Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:00:59 (12958): wrapper (7.7.26015): starting
16:00:59 (12958): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 16:00:59] Arguments: --nthreads 8
[2026-01-08 16:00:59] Threads: 8
[2026-01-08 16:00:59] Checking for CVMFS
[2026-01-08 16:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:01:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:01:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:01:02] 2.11.2.0 7147 34127 101952 154910 2 53 24902667 25165824 1088 130560 0 14165728 99.825 9896204 3992 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 16:01:02] CVMFS is ok
[2026-01-08 16:01:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:01:02] Checking for apptainer binary...
[2026-01-08 16:01:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:01:02] Running /usr/bin/apptainer --version
[2026-01-08 16:01:02] apptainer version 1.3.2-1.el7
[2026-01-08 16:01:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:02:52] cg-vwn412.simple-grid.lan
[2026-01-08 16:02:52] apptainer works
[2026-01-08 16:02:52] Set ATHENA_PROC_NUMBER=8
[2026-01-08 16:02:52] Set ATHENA_CORE_NUMBER=8
[2026-01-08 16:02:52] Starting ATLAS job with PandaID=6963075189
[2026-01-08 16:02:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:58:03]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:58:03] 2026-01-08 20:57:29,844 | INFO     | sum of deviations: 184782496249.99997
[2026-01-08 21:58:03] 2026-01-08 20:57:29,844 | INFO     | mean x: 1767895651.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,844 | INFO     | mean y: 2457694.6396396398
[2026-01-08 21:58:03] 2026-01-08 20:57:29,844 | INFO     | intersect: -28528099224.798317
[2026-01-08 21:58:03] 2026-01-08 20:57:29,845 | INFO     | chi2: 9.767144200203896
[2026-01-08 21:58:03] 2026-01-08 20:57:29,845 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,849 | INFO     | sum of deviations: 181884368529.5
[2026-01-08 21:58:03] 2026-01-08 20:57:29,849 | INFO     | mean x: 1767895498.5
[2026-01-08 21:58:03] 2026-01-08 20:57:29,849 | INFO     | mean y: 2456824.6798780486
[2026-01-08 21:58:03] 2026-01-08 20:57:29,849 | INFO     | intersect: -29384596993.419025
[2026-01-08 21:58:03] 2026-01-08 20:57:29,850 | INFO     | chi2: 9.780264267452404
[2026-01-08 21:58:03] 2026-01-08 20:57:29,850 | INFO     | current chi2=9.780264267452404 (change=-0.13432859164948135 %)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,850 | INFO     | right removable region: 327
[2026-01-08 21:58:03] 2026-01-08 20:57:29,851 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,854 | INFO     | sum of deviations: 63716623135.49999
[2026-01-08 21:58:03] 2026-01-08 20:57:29,854 | INFO     | mean x: 1767895803.5
[2026-01-08 21:58:03] 2026-01-08 20:57:29,854 | INFO     | mean y: 2494025.3201219514
[2026-01-08 21:58:03] 2026-01-08 20:57:29,855 | INFO     | intersect: -10292201287.782648
[2026-01-08 21:58:03] 2026-01-08 20:57:29,855 | INFO     | chi2: 4.321299025824208
[2026-01-08 21:58:03] 2026-01-08 20:57:29,855 | INFO     | current chi2=4.321299025824208 (change=55.756780720673724 %)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,856 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,859 | INFO     | sum of deviations: -31936921612.000008
[2026-01-08 21:58:03] 2026-01-08 20:57:29,860 | INFO     | mean x: 1767895956.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,860 | INFO     | mean y: 2523603.609907121
[2026-01-08 21:58:03] 2026-01-08 20:57:29,860 | INFO     | intersect: 5405933657.366229
[2026-01-08 21:58:03] 2026-01-08 20:57:29,860 | INFO     | chi2: 1.1143902199369082
[2026-01-08 21:58:03] 2026-01-08 20:57:29,861 | INFO     | current chi2=1.1143902199369082 (change=74.21168465136803 %)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,861 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 21:58:03] 2026-01-08 20:57:29,865 | INFO     | sum of deviations: -72378730373.49998
[2026-01-08 21:58:03] 2026-01-08 20:57:29,865 | INFO     | mean x: 1767896108.5
[2026-01-08 21:58:03] 2026-01-08 20:57:29,865 | INFO     | mean y: 2536441.3113207547
[2026-01-08 21:58:03] 2026-01-08 20:57:29,865 | INFO     | intersect: 12835064168.26649
[2026-01-08 21:58:03] 2026-01-08 20:57:29,865 | INFO     | chi2: 0.29305322742518697
[2026-01-08 21:58:03] 2026-01-08 20:57:29,866 | INFO     | current chi2=0.29305322742518697 (change=73.70281772198447 %)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,866 | INFO     | sum of square deviations: 9508390372.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,869 | INFO     | sum of deviations: -72679509448.00002
[2026-01-08 21:58:03] 2026-01-08 20:57:29,870 | INFO     | mean x: 1767896261.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,870 | INFO     | mean y: 2536523.102236422
[2026-01-08 21:58:03] 2026-01-08 20:57:29,870 | INFO     | intersect: 13515847186.367188
[2026-01-08 21:58:03] 2026-01-08 20:57:29,870 | INFO     | chi2: 0.27387115350730623
