Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:51:10 (4041): wrapper (7.7.26015): starting
08:51:10 (4041): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 08:51:10] Arguments: --nthreads 8
[2026-01-08 08:51:10] Threads: 8
[2026-01-08 08:51:10] Checking for CVMFS
[2026-01-08 08:51:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:51:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:51:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:51:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:51:11] 2.11.2.0 2866 135302 115296 154909 2 59 13793077 20275200 1 130560 0 36477594 99.821 9244174 24619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 08:51:11] CVMFS is ok
[2026-01-08 08:51:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:51:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:51:11] Further information can be found at the LHC@home message board.
[2026-01-08 08:51:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:51:11] Checking for apptainer binary...
[2026-01-08 08:51:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:51:11] Running /usr/bin/apptainer --version
[2026-01-08 08:51:11] apptainer version 1.3.2-1.el7
[2026-01-08 08:51:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:51:12] c-204-35.aglt2.org
[2026-01-08 08:51:12] apptainer works
[2026-01-08 08:51:12] Set ATHENA_PROC_NUMBER=8
[2026-01-08 08:51:12] Set ATHENA_CORE_NUMBER=8
[2026-01-08 08:51:12] Starting ATLAS job with PandaID=6962919476
[2026-01-08 08:51:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:47:13]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:47:13] 2026-01-08 16:46:34,923 | INFO     | monitor loop #771: job 0:6962919476 is in state 'finished'
[2026-01-08 11:47:13] 2026-01-08 16:46:34,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:47:13] 2026-01-08 16:46:36,003 | INFO     | time since job start (10506s) is within the limit (174528.0s)
[2026-01-08 11:47:13] 2026-01-08 16:46:37,433 | INFO     | monitor loop #772: job 0:6962919476 is in state 'finished'
[2026-01-08 11:47:13] 2026-01-08 16:46:37,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:47:13] 2026-01-08 16:46:38,009 | INFO     | time since job start (10508s) is within the limit (174528.0s)
[2026-01-08 11:47:13] 2026-01-08 16:46:39,936 | INFO     | monitor loop #773: job 0:6962919476 is in state 'finished'
[2026-01-08 11:47:13] 2026-01-08 16:46:39,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:47:13] 2026-01-08 16:46:40,014 | INFO     | time since job start (10510s) is within the limit (174528.0s)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,417 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 11:47:13] 2026-01-08 16:46:41,421 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-08 11:47:13] 2026-01-08 16:46:41,423 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962919476/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,424 | INFO     | extracted standard info from prmon json
[2026-01-08 11:47:13] 2026-01-08 16:46:41,424 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:47:13] 2026-01-08 16:46:41,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:47:13] 2026-01-08 16:46:41,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:47:13] 2026-01-08 16:46:41,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:47:13] 2026-01-08 16:46:41,430 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:47:13] 2026-01-08 16:46:41,431 | INFO     | sum of square deviations: 1577789583.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,432 | INFO     | sum of deviations: 5089599751.499997
[2026-01-08 11:47:13] 2026-01-08 16:46:41,432 | INFO     | mean x: 1767885536.5
[2026-01-08 11:47:13] 2026-01-08 16:46:41,433 | INFO     | mean y: 2501911.5406976743
[2026-01-08 11:47:13] 2026-01-08 16:46:41,433 | INFO     | intersect: -5700305284.1706705
[2026-01-08 11:47:13] 2026-01-08 16:46:41,433 | INFO     | chi2: 1.5396610435861804
[2026-01-08 11:47:13] 2026-01-08 16:46:41,434 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | sum of deviations: 4954135984.000003
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | mean x: 1767885384.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | mean y: 2501756.916167665
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | intersect: -6062204400.341234
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | chi2: 1.5403643366116977
[2026-01-08 11:47:13] 2026-01-08 16:46:41,435 | INFO     | current chi2=1.5403643366116977 (change=-0.04567843217486319 %)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,436 | INFO     | right removable region: 166
[2026-01-08 11:47:13] 2026-01-08 16:46:41,436 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,437 | INFO     | sum of deviations: -19632438555.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,437 | INFO     | mean x: 1767885689.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,437 | INFO     | mean y: 2529727.844311377
[2026-01-08 11:47:13] 2026-01-08 16:46:41,437 | INFO     | intersect: 24035982162.82133
[2026-01-08 11:47:13] 2026-01-08 16:46:41,438 | INFO     | chi2: 0.14556469045292378
