Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:35:06 (3160179): wrapper (7.7.26015): starting
07:35:06 (3160179): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 07:35:06] Arguments: --nthreads 4
[2026-01-11 07:35:06] Threads: 4
[2026-01-11 07:35:06] Checking for CVMFS
[2026-01-11 07:35:06] No cvmfs_config command found, will try listing directly
[2026-01-11 07:35:06] CVMFS is ok
[2026-01-11 07:35:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:35:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:35:06] Further information can be found at the LHC@home message board.
[2026-01-11 07:35:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:35:06] Checking for apptainer binary...
[2026-01-11 07:35:06] which: no apptainer in ((null))
[2026-01-11 07:35:06] apptainer is not installed, using version from CVMFS
[2026-01-11 07:35:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:35:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-11 07:35:06] apptainer works
[2026-01-11 07:35:06] Set ATHENA_PROC_NUMBER=4
[2026-01-11 07:35:06] Set ATHENA_CORE_NUMBER=4
[2026-01-11 07:35:06] Starting ATLAS job with PandaID=6963074845
[2026-01-11 07:35:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 11:31:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 11:31:52] 2026-01-11 10:28:51,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:31:52] 2026-01-11 10:28:52,812 | INFO     | time since job start (14011s) is within the limit (174528.0s)
[2026-01-11 11:31:52] 2026-01-11 10:28:53,517 | INFO     | monitor loop #954: job 0:6963074845 is in state 'finished'
[2026-01-11 11:31:52] 2026-01-11 10:28:53,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:31:52] 2026-01-11 10:28:54,818 | INFO     | time since job start (14013s) is within the limit (174528.0s)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,020 | INFO     | monitor loop #955: job 0:6963074845 is in state 'finished'
[2026-01-11 11:31:52] 2026-01-11 10:28:56,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,377 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 11:31:52] 2026-01-11 10:28:56,424 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2692.188726562499
[2026-01-11 11:31:52] 2026-01-11 10:28:56,459 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6963074845/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,460 | INFO     | extracted standard info from prmon json
[2026-01-11 11:31:52] 2026-01-11 10:28:56,460 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 11:31:52] 2026-01-11 10:28:56,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 11:31:52] 2026-01-11 10:28:56,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 11:31:52] 2026-01-11 10:28:56,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 11:31:52] 2026-01-11 10:28:56,465 | INFO     | fitting pss+swap vs Time
[2026-01-11 11:31:52] 2026-01-11 10:28:56,465 | INFO     | sum of square deviations: 3723716330.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,467 | INFO     | sum of deviations: 10363500754.999992
[2026-01-11 11:31:52] 2026-01-11 10:28:56,467 | INFO     | mean x: 1768120310.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,467 | INFO     | mean y: 2338961.1048034932
[2026-01-11 11:31:52] 2026-01-11 10:28:56,467 | INFO     | intersect: -4918528941.74531
[2026-01-11 11:31:52] 2026-01-11 10:28:56,467 | INFO     | chi2: 1.2862151834711737
[2026-01-11 11:31:52] 2026-01-11 10:28:56,468 | INFO     | sum of square deviations: 3485088600.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,469 | INFO     | sum of deviations: 10147181213.000006
[2026-01-11 11:31:52] 2026-01-11 10:28:56,469 | INFO     | mean x: 1768120157.5
[2026-01-11 11:31:52] 2026-01-11 10:28:56,469 | INFO     | mean y: 2338822.839285714
[2026-01-11 11:31:52] 2026-01-11 10:28:56,470 | INFO     | intersect: -5145718430.141488
[2026-01-11 11:31:52] 2026-01-11 10:28:56,470 | INFO     | chi2: 1.2866860559136524
[2026-01-11 11:31:52] 2026-01-11 10:28:56,470 | INFO     | current chi2=1.2866860559136524 (change=-0.036609149738685925 %)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,470 | INFO     | right removable region: 223
[2026-01-11 11:31:52] 2026-01-11 10:28:56,470 | INFO     | sum of square deviations: 3485088600.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,472 | INFO     | sum of deviations: -15194433483.5
[2026-01-11 11:31:52] 2026-01-11 10:28:56,472 | INFO     | mean x: 1768120462.5
[2026-01-11 11:31:52] 2026-01-11 10:28:56,472 | INFO     | mean y: 2355075.620535714
[2026-01-11 11:31:52] 2026-01-11 10:28:56,472 | INFO     | intersect: 7711079828.922792
[2026-01-11 11:31:52] 2026-01-11 10:28:56,472 | INFO     | chi2: 0.05385563284167213
[2026-01-11 11:31:52] 2026-01-11 10:28:56,473 | INFO     | current chi2=0.05385563284167213 (change=95.81285981274694 %)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,473 | INFO     | sum of square deviations: 3256879670.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,474 | INFO     | sum of deviations: -11642330923.999998
[2026-01-11 11:31:52] 2026-01-11 10:28:56,474 | INFO     | mean x: 1768120615.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | mean y: 2352688.913242009
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | intersect: 6322833455.516571
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | chi2: 0.04581392020552141
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | current chi2=0.04581392020552141 (change=14.931980578136 %)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | left removable region: 20
[2026-01-11 11:31:52] 2026-01-11 10:28:56,475 | INFO     | sum of square deviations: 2593916542.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | sum of deviations: -2914677478.0000005
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | mean x: 1768120737.0
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | mean y: 2346541.147783251
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | intersect: 1989111191.0794778
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | chi2: 0.020372001778547654
[2026-01-11 11:31:52] 2026-01-11 10:28:56,477 | INFO     | current memory leak: -1.12 B/s (using 203 data points, chi2=0.02)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | could have reported an average CPU frequency of 2688 MHz (11 samples)
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | ..............................