[2026-01-08 21:58:03] 2026-01-08 20:57:29,871 | INFO     | current chi2=0.27387115350730623 (change=6.545593811205405 %)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,871 | INFO     | left removable region: 40
[2026-01-08 21:58:03] 2026-01-08 20:57:29,871 | INFO     | sum of square deviations: 7330250928.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,874 | INFO     | sum of deviations: -29976052943.999985
[2026-01-08 21:58:03] 2026-01-08 20:57:29,874 | INFO     | mean x: 1767896688.0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,874 | INFO     | mean y: 2521462.6794425086
[2026-01-08 21:58:03] 2026-01-08 20:57:29,875 | INFO     | intersect: 7232091806.115062
[2026-01-08 21:58:03] 2026-01-08 20:57:29,875 | INFO     | chi2: 0.18306089738040188
[2026-01-08 21:58:03] 2026-01-08 20:57:29,875 | INFO     | current memory leak: -4.09 B/s (using 287 data points, chi2=0.18)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,876 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,876 | INFO     | ..............................
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . Timing measurements:
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . get job = 0 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . initial setup = 10 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . payload setup = 169 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . stage-in = 0 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . payload execution = 20502 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . stage-out = 1 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | . log creation = 0 s
[2026-01-08 21:58:03] 2026-01-08 20:57:29,877 | INFO     | ..............................
[2026-01-08 21:58:03] 2026-01-08 20:57:29,998 | INFO     | 
[2026-01-08 21:58:03] 2026-01-08 20:57:29,998 | INFO     | job summary report
[2026-01-08 21:58:03] 2026-01-08 20:57:29,998 | INFO     | --------------------------------------------------
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | PanDA job id: 6963075189
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | task id: 47898826
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | errors: (none)
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | pilot state: finished 
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | transexitcode: 0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | exeerrorcode: 0
[2026-01-08 21:58:03] 2026-01-08 20:57:29,999 | INFO     | exeerrordiag: 
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | exitcode: 0
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | exitmsg: OK
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | cpuconsumptiontime: 82497 s
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | nevents: 400
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | neventsw: 0
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | pid: 23453
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | pgrp: 23453
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | corecount: 8
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | event service: False
[2026-01-08 21:58:03] 2026-01-08 20:57:30,000 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 88: 2284377, 98: 2284685, 10
[2026-01-08 21:58:03] 2026-01-08 20:57:30,001 | INFO     | --------------------------------------------------
[2026-01-08 21:58:03] 2026-01-08 20:57:30,001 | INFO     | 
[2026-01-08 21:58:03] 2026-01-08 20:57:30,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 21:58:03] 2026-01-08 20:57:30,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,035 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,035 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,035 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:58:03] 2026-01-08 20:57:30,037 | INFO     | job 6963075189 has completed (purged errors)
[2026-01-08 21:58:03] 2026-01-08 20:57:30,038 | INFO     | overall cleanup function is called
[2026-01-08 21:58:03] 2026-01-08 20:57:31,046 | INFO     | --- collectZombieJob: --- 10, [23453]
[2026-01-08 21:58:03] 2026-01-08 20:57:31,046 | INFO     | zombie collector waiting for pid 23453
[2026-01-08 21:58:03] 2026-01-08 20:57:31,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:58:03] 2026-01-08 20:57:31,047 | INFO     | collected zombie processes
[2026-01-08 21:58:03] 2026-01-08 20:57:31,047 | INFO     | will attempt to kill all subprocesses of pid=23453
[2026-01-08 21:58:03] 2026-01-08 20:57:31,116 | INFO     | process IDs to be killed: [23453] (in reverse order)
[2026-01-08 21:58:03] 2026-01-08 20:57:31,168 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:58:03] 2026-01-08 20:57:31,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:58:03] 2026-01-08 20:57:31,171 | INFO     | did not find any defunct processes belonging to 23453
[2026-01-08 21:58:03] 2026-01-08 20:57:31,172 | INFO     | did not find any defunct processes belonging to 23453
[2026-01-08 21:58:03] 2026-01-08 20:57:31,173 | INFO     | ready for new job
