Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:08 (3113018): wrapper (7.7.26015): starting
07:11:08 (3113018): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 07:11:08] Arguments: --nthreads 12
[2026-01-08 07:11:08] Threads: 12
[2026-01-08 07:11:08] Checking for CVMFS
[2026-01-08 07:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 07:11:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 07:11:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 07:11:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 07:11:09] 2.11.5.0 916571 55287 305896 154911 3 329 37817010 45568000 19520 130560 0 418140975 99.794 260227734 22423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 07:11:09] CVMFS is ok
[2026-01-08 07:11:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 07:11:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 07:11:09] Further information can be found at the LHC@home message board.
[2026-01-08 07:11:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 07:11:09] Checking for apptainer binary...
[2026-01-08 07:11:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 07:11:09] Running /usr/bin/apptainer --version
[2026-01-08 07:11:09] apptainer version 1.4.1-1.el9
[2026-01-08 07:11:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 07:11:09] wns0045.triumf.lcg
[2026-01-08 07:11:09] apptainer works
[2026-01-08 07:11:09] Set ATHENA_PROC_NUMBER=12
[2026-01-08 07:11:09] Set ATHENA_CORE_NUMBER=12
[2026-01-08 07:11:09] Starting ATLAS job with PandaID=6963078053
[2026-01-08 07:11:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:15:39]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | found no stored workdir sizes
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | WARNING  | wrong length of table data, x=[1767885135.0], y=[1233.0] (must be same and length>=4)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . Timing measurements:
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . get job = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . initial setup = 3 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload setup = 10 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-in = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload execution = 26 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-out = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . log creation = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 07:15:39] 2026-01-08 15:14:42,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078053/pilotlog.txt
[2026-01-08 07:15:39] 2026-01-08 15:14:42,632 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 07:15:39] - Log from pilotlog.txt -
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | found no stored workdir sizes
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | WARNING  | wrong length of table data, x=[1767885135.0], y=[1233.0] (must be same and length>=4)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . Timing measurements:
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . get job = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . initial setup = 3 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload setup = 10 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-in = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload execution = 26 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-out = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . log creation = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 07:15:39] 2026-01-08 15:14:42,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078053/pilotlog.txt
[2026-01-08 07:15:39] 2026-01-08 15:14:42,632 | WARNING  | 
[2026-01-08 07:15:39] [begin log extracts]
[2026-01-08 07:15:39] - Log from pilotlog.txt -
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | WARNING  | found no stored workdir sizes
[2026-01-08 07:15:39] 2026-01-08 15:14:42,616 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | WARNING  | wrong length of table data, x=[1767885135.0], y=[1233.0] (must be same and length>=4)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . Timing measurements:
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . get job = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . initial setup = 3 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload setup = 10 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-in = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . payload execution = 26 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . stage-out = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | . log creation = 0 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | ..............................
[2026-01-08 07:15:39] 2026-01-08 15:14:42,617 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 07:15:39] 2026-01-08 15:14:42,618 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078053/pilotlog.txt
[2026-01-08 07:15:39] [end log extracts]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,632 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,633 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | 
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | job summary report
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | --------------------------------------------------
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | PanDA job id: 6963078053
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | task id: 47898826
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 07:12:26,376 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | pilot state: failed 
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | transexitcode: 65
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | exeerrorcode: 65
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | exitcode: 65
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | cpuconsumptiontime: 16 s
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | nevents: 0
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | neventsw: 0
[2026-01-08 07:15:39] 2026-01-08 15:14:42,911 | INFO     | pid: 3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | pgrp: 3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | corecount: 12
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | event service: False
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | sizes: {0: 2283739, 1: 2283795, 2: 2284022, 12: 2284284, 13: 2284312, 40: 2307716, 41: 2312008, 44: 2312036, 169: 2312202}
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | --------------------------------------------------
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | 
[2026-01-08 07:15:39] 2026-01-08 15:14:42,912 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 07:15:39] 2026-01-08 15:14:42,952 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,952 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,952 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,952 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:15:39] 2026-01-08 15:14:42,953 | INFO     | job 6963078053 has completed (purged errors)
[2026-01-08 07:15:39] 2026-01-08 15:14:42,954 | INFO     | overall cleanup function is called
[2026-01-08 07:15:39] 2026-01-08 15:14:43,960 | INFO     | --- collectZombieJob: --- 10, [3123408]
[2026-01-08 07:15:39] 2026-01-08 15:14:43,960 | INFO     | zombie collector waiting for pid 3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:43,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:15:39] 2026-01-08 15:14:43,960 | INFO     | collected zombie processes
[2026-01-08 07:15:39] 2026-01-08 15:14:43,960 | INFO     | will attempt to kill all subprocesses of pid=3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:44,185 | INFO     | process IDs to be killed: [3123408] (in reverse order)
[2026-01-08 07:15:39] 2026-01-08 15:14:44,302 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:15:39] 2026-01-08 15:14:44,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:15:39] 2026-01-08 15:14:44,311 | INFO     | did not find any defunct processes belonging to 3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:44,319 | INFO     | did not find any defunct processes belonging to 3123408
[2026-01-08 07:15:39] 2026-01-08 15:14:44,320 | INFO     | ready for new job
[2026-01-08 07:15:39] 2026-01-08 15:14:44,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:15:39] 2026-01-08 15:14:44,321 | INFO     | ***************************************
[2026-01-08 07:15:39] 2026-01-08 15:14:44,321 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:15:39] 2026-01-08 15:14:44,322 | INFO     | ***************************************
[2026-01-08 07:15:39] 2026-01-08 15:14:44,322 | INFO     | 
[2026-01-08 07:15:39] 2026-01-08 15:14:44,323 | INFO     | architecture information:
[2026-01-08 07:15:39] 2026-01-08 15:14:44,324 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:15:39] 2026-01-08 15:14:44,342 | INFO     | cat /etc/os-release:
[2026-01-08 07:15:39] NAME="CentOS Linux"
[2026-01-08 07:15:39] VERSION="7 (Core)"
[2026-01-08 07:15:39] ID="centos"
[2026-01-08 07:15:39] ID_LIKE="rhel fedora"
[2026-01-08 07:15:39] VERSION_ID="7"
[2026-01-08 07:15:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:15:39] ANSI_COLOR="0;31"
[2026-01-08 07:15:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:15:39] HOME_URL="https://www.centos.org/"
[2026-01-08 07:15:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:15:39] 
[2026-01-08 07:15:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:15:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:15:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:15:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:15:39] 
[2026-01-08 07:15:39] 2026-01-08 15:14:44,342 | INFO     | ***************************************
[2026-01-08 07:15:39] 2026-01-08 15:14:44,845 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 07:15:39] 2026-01-08 15:14:44,858 | INFO     | sufficient remaining disk space (1253233917952 B)
[2026-01-08 07:15:39] 2026-01-08 15:14:44,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:15:39] 2026-01-08 15:14:44,858 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:15:39] 2026-01-08 15:14:44,858 | INFO     | update_server=False
[2026-01-08 07:15:39] 2026-01-08 15:14:44,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:15:39] 2026-01-08 15:14:44,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:15:39] 2026-01-08 15:14:44,933 | INFO     | aborting loop
[2026-01-08 07:15:39] 2026-01-08 15:14:45,536 | INFO     | all data control threads have been joined
[2026-01-08 07:15:39] 2026-01-08 15:14:45,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:15:39] 2026-01-08 15:14:45,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:15:39] 2026-01-08 15:14:45,869 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:45,880 | INFO     | all payload control threads have been joined
[2026-01-08 07:15:39] 2026-01-08 15:14:45,938 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,035 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,154 | INFO     | all job control threads have been joined
[2026-01-08 07:15:39] 2026-01-08 15:14:46,354 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,542 | INFO     | [data] control thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,677 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,883 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:46,886 | INFO     | [payload] control thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,013 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,160 | INFO     | [job] control thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,260 | INFO     | [job] validate thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,274 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,279 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:47,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:15:39] 2026-01-08 15:14:47,840 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:48,716 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:14:49,691 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:15:39] 2026-01-08 15:15:14,364 | INFO     | PID=3116731 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:15:39] 2026-01-08 15:15:14,364 | INFO     | .. there are 39 such processes running
[2026-01-08 07:15:39] 2026-01-08 15:15:14,364 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:15:39] 2026-01-08 15:15:14,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:15:39] 2026-01-08 15:15:14,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:15:39] 2026-01-08 15:15:32,096 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:15:39] 2026-01-08 15:15:34,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338386908992)>', '<ExcThread(monitor, started 140337108477696)>']
[2026-01-08 07:15:39] 2026-01-08 15:15:34,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:15:39] 2026-01-08 15:15:34,480 | INFO     | [monitor] control thread has ended
[2026-01-08 07:15:39] 2026-01-08 15:15:39,164 | INFO     | all workflow threads have been joined
[2026-01-08 07:15:39] 2026-01-08 15:15:39,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:15:39] 2026-01-08 15:15:39,165 | INFO     | traces error code: 0
[2026-01-08 07:15:39] 2026-01-08 15:15:39,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:15:39] 2026-01-08 15:15:39,273 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:15:39] 2026-01-08 15:15:39,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:15:39] 2026-01-08 15:15:39,278 [wrapper] pilotpid: 3116731
[2026-01-08 07:15:39] 2026-01-08 15:15:39,283 [wrapper] Pilot exit status: 0
[2026-01-08 07:15:39] 2026-01-08 15:15:39,290 [wrapper] pandaids: 6963078053
[2026-01-08 07:15:39] 2026-01-08 15:15:39,338 [wrapper] cleanup supervisor_pilot 3116737 3116732
[2026-01-08 07:15:39] 2026-01-08 15:15:39,340 [wrapper] Test setup, not cleaning
[2026-01-08 07:15:39] 2026-01-08 15:15:39,342 [wrapper] apfmon messages muted
[2026-01-08 07:15:39] 2026-01-08 15:15:39,344 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:15:39] 2026-01-08 15:15:39,345 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:15:39]  *** Error codes and diagnostics ***
[2026-01-08 07:15:39]     "exeErrorCode": 65,
[2026-01-08 07:15:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 07:15:39]     "pilotErrorCode": 1305,
[2026-01-08 07:15:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 07:15:39]  *** Listing of results directory ***
[2026-01-08 07:15:39] total 225188
[2026-01-08 07:15:39] -rwx------. 1 boinc boinc     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc      5112 Jan  8 03:09 queuedata.json
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc    579449 Jan  8 03:09 pilot3.tar.gz
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc       100 Jan  8 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:15:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 07:11 run_atlas
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc       105 Jan  8 07:11 job.xml
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc      6595 Jan  8 07:11 init_data.xml
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc 226468320 Jan  8 07:11 EVNT.47898824._000998.pool.root.1
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc     15847 Jan  8 07:11 start_atlas.sh
[2026-01-08 07:15:39] drwxrwx--x. 2 boinc boinc      4096 Jan  8 07:11 shared
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc    592402 Jan  8 07:11 input.tar.gz
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc         0 Jan  8 07:11 boinc_lockfile
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc      2519 Jan  8 07:11 pandaJob.out
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc    989835 Jan  8 07:11 agis_schedconf.cvmfs.json
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc   1516240 Jan  8 07:11 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:15:39] drwx------. 5 boinc boinc      4096 Jan  8 07:11 pilot3
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc       521 Jan  8 07:12 boinc_task_state.xml
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc       981 Jan  8 07:12 memory_monitor_summary.json
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc     20668 Jan  8 07:12 log.47898826._024430.job.log.tgz.1
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc        95 Jan  8 07:14 pilot_heartbeat.json
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc      8427 Jan  8 07:14 heartbeat.json
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc      8192 Jan  8 07:15 boinc_mmap_file
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc        22 Jan  8 07:15 wrapper_checkpoint.txt
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc      4823 Jan  8 07:15 pilotlog.txt
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc     85078 Jan  8 07:15 log.47898826._024430.job.log.1
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc       188 Jan  8 07:15 output.list
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc       620 Jan  8 07:15 runtime_log
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc    122880 Jan  8 07:15 result.tar.gz
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc      8636 Jan  8 07:15 runtime_log.err
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc       644 Jan  8 07:15 ettMDmy22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml4eKDmoxSjUo.diag
[2026-01-08 07:15:39] -rw-r--r--. 1 boinc boinc     21665 Jan  8 07:15 stderr.txt
[2026-01-08 07:15:39] No HITS result produced
[2026-01-08 07:15:39]  *** Contents of shared directory: ***
[2026-01-08 07:15:39] total 221884
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc 226468320 Jan  8 07:11 ATLAS.root_0
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc     15847 Jan  8 07:11 start_atlas.sh
[2026-01-08 07:15:39] -rw-r--r--. 2 boinc boinc    592402 Jan  8 07:11 input.tar.gz
[2026-01-08 07:15:39] -rw-------. 1 boinc boinc    122880 Jan  8 07:15 result.tar.gz
07:15:40 (3113018): run_atlas exited; CPU time 23.446741
07:15:40 (3113018): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN