thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,389 | INFO     | [data] control thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,557 | INFO     | [payload] control thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,619 | INFO     | [data] copytool_in thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,620 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:53:29] 2026-01-09 01:52:59,789 | INFO     | [job] validate thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:52:59,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 20:53:29] 2026-01-09 01:53:00,016 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:00,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:00,363 | INFO     | [data] copytool_out thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:00,521 | INFO     | [payload] validate_post thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:00,748 | INFO     | [job] queue monitor thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:03,865 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 20:53:29] 2026-01-09 01:53:08,923 | INFO     | [monitor] cgroup control has ended
[2026-01-08 20:53:29] 2026-01-09 01:53:09,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669262042944)>', '<ExcThread(monitor, started 140668601087744)>']
[2026-01-08 20:53:29] 2026-01-09 01:53:14,697 | INFO     | all workflow threads have been joined
[2026-01-08 20:53:29] 2026-01-09 01:53:14,698 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 20:53:29] 2026-01-09 01:53:14,698 | INFO     | traces error code: 0
[2026-01-08 20:53:29] 2026-01-09 01:53:14,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 20:53:29] 2026-01-09 01:53:28,179 | INFO     | PID=2654760 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | INFO     | .. there are 40 such processes running
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 20:53:29] 2026-01-09 01:53:28,180 | INFO     | [monitor] control thread has ended
[2026-01-08 20:53:29] 2026-01-09 01:53:28,742 [wrapper] ==== pilot stdout END ====
[2026-01-08 20:53:29] 2026-01-09 01:53:28,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 20:53:29] 2026-01-09 01:53:28,802 [wrapper] pilotpid: 2654760
[2026-01-08 20:53:29] 2026-01-09 01:53:28,816 [wrapper] Pilot exit status: 0
[2026-01-08 20:53:29] 2026-01-09 01:53:28,836 [wrapper] pandaids: 6963077954
[2026-01-08 20:53:29] 2026-01-09 01:53:28,977 [wrapper] cleanup supervisor_pilot 1077300 2654761
[2026-01-08 20:53:29] 2026-01-09 01:53:28,981 [wrapper] Test setup, not cleaning
[2026-01-08 20:53:29] 2026-01-09 01:53:28,984 [wrapper] apfmon messages muted
[2026-01-08 20:53:29] 2026-01-09 01:53:28,989 [wrapper] ==== wrapper stdout END ====
[2026-01-08 20:53:29] 2026-01-09 01:53:28,992 [wrapper] ==== wrapper stderr END ====
[2026-01-08 20:53:29]  *** Error codes and diagnostics ***
[2026-01-08 20:53:29]     "exeErrorCode": 0,
[2026-01-08 20:53:29]     "exeErrorDiag": "",
[2026-01-08 20:53:29]     "pilotErrorCode": 0,
[2026-01-08 20:53:29]     "pilotErrorDiag": "",
[2026-01-08 20:53:29]  *** Listing of results directory ***
[2026-01-08 20:53:29] total 449948
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 20:53:29] -rwx------. 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas       100 Jan  8 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 20:53:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 11:26 run_atlas
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas       105 Jan  8 11:26 job.xml
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas 226276240 Jan  8 11:26 EVNT.47898824._000994.pool.root.1
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:26 start_atlas.sh
[2026-01-08 20:53:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 11:26 shared
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 11:26 input.tar.gz
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas         0 Jan  8 11:26 boinc_lockfile
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 11:26 pandaJob.out
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas        57 Jan  8 11:26 setup.sh.local
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas    989837 Jan  8 11:27 agis_schedconf.cvmfs.json
[2026-01-08 20:53:29] drwx------. 5 boincer umatlas      4096 Jan  8 11:27 pilot3
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas      6658 Jan  8 20:46 init_data.xml
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas 221507579 Jan  8 20:50 HITS.47898826._024331.pool.root.1
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas       531 Jan  8 20:50 boinc_task_state.xml
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas      1047 Jan  8 20:52 memory_monitor_summary.json
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas   1516240 Jan  8 20:52 agis_ddmendpoints.agis.ALL.json
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas    669978 Jan  8 20:52 log.47898826._024331.job.log.tgz.1
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas        95 Jan  8 20:52 pilot_heartbeat.json
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas      7823 Jan  8 20:52 heartbeat.json
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 20:53 boinc_mmap_file
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas        28 Jan  8 20:53 wrapper_checkpoint.txt
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas       823 Jan  8 20:53 pilotlog.txt
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas   3855807 Jan  8 20:53 log.47898826._024331.job.log.1
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas       357 Jan  8 20:53 output.list
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas       620 Jan  8 20:53 runtime_log
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas   4546560 Jan  8 20:53 result.tar.gz
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas      9333 Jan  8 20:53 runtime_log.err
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas       656 Jan  8 20:53 Hg9MDmX52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyOkKDmiSQOzm.diag
[2026-01-08 20:53:29] -rw-r--r--. 1 boincer umatlas     21453 Jan  8 20:53 stderr.txt
[2026-01-08 20:53:29] HITS file was successfully produced:
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas 221507579 Jan  8 20:50 shared/HITS.pool.root.1
[2026-01-08 20:53:29]  *** Contents of shared directory: ***
[2026-01-08 20:53:29] total 442332
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas 226276240 Jan  8 11:26 ATLAS.root_0
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:26 start_atlas.sh
[2026-01-08 20:53:29] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 11:26 input.tar.gz
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas 221507579 Jan  8 20:50 HITS.pool.root.1
[2026-01-08 20:53:29] -rw-------. 1 boincer umatlas   4546560 Jan  8 20:53 result.tar.gz
20:53:31 (2639265): run_atlas exited; CPU time 71696.242298
20:53:31 (2639265): called boinc_finish(0)

</stderr_txt>
]]>

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