[2026-01-08 11:47:13] 2026-01-08 16:46:41,438 | INFO     | current chi2=0.14556469045292378 (change=90.54566645955565 %)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,438 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 11:47:13] 2026-01-08 16:46:41,439 | INFO     | sum of deviations: -16556559122.0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,439 | INFO     | mean x: 1767885841.5
[2026-01-08 11:47:13] 2026-01-08 16:46:41,439 | INFO     | mean y: 2525949.6666666665
[2026-01-08 11:47:13] 2026-01-08 16:46:41,440 | INFO     | intersect: 22205818591.65562
[2026-01-08 11:47:13] 2026-01-08 16:46:41,440 | INFO     | chi2: 0.13244683754865982
[2026-01-08 11:47:13] 2026-01-08 16:46:41,440 | INFO     | current chi2=0.13244683754865982 (change=9.011699790277316 %)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,440 | INFO     | left removable region: 20
[2026-01-08 11:47:13] 2026-01-08 16:46:41,441 | INFO     | sum of square deviations: 964976232.5
[2026-01-08 11:47:13] 2026-01-08 16:46:41,441 | INFO     | sum of deviations: -4535938893.999998
[2026-01-08 11:47:13] 2026-01-08 16:46:41,442 | INFO     | mean x: 1767885963.5
[2026-01-08 11:47:13] 2026-01-08 16:46:41,442 | INFO     | mean y: 2510157.3561643837
[2026-01-08 11:47:13] 2026-01-08 16:46:41,442 | INFO     | intersect: 8312582915.543304
[2026-01-08 11:47:13] 2026-01-08 16:46:41,442 | INFO     | chi2: 0.06839414470385916
[2026-01-08 11:47:13] 2026-01-08 16:46:41,442 | INFO     | current memory leak: -4.70 B/s (using 146 data points, chi2=0.07)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | ..............................
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | . Timing measurements:
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | . get job = 0 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | . initial setup = 2 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | . payload setup = 8 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,443 | INFO     | . stage-in = 0 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,444 | INFO     | . payload execution = 10472 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,444 | INFO     | . stage-out = 0 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,444 | INFO     | . log creation = 0 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,444 | INFO     | ..............................
[2026-01-08 11:47:13] 2026-01-08 16:46:41,532 | INFO     | 
[2026-01-08 11:47:13] 2026-01-08 16:46:41,532 | INFO     | job summary report
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | --------------------------------------------------
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | PanDA job id: 6962919476
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | task id: 47898826
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | errors: (none)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | pilot state: finished 
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | transexitcode: 0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,533 | INFO     | exeerrorcode: 0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | exeerrordiag: 
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | exitcode: 0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | exitmsg: OK
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | cpuconsumptiontime: 79072 s
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | nevents: 400
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | neventsw: 0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | pid: 14263
[2026-01-08 11:47:13] 2026-01-08 16:46:41,534 | INFO     | pgrp: 14263
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | corecount: 8
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | event service: False
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 10484: 2313175, 10485: 2322173, 10486: 2322357, 10495: 2322615}
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | --------------------------------------------------
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | 
[2026-01-08 11:47:13] 2026-01-08 16:46:41,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 11:47:13] 2026-01-08 16:46:41,562 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,562 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,562 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,565 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,565 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:47:13] 2026-01-08 16:46:41,566 | INFO     | job 6962919476 has completed (purged errors)
[2026-01-08 11:47:13] 2026-01-08 16:46:41,566 | INFO     | overall cleanup function is called
[2026-01-08 11:47:13] 2026-01-08 16:46:42,574 | INFO     | --- collectZombieJob: --- 10, [14263]
[2026-01-08 11:47:13] 2026-01-08 16:46:42,575 | INFO     | zombie collector waiting for pid 14263
[2026-01-08 11:47:13] 2026-01-08 16:46:42,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:47:13] 2026-01-08 16:46:42,575 | INFO     | collected zombie processes
[2026-01-08 11:47:13] 2026-01-08 16:46:42,575 | INFO     | will attempt to kill all subprocesses of pid=14263
[2026-01-08 11:47:13] 2026-01-08 16:46:42,666 | INFO     | process IDs to be killed: [14263] (in reverse order)