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . Timing measurements:
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . get job = 0 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . initial setup = 1 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . payload setup = 9 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . stage-in = 0 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,478 | INFO     | . payload execution = 13972 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,479 | INFO     | . stage-out = 1 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,479 | INFO     | . log creation = 0 s
[2026-01-11 11:31:52] 2026-01-11 10:28:56,479 | INFO     | ..............................
[2026-01-11 11:31:52] 2026-01-11 10:28:56,981 | INFO     | PID=3164634 has CPU usage=17.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 11:31:52] 2026-01-11 10:28:56,982 | INFO     | .. there are 7 such processes running
[2026-01-11 11:31:52] 2026-01-11 10:28:57,037 | INFO     | 
[2026-01-11 11:31:52] 2026-01-11 10:28:57,037 | INFO     | job summary report
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | --------------------------------------------------
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | PanDA job id: 6963074845
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | task id: 47898826
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | errors: (none)
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | pilot state: finished 
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | transexitcode: 0
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | exeerrorcode: 0
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | exeerrordiag: 
[2026-01-11 11:31:52] 2026-01-11 10:28:57,038 | INFO     | exitcode: 0
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | exitmsg: OK
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | cpuconsumptiontime: 53177 s
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | nevents: 400
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | neventsw: 0
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | pid: 3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | pgrp: 3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | corecount: 4
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | event service: False
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | sizes: {0: 2283753, 1: 2284008, 8: 2284270, 12: 2284298, 13985: 2315435, 13986: 2324455, 13989: 2324639, 13997: 2324833}
[2026-01-11 11:31:52] 2026-01-11 10:28:57,039 | INFO     | --------------------------------------------------
[2026-01-11 11:31:52] 2026-01-11 10:28:57,040 | INFO     | 
[2026-01-11 11:31:52] 2026-01-11 10:28:57,040 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-11 11:31:52] 2026-01-11 10:28:57,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,068 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 11:31:52] 2026-01-11 10:28:57,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 11:31:52] 2026-01-11 10:28:57,070 | INFO     | job 6963074845 has completed (purged errors)
[2026-01-11 11:31:52] 2026-01-11 10:28:57,070 | INFO     | overall cleanup function is called
[2026-01-11 11:31:52] 2026-01-11 10:28:58,079 | INFO     | --- collectZombieJob: --- 10, [3172437]
[2026-01-11 11:31:52] 2026-01-11 10:28:58,079 | INFO     | zombie collector waiting for pid 3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:58,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 11:31:52] 2026-01-11 10:28:58,079 | INFO     | collected zombie processes
[2026-01-11 11:31:52] 2026-01-11 10:28:58,079 | INFO     | will attempt to kill all subprocesses of pid=3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:58,880 | INFO     | process IDs to be killed: [3172437] (in reverse order)
[2026-01-11 11:31:52] 2026-01-11 10:28:59,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 11:31:52] 2026-01-11 10:28:59,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 11:31:52] 2026-01-11 10:28:59,180 | INFO     | did not find any defunct processes belonging to 3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:59,215 | INFO     | did not find any defunct processes belonging to 3172437
[2026-01-11 11:31:52] 2026-01-11 10:28:59,215 | INFO     | ready for new job
[2026-01-11 11:31:52] 2026-01-11 10:28:59,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 11:31:52] 2026-01-11 10:28:59,218 | INFO     | ***************************************
[2026-01-11 11:31:52] 2026-01-11 10:28:59,218 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 11:31:52] 2026-01-11 10:28:59,219 | INFO     | ***************************************
[2026-01-11 11:31:52] 2026-01-11 10:28:59,219 | INFO     | 
