Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:35:28 (7666): wrapper (7.7.26015): starting
21:35:28 (7666): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:35:28] Arguments: --nthreads 8
[2026-01-08 21:35:28] Threads: 8
[2026-01-08 21:35:28] Checking for CVMFS
[2026-01-08 21:35:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:35:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:35:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:35:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:35:31] 2.11.2.0 21704 34463 129132 154919 0 60 19419408 25165825 899 130560 0 16770578 99.803 11893476 3061 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 21:35:31] CVMFS is ok
[2026-01-08 21:35:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:35:31] Checking for apptainer binary...
[2026-01-08 21:35:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:35:31] Running /usr/bin/apptainer --version
[2026-01-08 21:35:31] apptainer version 1.3.2-1.el7
[2026-01-08 21:35:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:35:37] cg-vwn497.simple-grid.lan
[2026-01-08 21:35:37] apptainer works
[2026-01-08 21:35:37] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:35:37] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:35:38] Starting ATLAS job with PandaID=6963074065
[2026-01-08 21:35:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:33:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:33:30] 2026-01-09 02:32:25,184 | INFO     | time since job start (21162s) is within the limit (174528.0s)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,853 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 03:33:30] 2026-01-09 02:32:25,854 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 03:33:30] 2026-01-09 02:32:25,856 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963074065/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,857 | INFO     | extracted standard info from prmon json
[2026-01-09 03:33:30] 2026-01-09 02:32:25,857 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:33:30] 2026-01-09 02:32:25,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:33:30] 2026-01-09 02:32:25,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:33:30] 2026-01-09 02:32:25,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:33:30] 2026-01-09 02:32:25,865 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:33:30] 2026-01-09 02:32:25,866 | INFO     | sum of square deviations: 11762304260.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,876 | INFO     | sum of deviations: 160681641835.99994
[2026-01-09 03:33:30] 2026-01-09 02:32:25,876 | INFO     | mean x: 1767915545.5
[2026-01-09 03:33:30] 2026-01-09 02:32:25,877 | INFO     | mean y: 2445905.9404761903
[2026-01-09 03:33:30] 2026-01-09 02:32:25,877 | INFO     | intersect: -24148567891.956932
[2026-01-09 03:33:30] 2026-01-09 02:32:25,877 | INFO     | chi2: 7.861077953540349
[2026-01-09 03:33:30] 2026-01-09 02:32:25,878 | INFO     | sum of square deviations: 11244973630.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,882 | INFO     | sum of deviations: 180234083100.00003
[2026-01-09 03:33:30] 2026-01-09 02:32:25,882 | INFO     | mean x: 1767915393.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,882 | INFO     | mean y: 2451590.2658610274
[2026-01-09 03:33:30] 2026-01-09 02:32:25,882 | INFO     | intersect: -28333640635.47742
[2026-01-09 03:33:30] 2026-01-09 02:32:25,883 | INFO     | chi2: 7.139059606034882
[2026-01-09 03:33:30] 2026-01-09 02:32:25,883 | INFO     | current chi2=7.139059606034882 (change=9.184724433120463 %)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,883 | INFO     | right removable region: 330
[2026-01-09 03:33:30] 2026-01-09 02:32:25,884 | INFO     | sum of square deviations: 11244973630.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,888 | INFO     | sum of deviations: 45029546629.000015
[2026-01-09 03:33:30] 2026-01-09 02:32:25,888 | INFO     | mean x: 1767915698.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,888 | INFO     | mean y: 2479978.8610271905
[2026-01-09 03:33:30] 2026-01-09 02:32:25,888 | INFO     | intersect: -7076989033.57383
[2026-01-09 03:33:30] 2026-01-09 02:32:25,889 | INFO     | chi2: 3.1676120333583175
[2026-01-09 03:33:30] 2026-01-09 02:32:25,889 | INFO     | current chi2=3.1676120333583175 (change=59.705118660835346 %)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,890 | INFO     | sum of square deviations: 10743038637.5
[2026-01-09 03:33:30] 2026-01-09 02:32:25,899 | INFO     | sum of deviations: -33184997929.500008
[2026-01-09 03:33:30] 2026-01-09 02:32:25,900 | INFO     | mean x: 1767915850.5
[2026-01-09 03:33:30] 2026-01-09 02:32:25,900 | INFO     | mean y: 2503681.5490797544
[2026-01-09 03:33:30] 2026-01-09 02:32:25,900 | INFO     | intersect: 5463554862.504841
[2026-01-09 03:33:30] 2026-01-09 02:32:25,900 | INFO     | chi2: 0.9180225566754641
[2026-01-09 03:33:30] 2026-01-09 02:32:25,900 | INFO     | current chi2=0.9180225566754641 (change=71.01846605557398 %)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,901 | INFO     | sum of square deviations: 10256266720.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,904 | INFO     | sum of deviations: -38618082702.99999