[2026-01-08 11:47:13] 2026-01-08 16:46:42,724 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:47:13] 2026-01-08 16:46:42,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:47:13] 2026-01-08 16:46:42,729 | INFO     | did not find any defunct processes belonging to 14263
[2026-01-08 11:47:13] 2026-01-08 16:46:42,733 | INFO     | did not find any defunct processes belonging to 14263
[2026-01-08 11:47:13] 2026-01-08 16:46:42,733 | INFO     | ready for new job
[2026-01-08 11:47:13] 2026-01-08 16:46:42,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:47:13] 2026-01-08 16:46:42,735 | INFO     | ***************************************
[2026-01-08 11:47:13] 2026-01-08 16:46:42,735 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:47:13] 2026-01-08 16:46:42,735 | INFO     | ***************************************
[2026-01-08 11:47:13] 2026-01-08 16:46:42,735 | INFO     | 
[2026-01-08 11:47:13] 2026-01-08 16:46:42,736 | INFO     | architecture information:
[2026-01-08 11:47:13] 2026-01-08 16:46:42,736 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:47:13] 2026-01-08 16:46:42,753 | INFO     | cat /etc/os-release:
[2026-01-08 11:47:13] NAME="CentOS Linux"
[2026-01-08 11:47:13] VERSION="7 (Core)"
[2026-01-08 11:47:13] ID="centos"
[2026-01-08 11:47:13] ID_LIKE="rhel fedora"
[2026-01-08 11:47:13] VERSION_ID="7"
[2026-01-08 11:47:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:47:13] ANSI_COLOR="0;31"
[2026-01-08 11:47:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:47:13] HOME_URL="https://www.centos.org/"
[2026-01-08 11:47:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:47:13] 
[2026-01-08 11:47:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:47:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:47:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:47:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:47:13] 
[2026-01-08 11:47:13] 2026-01-08 16:46:42,754 | INFO     | ***************************************
[2026-01-08 11:47:13] 2026-01-08 16:46:43,257 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 11:47:13] 2026-01-08 16:46:43,276 | INFO     | sufficient remaining disk space (18500026368 B)
[2026-01-08 11:47:13] 2026-01-08 16:46:43,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:47:13] 2026-01-08 16:46:43,277 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:47:13] 2026-01-08 16:46:43,277 | INFO     | update_server=False
[2026-01-08 11:47:13] 2026-01-08 16:46:43,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:47:13] 2026-01-08 16:46:43,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:47:13] 2026-01-08 16:46:43,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:47:13] 2026-01-08 16:46:43,305 | INFO     | all job control threads have been joined
[2026-01-08 11:47:13] 2026-01-08 16:46:43,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:47:13] 2026-01-08 16:46:43,453 | INFO     | aborting loop
[2026-01-08 11:47:13] 2026-01-08 16:46:43,489 | INFO     | all data control threads have been joined
[2026-01-08 11:47:13] 2026-01-08 16:46:43,611 | INFO     | all payload control threads have been joined
[2026-01-08 11:47:13] 2026-01-08 16:46:43,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:47:13] 2026-01-08 16:46:44,283 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,283 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,306 | INFO     | [job] control thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,438 | INFO     | [job] validate thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,454 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,493 | INFO     | [data] control thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,617 | INFO     | [payload] control thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:44,669 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,160 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,285 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,288 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,303 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,324 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:45,776 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:46,720 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:47:13] 2026-01-08 16:46:47,842 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:54,158 | INFO     | job.realtimelogging is not enabled
[2026-01-08 11:47:13] 2026-01-08 16:46:55,162 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:47:13] 2026-01-08 16:46:56,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731703519040)>', '<ExcThread(monitor, started 139731039934208)>']
[2026-01-08 11:47:13] 2026-01-08 16:47:01,294 | INFO     | all workflow threads have been joined
[2026-01-08 11:47:13] 2026-01-08 16:47:01,295 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:47:13] 2026-01-08 16:47:01,295 | INFO     | traces error code: 0
[2026-01-08 11:47:13] 2026-01-08 16:47:01,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:47:13] 2026-01-08 16:47:13,141 | INFO     | PID=7870 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 11:47:13] 2026-01-08 16:47:13,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:47:13] 2026-01-08 16:47:13,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:47:13] 2026-01-08 16:47:13,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:47:13] 2026-01-08 16:47:13,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:47:13] 2026-01-08 16:47:13,142 | INFO     | [monitor] control thread has ended
[2026-01-08 11:47:13] 2026-01-08 16:47:13,271 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:47:13] 2026-01-08 16:47:13,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:47:13] 2026-01-08 16:47:13,282 [wrapper] pilotpid: 7870
[2026-01-08 11:47:13] 2026-01-08 16:47:13,287 [wrapper] Pilot exit status: 0
[2026-01-08 11:47:13] 2026-01-08 16:47:13,305 [wrapper] pandaids: 6962919476
[2026-01-08 11:47:13] 2026-01-08 16:47:13,349 [wrapper] cleanup supervisor_pilot 29987 7871
[2026-01-08 11:47:13] 2026-01-08 16:47:13,355 [wrapper] Test setup, not cleaning
[2026-01-08 11:47:13] 2026-01-08 16:47:13,359 [wrapper] apfmon messages muted
[2026-01-08 11:47:13] 2026-01-08 16:47:13,364 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:47:13] 2026-01-08 16:47:13,368 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:47:13]  *** Error codes and diagnostics ***
[2026-01-08 11:47:13]     "exeErrorCode": 0,
[2026-01-08 11:47:13]     "exeErrorDiag": "",
[2026-01-08 11:47:13]     "pilotErrorCode": 0,
[2026-01-08 11:47:13]     "pilotErrorDiag": "",
[2026-01-08 11:47:13]  *** Listing of results directory ***
[2026-01-08 11:47:13] total 438112
[2026-01-08 11:47:13] -rwx------ 1 boincer umatlas     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas       100 Jan  8 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:47:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 08:51 run_atlas
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas       105 Jan  8 08:51 job.xml
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas 226122709 Jan  8 08:51 EVNT.47898824._000333.pool.root.1
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:51 start_atlas.sh
[2026-01-08 11:47:13] drwxrwx--x 2 boincer umatlas      4096 Jan  8 08:51 shared
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas    592404 Jan  8 08:51 input.tar.gz
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas         0 Jan  8 08:51 boinc_lockfile
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 08:51 pandaJob.out
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas        57 Jan  8 08:51 setup.sh.local
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas    989835 Jan  8 08:51 agis_schedconf.cvmfs.json
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas   1516240 Jan  8 08:51 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:47:13] drwx------ 5 boincer umatlas      4096 Jan  8 08:51 pilot3
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas      5911 Jan  8 11:39 init_data.xml
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas 214856356 Jan  8 11:45 HITS.47898826._021266.pool.root.1
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas       530 Jan  8 11:46 boinc_task_state.xml
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas      1047 Jan  8 11:46 memory_monitor_summary.json
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas    414128 Jan  8 11:46 log.47898826._021266.job.log.tgz.1
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas      7842 Jan  8 11:46 heartbeat.json
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 11:47 boinc_mmap_file
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas        28 Jan  8 11:47 wrapper_checkpoint.txt
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas        95 Jan  8 11:47 pilot_heartbeat.json
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas       744 Jan  8 11:47 pilotlog.txt
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas   1455405 Jan  8 11:47 log.47898826._021266.job.log.1
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas       357 Jan  8 11:47 output.list
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas       620 Jan  8 11:47 runtime_log
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas   1884160 Jan  8 11:47 result.tar.gz
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 11:47 runtime_log.err
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas       662 Jan  8 11:47 EhpMDmKE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmieKDmxla34n.diag
[2026-01-08 11:47:13] -rw-r--r-- 1 boincer umatlas     21296 Jan  8 11:47 stderr.txt
[2026-01-08 11:47:13] HITS file was successfully produced:
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas 214856356 Jan  8 11:45 shared/HITS.pool.root.1
[2026-01-08 11:47:13]  *** Contents of shared directory: ***
[2026-01-08 11:47:13] total 433088
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas 226122709 Jan  8 08:51 ATLAS.root_0
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:51 start_atlas.sh
[2026-01-08 11:47:13] -rw-r--r-- 2 boincer umatlas    592404 Jan  8 08:51 input.tar.gz
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas 214856356 Jan  8 11:45 HITS.pool.root.1
[2026-01-08 11:47:13] -rw------- 1 boincer umatlas   1884160 Jan  8 11:47 result.tar.gz
11:47:15 (4041): run_atlas exited; CPU time 79039.849062
11:47:15 (4041): called boinc_finish(0)

</stderr_txt>
]]>

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