[2026-01-11 11:31:52] 2026-01-11 10:28:59,227 | INFO     | architecture information:
[2026-01-11 11:31:52] 2026-01-11 10:28:59,227 | INFO     | executing command: cat /etc/os-release
[2026-01-11 11:31:52] 2026-01-11 10:28:59,246 | INFO     | cat /etc/os-release:
[2026-01-11 11:31:52] NAME="CentOS Linux"
[2026-01-11 11:31:52] VERSION="7 (Core)"
[2026-01-11 11:31:52] ID="centos"
[2026-01-11 11:31:52] ID_LIKE="rhel fedora"
[2026-01-11 11:31:52] VERSION_ID="7"
[2026-01-11 11:31:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 11:31:52] ANSI_COLOR="0;31"
[2026-01-11 11:31:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 11:31:52] HOME_URL="https://www.centos.org/"
[2026-01-11 11:31:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 11:31:52] 
[2026-01-11 11:31:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 11:31:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 11:31:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 11:31:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 11:31:52] 
[2026-01-11 11:31:52] 2026-01-11 10:28:59,246 | INFO     | ***************************************
[2026-01-11 11:31:52] 2026-01-11 10:28:59,749 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-11 11:31:52] 2026-01-11 10:28:59,769 | INFO     | sufficient remaining disk space (3341744603136 B)
[2026-01-11 11:31:52] 2026-01-11 10:28:59,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | INFO     | update_server=False
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 11:31:52] 2026-01-11 10:28:59,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:31:52] 2026-01-11 10:28:59,771 | INFO     | aborting loop
[2026-01-11 11:31:52] 2026-01-11 10:29:00,349 | INFO     | all data control threads have been joined
[2026-01-11 11:31:52] 2026-01-11 10:29:00,502 | INFO     | all payload control threads have been joined
[2026-01-11 11:31:52] 2026-01-11 10:29:00,607 | INFO     | all job control threads have been joined
[2026-01-11 11:31:52] 2026-01-11 10:29:00,772 | INFO     | [job] retrieve thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:00,773 | INFO     | [job] job monitor thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,006 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,013 | INFO     | [job] validate thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,354 | INFO     | [data] control thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,442 | INFO     | [payload] failed_post thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,475 | INFO     | [payload] validate_post thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,507 | INFO     | [payload] control thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:31:52] 2026-01-11 10:29:01,612 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,612 | INFO     | [job] control thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,776 | INFO     | [data] copytool_out thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:01,875 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:02,110 | INFO     | [data] copytool_in thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:02,596 | INFO     | [job] queue monitor thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:03,776 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 11:31:52] 2026-01-11 10:29:30,002 | INFO     | PID=3164634 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 11:31:52] 2026-01-11 10:29:30,003 | INFO     | .. there are 7 such processes running
[2026-01-11 11:31:52] 2026-01-11 10:29:30,003 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 11:31:52] 2026-01-11 10:29:30,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 11:31:52] 2026-01-11 10:29:30,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 11:31:52] 2026-01-11 10:29:43,047 | INFO     | [monitor] cgroup control has ended
[2026-01-11 11:31:52] 2026-01-11 10:29:43,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22692717344576)>', '<ExcThread(monitor, started 22692482750208)>']
[2026-01-11 11:31:52] 2026-01-11 10:29:44,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 11:31:52] 2026-01-11 10:29:44,074 | INFO     | [monitor] control thread has ended
[2026-01-11 11:31:52] 2026-01-11 10:29:48,825 | INFO     | all workflow threads have been joined
[2026-01-11 11:31:52] 2026-01-11 10:29:48,825 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 11:31:52] 2026-01-11 10:29:48,825 | INFO     | traces error code: 0
[2026-01-11 11:31:52] 2026-01-11 10:29:48,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 11:31:52] 2026-01-11 10:29:48,975 [wrapper] ==== pilot stdout END ====
[2026-01-11 11:31:52] 2026-01-11 10:29:48,979 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 11:31:52] 2026-01-11 10:29:48,983 [wrapper] pilotpid: 3164634