[2026-01-09 03:33:30] 2026-01-09 02:32:25,905 | INFO     | mean x: 1767916003.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,905 | INFO     | mean y: 2505361.246105919
[2026-01-09 03:33:30] 2026-01-09 02:32:25,905 | INFO     | intersect: 6659267346.840333
[2026-01-09 03:33:30] 2026-01-09 02:32:25,905 | INFO     | chi2: 0.8803303716154105
[2026-01-09 03:33:30] 2026-01-09 02:32:25,905 | INFO     | current chi2=0.8803303716154105 (change=4.105801626111718 %)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,906 | INFO     | left removable region: 30
[2026-01-09 03:33:30] 2026-01-09 02:32:25,906 | INFO     | sum of square deviations: 8372156975.0
[2026-01-09 03:33:30] 2026-01-09 02:32:25,909 | INFO     | sum of deviations: 7226269077.499999
[2026-01-09 03:33:30] 2026-01-09 02:32:25,909 | INFO     | mean x: 1767916277.5
[2026-01-09 03:33:30] 2026-01-09 02:32:25,909 | INFO     | mean y: 2503925.736666667
[2026-01-09 03:33:30] 2026-01-09 02:32:25,909 | INFO     | intersect: -1523439599.4332204
[2026-01-09 03:33:30] 2026-01-09 02:32:25,910 | INFO     | chi2: 0.0015978706784208912
[2026-01-09 03:33:30] 2026-01-09 02:32:25,910 | INFO     | current memory leak: 0.86 B/s (using 300 data points, chi2=0.00)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | ..............................
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | . Timing measurements:
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | . get job = 0 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | . initial setup = 12 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | . payload setup = 151 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,911 | INFO     | . stage-in = 0 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,912 | INFO     | . payload execution = 20669 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,912 | INFO     | . stage-out = 3 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,912 | INFO     | . log creation = 1 s
[2026-01-09 03:33:30] 2026-01-09 02:32:25,912 | INFO     | ..............................
[2026-01-09 03:33:30] 2026-01-09 02:32:26,346 | INFO     | 
[2026-01-09 03:33:30] 2026-01-09 02:32:26,346 | INFO     | job summary report
[2026-01-09 03:33:30] 2026-01-09 02:32:26,346 | INFO     | --------------------------------------------------
[2026-01-09 03:33:30] 2026-01-09 02:32:26,346 | INFO     | PanDA job id: 6963074065
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | task id: 47898826
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | errors: (none)
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | pilot state: finished 
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | transexitcode: 0
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | exeerrorcode: 0
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | exeerrordiag: 
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | exitcode: 0
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | exitmsg: OK
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | cpuconsumptiontime: 77840 s
[2026-01-09 03:33:30] 2026-01-09 02:32:26,347 | INFO     | nevents: 400
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | neventsw: 0
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | pid: 17880
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | pgrp: 17880
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | corecount: 8
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | event service: False
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | sizes: {0: 2283141, 1: 2283827, 2: 2284026, 12: 2284026, 23: 2284054, 34: 2284082, 45: 2284238, 55: 2284266, 66: 2284294, 77: 2284322, 88: 2284378, 98: 2284686, 10
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | --------------------------------------------------
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | 
[2026-01-09 03:33:30] 2026-01-09 02:32:26,348 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 03:33:30] 2026-01-09 02:32:26,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:33:30] 2026-01-09 02:32:26,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,840 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:33:30] 2026-01-09 02:32:26,840 | INFO     | job 6963074065 has completed (purged errors)
[2026-01-09 03:33:30] 2026-01-09 02:32:26,840 | INFO     | overall cleanup function is called
[2026-01-09 03:33:30] 2026-01-09 02:32:27,849 | INFO     | --- collectZombieJob: --- 10, [17880]
[2026-01-09 03:33:30] 2026-01-09 02:32:27,849 | INFO     | zombie collector waiting for pid 17880
[2026-01-09 03:33:30] 2026-01-09 02:32:27,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:33:30] 2026-01-09 02:32:27,849 | INFO     | collected zombie processes
[2026-01-09 03:33:30] 2026-01-09 02:32:27,850 | INFO     | will attempt to kill all subprocesses of pid=17880
[2026-01-09 03:33:30] 2026-01-09 02:32:27,942 | INFO     | process IDs to be killed: [17880] (in reverse order)