[2026-01-08 21:58:03] 2026-01-08 20:57:31,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:58:03] 2026-01-08 20:57:31,175 | INFO     | ***************************************
[2026-01-08 21:58:03] 2026-01-08 20:57:31,175 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:58:03] 2026-01-08 20:57:31,175 | INFO     | ***************************************
[2026-01-08 21:58:03] 2026-01-08 20:57:31,175 | INFO     | 
[2026-01-08 21:58:03] 2026-01-08 20:57:31,176 | INFO     | pilot is running in a VM
[2026-01-08 21:58:03] 2026-01-08 20:57:31,176 | INFO     | architecture information:
[2026-01-08 21:58:03] 2026-01-08 20:57:31,177 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:58:03] 2026-01-08 20:57:31,207 | INFO     | cat /etc/os-release:
[2026-01-08 21:58:03] NAME="CentOS Linux"
[2026-01-08 21:58:03] VERSION="7 (Core)"
[2026-01-08 21:58:03] ID="centos"
[2026-01-08 21:58:03] ID_LIKE="rhel fedora"
[2026-01-08 21:58:03] VERSION_ID="7"
[2026-01-08 21:58:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:58:03] ANSI_COLOR="0;31"
[2026-01-08 21:58:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:58:03] HOME_URL="https://www.centos.org/"
[2026-01-08 21:58:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:58:03] 
[2026-01-08 21:58:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:58:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:58:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:58:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:58:03] 
[2026-01-08 21:58:03] 2026-01-08 20:57:31,208 | INFO     | ***************************************
[2026-01-08 21:58:03] 2026-01-08 20:57:31,711 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 21:58:03] 2026-01-08 20:57:31,731 | INFO     | sufficient remaining disk space (497513660416 B)
[2026-01-08 21:58:03] 2026-01-08 20:57:31,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:58:03] 2026-01-08 20:57:31,732 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:58:03] 2026-01-08 20:57:31,732 | INFO     | update_server=False
[2026-01-08 21:58:03] 2026-01-08 20:57:31,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:58:03] 2026-01-08 20:57:31,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:58:03] 2026-01-08 20:57:31,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:58:03] 2026-01-08 20:57:32,033 | INFO     | all data control threads have been joined
[2026-01-08 21:58:03] 2026-01-08 20:57:32,207 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:58:03] 2026-01-08 20:57:32,208 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:58:03] 2026-01-08 20:57:32,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:58:03] 2026-01-08 20:57:32,208 | INFO     | will abort loop
[2026-01-08 21:58:03] 2026-01-08 20:57:32,738 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:32,739 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,039 | INFO     | [data] control thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,150 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,151 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,213 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,221 | INFO     | all payload control threads have been joined
[2026-01-08 21:58:03] 2026-01-08 20:57:33,341 | INFO     | all job control threads have been joined
[2026-01-08 21:58:03] 2026-01-08 20:57:33,409 | INFO     | [job] validate thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,491 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,739 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,842 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:33,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:34,195 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:34,226 | INFO     | [payload] control thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:34,347 | INFO     | [job] control thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:34,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:58:03] 2026-01-08 20:57:38,651 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:42,598 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:58:03] 2026-01-08 20:57:43,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:58:03] 2026-01-08 20:57:48,426 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:58:03] 2026-01-08 20:57:49,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978507536192)>', '<ExcThread(monitor, started 139977916659456)>']
[2026-01-08 21:58:03] 2026-01-08 20:57:54,086 | INFO     | all workflow threads have been joined
[2026-01-08 21:58:03] 2026-01-08 20:57:54,087 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:58:03] 2026-01-08 20:57:54,087 | INFO     | traces error code: 0
[2026-01-08 21:58:03] 2026-01-08 20:57:54,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:58:03] 2026-01-08 20:58:02,617 | INFO     | PID=16969 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:58:03] 2026-01-08 20:58:02,617 | INFO     | .. there are 2 such processes running
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 21:58:03] 2026-01-08 20:58:02,618 | INFO     | [monitor] control thread has ended
[2026-01-08 21:58:03] 2026-01-08 20:58:02,762 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:58:03] 2026-01-08 20:58:02,767 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:58:03] 2026-01-08 20:58:02,771 [wrapper] pilotpid: 16969
[2026-01-08 21:58:03] 2026-01-08 20:58:02,776 [wrapper] Pilot exit status: 0
[2026-01-08 21:58:03] 2026-01-08 20:58:02,799 [wrapper] pandaids: 6963075189
[2026-01-08 21:58:03] 2026-01-08 20:58:02,870 [wrapper] cleanup supervisor_pilot 31845 16970
[2026-01-08 21:58:03] 2026-01-08 20:58:02,879 [wrapper] Test setup, not cleaning
[2026-01-08 21:58:03] 2026-01-08 20:58:02,887 [wrapper] apfmon messages muted
[2026-01-08 21:58:03] 2026-01-08 20:58:02,898 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:58:03] 2026-01-08 20:58:02,902 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:58:03]  *** Error codes and diagnostics ***
[2026-01-08 21:58:03]     "exeErrorCode": 0,
[2026-01-08 21:58:03]     "exeErrorDiag": "",
[2026-01-08 21:58:03]     "pilotErrorCode": 0,
[2026-01-08 21:58:03]     "pilotErrorDiag": "",
[2026-01-08 21:58:03]  *** Listing of results directory ***
[2026-01-08 21:58:03] total 444484
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-08 21:58:03] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc       100 Jan  8 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:58:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 16:00 run_atlas
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc       105 Jan  8 16:00 job.xml
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc      6390 Jan  8 16:00 init_data.xml
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc 226450797 Jan  8 16:00 EVNT.47898824._000928.pool.root.1
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:00 start_atlas.sh
[2026-01-08 21:58:03] drwxrwx--x. 2 boinc boinc        68 Jan  8 16:00 shared
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc    592398 Jan  8 16:00 input.tar.gz
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc         0 Jan  8 16:00 boinc_lockfile
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc      2519 Jan  8 16:02 pandaJob.out
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc    989835 Jan  8 16:09 agis_schedconf.cvmfs.json
[2026-01-08 21:58:03] drwx------. 5 boinc boinc      4096 Jan  8 16:09 pilot3
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc 218128847 Jan  8 21:56 HITS.47898826._023300.pool.root.1
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc       531 Jan  8 21:56 boinc_task_state.xml
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc        95 Jan  8 21:57 pilot_heartbeat.json
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc      1021 Jan  8 21:57 memory_monitor_summary.json
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc   1516240 Jan  8 21:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc    558096 Jan  8 21:57 log.47898826._023300.job.log.tgz.1
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc      7784 Jan  8 21:57 heartbeat.json
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:57 boinc_mmap_file
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc        28 Jan  8 21:57 wrapper_checkpoint.txt
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc       890 Jan  8 21:58 pilotlog.txt
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc   2780393 Jan  8 21:58 log.47898826._023300.job.log.1
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc       357 Jan  8 21:58 output.list
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:58 runtime_log
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc   3358720 Jan  8 21:58 result.tar.gz
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc      8817 Jan  8 21:58 runtime_log.err
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc       657 Jan  8 21:58 RBjMDmJ52x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQ9eKDm0dK02m.diag
[2026-01-08 21:58:03] -rw-r--r--. 1 boinc boinc     20668 Jan  8 21:58 stderr.txt
[2026-01-08 21:58:03] HITS file was successfully produced:
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc 218128847 Jan  8 21:56 shared/HITS.pool.root.1
[2026-01-08 21:58:03]  *** Contents of shared directory: ***
[2026-01-08 21:58:03] total 438040
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc 226450797 Jan  8 16:00 ATLAS.root_0
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:00 start_atlas.sh
[2026-01-08 21:58:03] -rw-r--r--. 2 boinc boinc    592398 Jan  8 16:00 input.tar.gz
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc 218128847 Jan  8 21:56 HITS.pool.root.1
[2026-01-08 21:58:03] -rw-------. 1 boinc boinc   3358720 Jan  8 21:58 result.tar.gz
21:58:04 (12958): run_atlas exited; CPU time 82704.730254
21:58:04 (12958): called boinc_finish(0)

</stderr_txt>
]]>

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