[2026-01-11 11:31:52] 2026-01-11 10:29:48,987 [wrapper] Pilot exit status: 0
[2026-01-11 11:31:52] 2026-01-11 10:29:49,004 [wrapper] pandaids: 6963074845
[2026-01-11 11:31:52] 2026-01-11 10:29:49,190 [wrapper] cleanup supervisor_pilot 3511527 3164635
[2026-01-11 11:31:52] 2026-01-11 10:29:49,194 [wrapper] Test setup, not cleaning
[2026-01-11 11:31:52] 2026-01-11 10:29:49,199 [wrapper] apfmon messages muted
[2026-01-11 11:31:52] 2026-01-11 10:29:49,203 [wrapper] ==== wrapper stdout END ====
[2026-01-11 11:31:52] 2026-01-11 10:29:49,207 [wrapper] ==== wrapper stderr END ====
[2026-01-11 11:31:52]  *** Error codes and diagnostics ***
[2026-01-11 11:31:52]     "exeErrorCode": 0,
[2026-01-11 11:31:52]     "exeErrorDiag": "",
[2026-01-11 11:31:52]     "pilotErrorCode": 0,
[2026-01-11 11:31:52]     "pilotErrorDiag": "",
[2026-01-11 11:31:52]  *** Listing of results directory ***
[2026-01-11 11:31:52] total 440540
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:06 pilot3.tar.gz
[2026-01-11 11:31:52] -rwx------ 1 boinc boinc     36322 Jan  8 12:06 runpilot2-wrapper.sh
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:07 queuedata.json
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc       100 Jan 11 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 11:31:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 07:35 run_atlas
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc       105 Jan 11 07:35 job.xml
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc      6689 Jan 11 07:35 init_data.xml
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc 223009538 Jan 11 07:35 EVNT.47898824._000925.pool.root.1
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc     15847 Jan 11 07:35 start_atlas.sh
[2026-01-11 11:31:52] drwxrwx--x 2 boinc boinc      4096 Jan 11 07:35 shared
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc    592397 Jan 11 07:35 input.tar.gz
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc         0 Jan 11 07:35 boinc_lockfile
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc      2519 Jan 11 07:35 pandaJob.out
[2026-01-11 11:31:52] -rw------- 1 boinc boinc    989548 Jan 11 07:35 agis_schedconf.cvmfs.json
[2026-01-11 11:31:52] drwx------ 5 boinc boinc      4096 Jan 11 07:35 pilot3
[2026-01-11 11:31:52] -rw------- 1 boinc boinc 219519227 Jan 11 11:28 HITS.47898826._023211.pool.root.1
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc       528 Jan 11 11:28 boinc_task_state.xml
[2026-01-11 11:31:52] -rw------- 1 boinc boinc        95 Jan 11 11:28 pilot_heartbeat.json
[2026-01-11 11:31:52] -rw------- 1 boinc boinc      1029 Jan 11 11:28 memory_monitor_summary.json
[2026-01-11 11:31:52] -rw------- 1 boinc boinc   1516240 Jan 11 11:28 agis_ddmendpoints.agis.ALL.json
[2026-01-11 11:31:52] -rw------- 1 boinc boinc    396680 Jan 11 11:28 log.47898826._023211.job.log.tgz.1
[2026-01-11 11:31:52] -rw------- 1 boinc boinc      7785 Jan 11 11:28 heartbeat.json
[2026-01-11 11:31:52] -rw------- 1 boinc boinc      4834 Jan 11 11:29 pilotlog.txt
[2026-01-11 11:31:52] -rw------- 1 boinc boinc   1938456 Jan 11 11:29 log.47898826._023211.job.log.1
[2026-01-11 11:31:52] -rw------- 1 boinc boinc       357 Jan 11 11:29 output.list
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc       620 Jan 11 11:29 runtime_log
[2026-01-11 11:31:52] -rw------- 1 boinc boinc   2355200 Jan 11 11:29 result.tar.gz
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc      9206 Jan 11 11:29 runtime_log.err
[2026-01-11 11:31:52] -rw------- 1 boinc boinc       666 Jan 11 11:29 ni2NDm112x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSAkKDmgN4LWn.diag
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc        26 Jan 11 11:31 wrapper_checkpoint.txt
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc      8192 Jan 11 11:31 boinc_mmap_file
[2026-01-11 11:31:52] -rw-r--r-- 1 boinc boinc     21222 Jan 11 11:31 stderr.txt
[2026-01-11 11:31:52] HITS file was successfully produced:
[2026-01-11 11:31:52] -rw------- 1 boinc boinc 219519227 Jan 11 11:28 shared/HITS.pool.root.1
[2026-01-11 11:31:52]  *** Contents of shared directory: ***
[2026-01-11 11:31:52] total 435064
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc 223009538 Jan 11 07:35 ATLAS.root_0
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc     15847 Jan 11 07:35 start_atlas.sh
[2026-01-11 11:31:52] -rw-r--r-- 2 boinc boinc    592397 Jan 11 07:35 input.tar.gz
[2026-01-11 11:31:52] -rw------- 1 boinc boinc 219519227 Jan 11 11:28 HITS.pool.root.1
[2026-01-11 11:31:52] -rw------- 1 boinc boinc   2355200 Jan 11 11:29 result.tar.gz
11:31:53 (3160179): run_atlas exited; CPU time 54234.489164
11:31:53 (3160179): called boinc_finish(0)

</stderr_txt>
]]>

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