[2026-01-09 03:33:30] 2026-01-09 02:32:29,062 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:33:30] 2026-01-09 02:32:29,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:33:30] 2026-01-09 02:32:29,064 | INFO     | did not find any defunct processes belonging to 17880
[2026-01-09 03:33:30] 2026-01-09 02:32:29,066 | INFO     | did not find any defunct processes belonging to 17880
[2026-01-09 03:33:30] 2026-01-09 02:32:29,066 | INFO     | ready for new job
[2026-01-09 03:33:30] 2026-01-09 02:32:29,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:33:30] 2026-01-09 02:32:29,069 | INFO     | ***************************************
[2026-01-09 03:33:30] 2026-01-09 02:32:29,069 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:33:30] 2026-01-09 02:32:29,069 | INFO     | ***************************************
[2026-01-09 03:33:30] 2026-01-09 02:32:29,069 | INFO     | 
[2026-01-09 03:33:30] 2026-01-09 02:32:29,070 | INFO     | pilot is running in a VM
[2026-01-09 03:33:30] 2026-01-09 02:32:29,070 | INFO     | architecture information:
[2026-01-09 03:33:30] 2026-01-09 02:32:29,071 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:33:30] 2026-01-09 02:32:29,321 | INFO     | cat /etc/os-release:
[2026-01-09 03:33:30] NAME="CentOS Linux"
[2026-01-09 03:33:30] VERSION="7 (Core)"
[2026-01-09 03:33:30] ID="centos"
[2026-01-09 03:33:30] ID_LIKE="rhel fedora"
[2026-01-09 03:33:30] VERSION_ID="7"
[2026-01-09 03:33:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:33:30] ANSI_COLOR="0;31"
[2026-01-09 03:33:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:33:30] HOME_URL="https://www.centos.org/"
[2026-01-09 03:33:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:33:30] 
[2026-01-09 03:33:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:33:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:33:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:33:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:33:30] 
[2026-01-09 03:33:30] 2026-01-09 02:32:29,322 | INFO     | ***************************************
[2026-01-09 03:33:30] 2026-01-09 02:32:29,829 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 03:33:30] 2026-01-09 02:32:30,095 | INFO     | sufficient remaining disk space (497377345536 B)
[2026-01-09 03:33:30] 2026-01-09 02:32:30,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:33:30] 2026-01-09 02:32:30,095 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:33:30] 2026-01-09 02:32:30,095 | INFO     | update_server=False
[2026-01-09 03:33:30] 2026-01-09 02:32:30,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:33:30] 2026-01-09 02:32:30,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:33:30] 2026-01-09 02:32:30,458 | INFO     | aborting loop
[2026-01-09 03:33:30] 2026-01-09 02:32:30,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:33:30] 2026-01-09 02:32:30,903 | INFO     | all data control threads have been joined
[2026-01-09 03:33:30] 2026-01-09 02:32:30,982 | INFO     | all payload control threads have been joined
[2026-01-09 03:33:30] 2026-01-09 02:32:31,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:33:30] 2026-01-09 02:32:31,101 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,178 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,335 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,346 | INFO     | [job] validate thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,354 | INFO     | all job control threads have been joined
[2026-01-09 03:33:30] 2026-01-09 02:32:31,434 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,464 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,909 | INFO     | [data] control thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:31,987 | INFO     | [payload] control thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,046 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,129 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,181 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,263 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,360 | INFO     | [job] control thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:32,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:33:30] 2026-01-09 02:32:32,737 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:36,574 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:33:30] 2026-01-09 02:32:58,294 | INFO     | PID=11390 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 03:33:30] 2026-01-09 02:32:58,294 | INFO     | .. there are 2 such processes running
[2026-01-09 03:33:30] 2026-01-09 02:32:58,295 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:33:30] 2026-01-09 02:32:58,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:33:30] 2026-01-09 02:32:58,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:33:30] 2026-01-09 02:33:19,605 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:33:30] 2026-01-09 02:33:20,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223459198784)>', '<ExcThread(monitor, started 140222872405760)>']
[2026-01-09 03:33:30] 2026-01-09 02:33:20,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:33:30] 2026-01-09 02:33:20,427 | INFO     | [monitor] control thread has ended
[2026-01-09 03:33:30] 2026-01-09 02:33:25,409 | INFO     | all workflow threads have been joined
[2026-01-09 03:33:30] 2026-01-09 02:33:25,409 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:33:30] 2026-01-09 02:33:25,410 | INFO     | traces error code: 0
[2026-01-09 03:33:30] 2026-01-09 02:33:25,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:33:30] 2026-01-09 02:33:25,673 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:33:30] 2026-01-09 02:33:25,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:33:30] 2026-01-09 02:33:25,885 [wrapper] pilotpid: 11390
[2026-01-09 03:33:30] 2026-01-09 02:33:26,011 [wrapper] Pilot exit status: 0
[2026-01-09 03:33:30] 2026-01-09 02:33:26,185 [wrapper] pandaids: 6963074065
[2026-01-09 03:33:30] 2026-01-09 02:33:27,149 [wrapper] cleanup supervisor_pilot 17047 11391
[2026-01-09 03:33:30] 2026-01-09 02:33:27,243 [wrapper] Test setup, not cleaning
[2026-01-09 03:33:30] 2026-01-09 02:33:27,364 [wrapper] apfmon messages muted
[2026-01-09 03:33:30] 2026-01-09 02:33:27,495 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:33:30] 2026-01-09 02:33:27,624 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:33:30]  *** Error codes and diagnostics ***
[2026-01-09 03:33:30]     "exeErrorCode": 0,
[2026-01-09 03:33:30]     "exeErrorDiag": "",
[2026-01-09 03:33:30]     "pilotErrorCode": 0,
[2026-01-09 03:33:30]     "pilotErrorDiag": "",
[2026-01-09 03:33:30]  *** Listing of results directory ***
[2026-01-09 03:33:30] total 447084
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 03:33:30] -rwx------. 1 boinc boinc     36322 Jan  8 12:09 runpilot2-wrapper.sh
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:33:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:35 run_atlas
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:35 job.xml
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc      6390 Jan  8 21:35 init_data.xml
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc 222332798 Jan  8 21:35 EVNT.47898824._000907.pool.root.1
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:35 start_atlas.sh
[2026-01-09 03:33:30] drwxrwx--x. 2 boinc boinc        68 Jan  8 21:35 shared
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc    592392 Jan  8 21:35 input.tar.gz
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:35 boinc_lockfile
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc      2519 Jan  8 21:35 pandaJob.out
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc    989845 Jan  8 21:39 agis_schedconf.cvmfs.json
[2026-01-09 03:33:30] drwx------. 5 boinc boinc      4096 Jan  8 21:39 pilot3
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc 224837244 Jan  9 03:28 HITS.47898826._022762.pool.root.1
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc       531 Jan  9 03:28 boinc_task_state.xml
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc      1011 Jan  9 03:30 memory_monitor_summary.json
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc   1516240 Jan  9 03:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc    545135 Jan  9 03:30 log.47898826._022762.job.log.tgz.1
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc      7779 Jan  9 03:32 heartbeat.json
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc        95 Jan  9 03:32 pilot_heartbeat.json
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc        28 Jan  9 03:33 wrapper_checkpoint.txt
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc      8192 Jan  9 03:33 boinc_mmap_file
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc      4885 Jan  9 03:33 pilotlog.txt
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc   2830149 Jan  9 03:33 log.47898826._022762.job.log.1
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc       357 Jan  9 03:33 output.list
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc       620 Jan  9 03:33 runtime_log
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc   3389440 Jan  9 03:33 result.tar.gz
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc      8833 Jan  9 03:33 runtime_log.err
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc       657 Jan  9 03:33 gHOLDmy42x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcJkKDmYS0p0m.diag
[2026-01-09 03:33:30] -rw-r--r--. 1 boinc boinc     20733 Jan  9 03:33 stderr.txt
[2026-01-09 03:33:30] HITS file was successfully produced:
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc 224837244 Jan  9 03:28 shared/HITS.pool.root.1
[2026-01-09 03:33:30]  *** Contents of shared directory: ***
[2026-01-09 03:33:30] total 440600
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc 222332798 Jan  8 21:35 ATLAS.root_0
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:35 start_atlas.sh
[2026-01-09 03:33:30] -rw-r--r--. 2 boinc boinc    592392 Jan  8 21:35 input.tar.gz
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc 224837244 Jan  9 03:28 HITS.pool.root.1
[2026-01-09 03:33:30] -rw-------. 1 boinc boinc   3389440 Jan  9 03:33 result.tar.gz
03:33:32 (7666): run_atlas exited; CPU time 78041.414211
03:33:32 (7666): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN