Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:49:21 (1801016): wrapper (7.7.26015): starting
20:49:21 (1801016): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 20:49:21] Arguments: --nthreads 4
[2026-01-08 20:49:21] Threads: 4
[2026-01-08 20:49:21] Checking for CVMFS
[2026-01-08 20:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:49:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:49:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:49:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:49:22] 2.9.2.0 1472446 1175 81908 154918 3 57 20942253 36864001 0 130560 0 855976 99.989 46862 14653 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 20:49:22] CVMFS is ok
[2026-01-08 20:49:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:49:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:49:22] Further information can be found at the LHC@home message board.
[2026-01-08 20:49:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:49:22] Checking for apptainer binary...
[2026-01-08 20:49:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:49:22] Running /usr/bin/apptainer --version
[2026-01-08 20:49:22] apptainer version 1.4.1-1.1
[2026-01-08 20:49:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:49:22] thA334
[2026-01-08 20:49:22] apptainer works
[2026-01-08 20:49:22] Set ATHENA_PROC_NUMBER=4
[2026-01-08 20:49:22] Set ATHENA_CORE_NUMBER=4
[2026-01-08 20:49:22] Starting ATLAS job with PandaID=6963076643
[2026-01-08 20:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:25:43]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:25:43] 2026-01-08 21:25:12,682 | INFO     | did not find any defunct processes belonging to 1811385
[2026-01-08 22:25:43] 2026-01-08 21:25:12,682 | INFO     | ready for new job
[2026-01-08 22:25:43] 2026-01-08 21:25:12,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | ***************************************
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | ***************************************
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | 
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | architecture information:
[2026-01-08 22:25:43] 2026-01-08 21:25:12,683 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:25:43] 2026-01-08 21:25:12,696 | INFO     | cat /etc/os-release:
[2026-01-08 22:25:43] NAME="CentOS Linux"
[2026-01-08 22:25:43] VERSION="7 (Core)"
[2026-01-08 22:25:43] ID="centos"
[2026-01-08 22:25:43] ID_LIKE="rhel fedora"
[2026-01-08 22:25:43] VERSION_ID="7"
[2026-01-08 22:25:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:25:43] ANSI_COLOR="0;31"
[2026-01-08 22:25:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:25:43] HOME_URL="https://www.centos.org/"
[2026-01-08 22:25:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:25:43] 
[2026-01-08 22:25:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:25:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:25:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:25:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:25:43] 
[2026-01-08 22:25:43] 2026-01-08 21:25:12,696 | INFO     | ***************************************
[2026-01-08 22:25:43] 2026-01-08 21:25:13,200 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-08 22:25:43] 2026-01-08 21:25:13,216 | INFO     | sufficient remaining disk space (238926430208 B)
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | INFO     | update_server=False
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:25:43] 2026-01-08 21:25:13,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:25:43] 2026-01-08 21:25:13,272 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 22:25:43] 2026-01-08 21:25:13,273 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 22:25:43] 2026-01-08 21:25:13,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:25:43] 2026-01-08 21:25:13,273 | INFO     | will abort loop
[2026-01-08 22:25:43] 2026-01-08 21:25:13,552 | INFO     | all payload control threads have been joined
[2026-01-08 22:25:43] 2026-01-08 21:25:13,552 | INFO     | all data control threads have been joined
[2026-01-08 22:25:43] 2026-01-08 21:25:14,223 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,223 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,231 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,279 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,313 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,357 | INFO     | all job control threads have been joined
[2026-01-08 22:25:43] 2026-01-08 21:25:14,558 | INFO     | [payload] control thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,558 | INFO     | [data] control thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,600 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,623 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:14,879 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:15,223 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:15,363 | INFO     | [job] control thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:15,576 | INFO     | [job] validate thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:15,600 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:15,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:25:43] 2026-01-08 21:25:15,665 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:19,636 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:25:43] 2026-01-08 21:25:36,187 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:25:43] 2026-01-08 21:25:37,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742746584896)>', '<ExcThread(monitor, started 139742079325952)>']
[2026-01-08 22:25:43] 2026-01-08 21:25:42,514 | INFO     | all workflow threads have been joined
[2026-01-08 22:25:43] 2026-01-08 21:25:42,515 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:25:43] 2026-01-08 21:25:42,516 | INFO     | traces error code: 0
[2026-01-08 22:25:43] 2026-01-08 21:25:42,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | INFO     | PID=1804808 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:25:43] 2026-01-08 21:25:43,540 | INFO     | [monitor] control thread has ended
[2026-01-08 22:25:43] 2026-01-08 21:25:43,604 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:25:43] 2026-01-08 21:25:43,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:25:43] 2026-01-08 21:25:43,612 [wrapper] pilotpid: 1804808
[2026-01-08 22:25:43] 2026-01-08 21:25:43,615 [wrapper] Pilot exit status: 0
[2026-01-08 22:25:43] 2026-01-08 21:25:43,626 [wrapper] pandaids: 6963076643
[2026-01-08 22:25:43] 2026-01-08 21:25:43,646 [wrapper] cleanup supervisor_pilot 1823706 1804809
[2026-01-08 22:25:43] 2026-01-08 21:25:43,650 [wrapper] Test setup, not cleaning
[2026-01-08 22:25:43] 2026-01-08 21:25:43,653 [wrapper] apfmon messages muted
[2026-01-08 22:25:43] 2026-01-08 21:25:43,657 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:25:43] 2026-01-08 21:25:43,660 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:25:43]  *** Error codes and diagnostics ***
[2026-01-08 22:25:43]     "exeErrorCode": 0,
[2026-01-08 22:25:43]     "exeErrorDiag": "",
[2026-01-08 22:25:43]     "pilotErrorCode": 0,
[2026-01-08 22:25:43]     "pilotErrorDiag": "",
[2026-01-08 22:25:43]  *** Listing of results directory ***
[2026-01-08 22:25:43] total 439916
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:06 pilot3.tar.gz
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:07 queuedata.json
[2026-01-08 22:25:43] -rwx------ 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc       100 Jan  8 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:25:43] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 20:49 run_atlas
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc       105 Jan  8 20:49 job.xml
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc 227069618 Jan  8 20:49 EVNT.47898824._000953.pool.root.1
[2026-01-08 22:25:43] drwxrwx--x 2 boinc boinc      4096 Jan  8 20:49 shared
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc    592397 Jan  8 20:49 input.tar.gz
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc     15847 Jan  8 20:49 start_atlas.sh
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc         0 Jan  8 20:49 boinc_setup_complete
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      6369 Jan  8 20:49 init_data.xml
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc         0 Jan  8 20:49 boinc_lockfile
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      2519 Jan  8 20:49 pandaJob.out
[2026-01-08 22:25:43] -rw------- 1 boinc boinc    989845 Jan  8 20:49 agis_schedconf.cvmfs.json
[2026-01-08 22:25:43] -rw------- 1 boinc boinc   1516240 Jan  8 20:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:25:43] drwx------ 5 boinc boinc      4096 Jan  8 20:49 pilot3
[2026-01-08 22:25:43] -rw------- 1 boinc boinc 217272122 Jan  8 22:24 HITS.47898826._023939.pool.root.1
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc       530 Jan  8 22:24 boinc_task_state.xml
[2026-01-08 22:25:43] -rw------- 1 boinc boinc        95 Jan  8 22:24 pilot_heartbeat.json
[2026-01-08 22:25:43] -rw------- 1 boinc boinc      1019 Jan  8 22:25 memory_monitor_summary.json
[2026-01-08 22:25:43] -rw------- 1 boinc boinc    281464 Jan  8 22:25 log.47898826._023939.job.log.tgz.1
[2026-01-08 22:25:43] -rw------- 1 boinc boinc      7757 Jan  8 22:25 heartbeat.json
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc        27 Jan  8 22:25 wrapper_checkpoint.txt
[2026-01-08 22:25:43] -rw------- 1 boinc boinc       747 Jan  8 22:25 pilotlog.txt
[2026-01-08 22:25:43] -rw------- 1 boinc boinc    836037 Jan  8 22:25 log.47898826._023939.job.log.1
[2026-01-08 22:25:43] -rw------- 1 boinc boinc       357 Jan  8 22:25 output.list
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc       620 Jan  8 22:25 runtime_log
[2026-01-08 22:25:43] -rw------- 1 boinc boinc   1136640 Jan  8 22:25 result.tar.gz
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      8897 Jan  8 22:25 runtime_log.err
[2026-01-08 22:25:43] -rw------- 1 boinc boinc       659 Jan  8 22:25 NgpLDmP22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJEkKDmEpddwm.diag
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      9870 Jan  8 22:25 stderr.txt
[2026-01-08 22:25:43] -rw-r--r-- 1 boinc boinc      8192 Jan  8 22:25 boinc_mmap_file
[2026-01-08 22:25:43] HITS file was successfully produced:
[2026-01-08 22:25:43] -rw------- 1 boinc boinc 217272122 Jan  8 22:24 shared/HITS.pool.root.1
[2026-01-08 22:25:43]  *** Contents of shared directory: ***
[2026-01-08 22:25:43] total 435644
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc 227069618 Jan  8 20:49 ATLAS.root_0
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc    592397 Jan  8 20:49 input.tar.gz
[2026-01-08 22:25:43] -rw-r--r-- 2 boinc boinc     15847 Jan  8 20:49 start_atlas.sh
[2026-01-08 22:25:43] -rw------- 1 boinc boinc 217272122 Jan  8 22:24 HITS.pool.root.1
[2026-01-08 22:25:43] -rw------- 1 boinc boinc   1136640 Jan  8 22:25 result.tar.gz
22:26:05 (1801016): run_atlas exited; CPU time 21936.309272
22:26:05 (1801016): called boinc_finish(0)

</stderr_txt>
]]>

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