Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:05 (3340827): wrapper (7.7.26015): starting
21:00:05 (3340827): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 21:00:05] Arguments: --nthreads 4
[2026-01-12 21:00:05] Threads: 4
[2026-01-12 21:00:05] Checking for CVMFS
[2026-01-12 21:00:05] No cvmfs_config command found, will try listing directly
[2026-01-12 21:00:05] CVMFS is ok
[2026-01-12 21:00:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 21:00:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 21:00:05] Further information can be found at the LHC@home message board.
[2026-01-12 21:00:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:00:05] Checking for apptainer binary...
[2026-01-12 21:00:05] which: no apptainer in ((null))
[2026-01-12 21:00:05] apptainer is not installed, using version from CVMFS
[2026-01-12 21:00:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:00:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-12 21:00:05] apptainer works
[2026-01-12 21:00:05] Set ATHENA_PROC_NUMBER=4
[2026-01-12 21:00:05] Set ATHENA_CORE_NUMBER=4
[2026-01-12 21:00:05] Starting ATLAS job with PandaID=6962917419
[2026-01-12 21:00:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:16:50]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:16:50] 2026-01-12 23:10:45,838 | INFO     | mean x: 1768253725.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,838 | INFO     | mean y: 2328847.3529411764
[2026-01-13 00:16:50] 2026-01-12 23:10:45,838 | INFO     | intersect: -13145933619.02751
[2026-01-13 00:16:50] 2026-01-12 23:10:45,839 | INFO     | chi2: 1.266581549092285
[2026-01-13 00:16:50] 2026-01-12 23:10:45,839 | INFO     | sum of square deviations: 1869302025.5
[2026-01-13 00:16:50] 2026-01-12 23:10:45,840 | INFO     | sum of deviations: 14564054755.999996
[2026-01-13 00:16:50] 2026-01-12 23:10:45,840 | INFO     | mean x: 1768253572.5
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | mean y: 2328353.208791209
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | intersect: -13774440462.678102
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | chi2: 1.2674278538678752
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | current chi2=1.2674278538678752 (change=-0.06681802495834085 %)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | right removable region: 181
[2026-01-13 00:16:50] 2026-01-12 23:10:45,841 | INFO     | sum of square deviations: 1869302025.5
[2026-01-13 00:16:50] 2026-01-12 23:10:45,842 | INFO     | sum of deviations: -5348325090.500001
[2026-01-13 00:16:50] 2026-01-12 23:10:45,843 | INFO     | mean x: 1768253877.5
[2026-01-13 00:16:50] 2026-01-12 23:10:45,843 | INFO     | mean y: 2348190.401098901
[2026-01-13 00:16:50] 2026-01-12 23:10:45,843 | INFO     | intersect: 5061560907.445879
[2026-01-13 00:16:50] 2026-01-12 23:10:45,843 | INFO     | chi2: 0.04207716258315886
[2026-01-13 00:16:50] 2026-01-12 23:10:45,843 | INFO     | current chi2=0.04207716258315886 (change=96.67789550437442 %)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,844 | INFO     | sum of square deviations: 1719429448.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | sum of deviations: -1264158449.000001
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | mean x: 1768254030.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | mean y: 2344030.107344633
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | intersect: 1302399274.9462135
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | chi2: 0.02487931575455839
[2026-01-13 00:16:50] 2026-01-12 23:10:45,845 | INFO     | current chi2=0.02487931575455839 (change=40.87216383617039 %)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,846 | INFO     | sum of square deviations: 1577789583.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | sum of deviations: 2299177962.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | mean x: 1768254182.5
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | mean y: 2340218.7558139535
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | intersect: -2574385531.890954
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | chi2: 0.001698634534664016
[2026-01-13 00:16:50] 2026-01-12 23:10:45,847 | INFO     | current chi2=0.001698634534664016 (change=93.17250300843666 %)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,848 | INFO     | sum of square deviations: 1444149868.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | sum of deviations: 1788786814.0000002
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | mean x: 1768254335.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | mean y: 2340800.8263473054
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | intersect: -2187895897.132717
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | chi2: 0.0015474956397724642
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | current chi2=0.0015474956397724642 (change=8.89766997004135 %)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,849 | INFO     | left removable region: 40
[2026-01-13 00:16:50] 2026-01-12 23:10:45,850 | INFO     | sum of square deviations: 869188390.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,850 | INFO     | sum of deviations: 310344393.00000024
[2026-01-13 00:16:50] 2026-01-12 23:10:45,851 | INFO     | mean x: 1768254762.0
[2026-01-13 00:16:50] 2026-01-12 23:10:45,851 | INFO     | mean y: 2342407.2411347516
[2026-01-13 00:16:50] 2026-01-12 23:10:45,851 | INFO     | intersect: -629014335.5499762
[2026-01-13 00:16:50] 2026-01-12 23:10:45,851 | INFO     | chi2: 0.0011314951668305422
[2026-01-13 00:16:50] 2026-01-12 23:10:45,851 | INFO     | current memory leak: 0.36 B/s (using 141 data points, chi2=0.00)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | could have reported an average CPU frequency of 2722 MHz (10 samples)
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | ..............................
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . Timing measurements:
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . get job = 0 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . initial setup = 1 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . payload setup = 8 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . stage-in = 0 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,852 | INFO     | . payload execution = 11390 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,853 | INFO     | . stage-out = 1 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,853 | INFO     | . log creation = 0 s
[2026-01-13 00:16:50] 2026-01-12 23:10:45,853 | INFO     | ..............................
[2026-01-13 00:16:50] 2026-01-12 23:10:46,132 | INFO     | 
[2026-01-13 00:16:50] 2026-01-12 23:10:46,132 | INFO     | job summary report
[2026-01-13 00:16:50] 2026-01-12 23:10:46,132 | INFO     | --------------------------------------------------
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | PanDA job id: 6962917419
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | task id: 47898826
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | errors: (none)
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | pilot state: finished 
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | transexitcode: 0
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | exeerrorcode: 0
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | exeerrordiag: 
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | exitcode: 0
[2026-01-13 00:16:50] 2026-01-12 23:10:46,133 | INFO     | exitmsg: OK
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | cpuconsumptiontime: 43967 s
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | nevents: 400
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | neventsw: 0
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | pid: 3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | pgrp: 3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | corecount: 4
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | event service: False
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | sizes: {0: 2283980, 6: 2284242, 11: 2284270, 11400: 2314175, 11401: 2323251, 11409: 2323389}
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | --------------------------------------------------
[2026-01-13 00:16:50] 2026-01-12 23:10:46,134 | INFO     | 
[2026-01-13 00:16:50] 2026-01-12 23:10:46,135 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-01-13 00:16:50] 2026-01-12 23:10:46,167 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:16:50] 2026-01-12 23:10:46,170 | INFO     | job 6962917419 has completed (purged errors)
[2026-01-13 00:16:50] 2026-01-12 23:10:46,170 | INFO     | overall cleanup function is called
[2026-01-13 00:16:50] 2026-01-12 23:10:46,451 | WARNING  | process 3352798 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 00:16:50] 2026-01-12 23:10:47,047 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:16:50] 2026-01-12 23:10:47,179 | INFO     | --- collectZombieJob: --- 10, [3352798]
[2026-01-13 00:16:50] 2026-01-12 23:10:47,179 | INFO     | zombie collector waiting for pid 3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:47,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:16:50] 2026-01-12 23:10:47,180 | INFO     | collected zombie processes
[2026-01-13 00:16:50] 2026-01-12 23:10:47,180 | INFO     | will attempt to kill all subprocesses of pid=3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:48,818 | INFO     | number of running child processes to parent process 3352798: 1
[2026-01-13 00:16:50] 2026-01-12 23:10:48,818 | INFO     | maximum number of monitored processes: 6
[2026-01-13 00:16:50] 2026-01-12 23:10:48,818 | INFO     | aborting job monitoring since job object (job id=6962917419) has expired
[2026-01-13 00:16:50] 2026-01-12 23:10:48,889 | INFO     | process IDs to be killed: [3352798] (in reverse order)
[2026-01-13 00:16:50] 2026-01-12 23:10:49,119 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:16:50] 2026-01-12 23:10:49,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:16:50] 2026-01-12 23:10:49,153 | INFO     | did not find any defunct processes belonging to 3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:49,183 | INFO     | did not find any defunct processes belonging to 3352798
[2026-01-13 00:16:50] 2026-01-12 23:10:49,184 | INFO     | ready for new job
[2026-01-13 00:16:50] 2026-01-12 23:10:49,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:16:50] 2026-01-12 23:10:49,187 | INFO     | ***************************************
[2026-01-13 00:16:50] 2026-01-12 23:10:49,187 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:16:50] 2026-01-12 23:10:49,187 | INFO     | ***************************************
[2026-01-13 00:16:50] 2026-01-12 23:10:49,187 | INFO     | 
[2026-01-13 00:16:50] 2026-01-12 23:10:49,195 | INFO     | architecture information:
[2026-01-13 00:16:50] 2026-01-12 23:10:49,196 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:16:50] 2026-01-12 23:10:49,220 | INFO     | cat /etc/os-release:
[2026-01-13 00:16:50] NAME="CentOS Linux"
[2026-01-13 00:16:50] VERSION="7 (Core)"
[2026-01-13 00:16:50] ID="centos"
[2026-01-13 00:16:50] ID_LIKE="rhel fedora"
[2026-01-13 00:16:50] VERSION_ID="7"
[2026-01-13 00:16:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:16:50] ANSI_COLOR="0;31"
[2026-01-13 00:16:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:16:50] HOME_URL="https://www.centos.org/"
[2026-01-13 00:16:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:16:50] 
[2026-01-13 00:16:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:16:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:16:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:16:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:16:50] 
[2026-01-13 00:16:50] 2026-01-12 23:10:49,221 | INFO     | ***************************************
[2026-01-13 00:16:50] 2026-01-12 23:10:49,724 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-01-13 00:16:50] 2026-01-12 23:10:49,747 | INFO     | sufficient remaining disk space (3364855218176 B)
[2026-01-13 00:16:50] 2026-01-12 23:10:49,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:16:50] 2026-01-12 23:10:49,748 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:16:50] 2026-01-12 23:10:49,748 | INFO     | update_server=False
[2026-01-13 00:16:50] 2026-01-12 23:10:49,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:16:50] 2026-01-12 23:10:49,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:16:50] 2026-01-12 23:10:49,749 | INFO     | will abort loop
[2026-01-13 00:16:50] 2026-01-12 23:10:50,172 | INFO     | all data control threads have been joined
[2026-01-13 00:16:50] 2026-01-12 23:10:50,473 | INFO     | all payload control threads have been joined
[2026-01-13 00:16:50] 2026-01-12 23:10:50,754 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:50,754 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:50,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:16:50] 2026-01-12 23:10:50,871 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:50,895 | INFO     | all job control threads have been joined
[2026-01-13 00:16:50] 2026-01-12 23:10:50,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:16:50] 2026-01-12 23:10:51,154 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,178 | INFO     | [data] control thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,479 | INFO     | [payload] control thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,577 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,823 | INFO     | [job] validate thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,870 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,899 | INFO     | [job] control thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:51,966 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:52,048 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:52,170 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:52,818 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:10:53,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:16:50] 2026-01-12 23:10:57,208 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:11:00,533 | INFO     | job.realtimelogging is not enabled
[2026-01-13 00:16:50] 2026-01-12 23:11:01,539 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:16:50] 2026-01-12 23:11:19,321 | INFO     | PID=3344871 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 00:16:50] 2026-01-12 23:11:19,322 | INFO     | .. there are 6 such processes running
[2026-01-13 00:16:50] 2026-01-12 23:11:19,323 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:16:50] 2026-01-12 23:11:19,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:16:50] 2026-01-12 23:11:19,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:16:50] 2026-01-12 23:11:35,315 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:16:50] 2026-01-12 23:11:36,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22877966878528)>', '<ExcThread(monitor, started 22877732574976)>']
[2026-01-13 00:16:50] 2026-01-12 23:11:37,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:16:50] 2026-01-12 23:11:37,408 | INFO     | [monitor] control thread has ended
[2026-01-13 00:16:50] 2026-01-12 23:11:41,707 | INFO     | all workflow threads have been joined
[2026-01-13 00:16:50] 2026-01-12 23:11:41,707 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:16:50] 2026-01-12 23:11:41,708 | INFO     | traces error code: 0
[2026-01-13 00:16:50] 2026-01-12 23:11:41,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:16:50] 2026-01-12 23:11:41,867 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:16:50] 2026-01-12 23:11:41,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:16:50] 2026-01-12 23:11:41,875 [wrapper] pilotpid: 3344871
[2026-01-13 00:16:50] 2026-01-12 23:11:41,878 [wrapper] Pilot exit status: 0
[2026-01-13 00:16:50] 2026-01-12 23:11:41,892 [wrapper] pandaids: 6962917419
[2026-01-13 00:16:50] 2026-01-12 23:11:42,041 [wrapper] cleanup supervisor_pilot 3592055 3344872
[2026-01-13 00:16:50] 2026-01-12 23:11:42,045 [wrapper] Test setup, not cleaning
[2026-01-13 00:16:50] 2026-01-12 23:11:42,048 [wrapper] apfmon messages muted
[2026-01-13 00:16:50] 2026-01-12 23:11:42,051 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:16:50] 2026-01-12 23:11:42,054 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:16:50]  *** Error codes and diagnostics ***
[2026-01-13 00:16:50]     "exeErrorCode": 0,
[2026-01-13 00:16:50]     "exeErrorDiag": "",
[2026-01-13 00:16:50]     "pilotErrorCode": 0,
[2026-01-13 00:16:50]     "pilotErrorDiag": "",
[2026-01-13 00:16:50]  *** Listing of results directory ***
[2026-01-13 00:16:50] total 443124
[2026-01-13 00:16:50] -rwx------ 1 boinc boinc     36322 Jan  8 09:06 runpilot2-wrapper.sh
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc       100 Jan 12 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:16:50] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 20:59 run_atlas
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc       105 Jan 12 20:59 job.xml
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc 224229941 Jan 12 21:00 EVNT.47898824._000647.pool.root.1
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc      6689 Jan 12 21:00 init_data.xml
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:00 start_atlas.sh
[2026-01-13 00:16:50] drwxrwx--x 2 boinc boinc      4096 Jan 12 21:00 shared
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc    592405 Jan 12 21:00 input.tar.gz
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc         0 Jan 12 21:00 boinc_lockfile
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc      2519 Jan 12 21:00 pandaJob.out
[2026-01-13 00:16:50] -rw------- 1 boinc boinc    988547 Jan 12 21:00 agis_schedconf.cvmfs.json
[2026-01-13 00:16:50] drwx------ 5 boinc boinc      4096 Jan 12 21:00 pilot3
[2026-01-13 00:16:50] -rw------- 1 boinc boinc 221661383 Jan 13 00:10 HITS.47898826._019619.pool.root.1
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc       528 Jan 13 00:10 boinc_task_state.xml
[2026-01-13 00:16:50] -rw------- 1 boinc boinc      1023 Jan 13 00:10 memory_monitor_summary.json
[2026-01-13 00:16:50] -rw------- 1 boinc boinc   1516240 Jan 13 00:10 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:16:50] -rw------- 1 boinc boinc    371129 Jan 13 00:10 log.47898826._019619.job.log.tgz.1
[2026-01-13 00:16:50] -rw------- 1 boinc boinc      7779 Jan 13 00:10 heartbeat.json
[2026-01-13 00:16:50] -rw------- 1 boinc boinc        95 Jan 13 00:11 pilot_heartbeat.json
[2026-01-13 00:16:50] -rw------- 1 boinc boinc      4909 Jan 13 00:11 pilotlog.txt
[2026-01-13 00:16:50] -rw------- 1 boinc boinc   1604115 Jan 13 00:11 log.47898826._019619.job.log.1
[2026-01-13 00:16:50] -rw------- 1 boinc boinc       357 Jan 13 00:11 output.list
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc       620 Jan 13 00:11 runtime_log
[2026-01-13 00:16:50] -rw------- 1 boinc boinc   1996800 Jan 13 00:11 result.tar.gz
[2026-01-13 00:16:50] -rw------- 1 boinc boinc       664 Jan 13 00:11 f61NDmBD0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIdeKDmBqx8Oo.diag
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc      9206 Jan 13 00:11 runtime_log.err
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc        26 Jan 13 00:16 wrapper_checkpoint.txt
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc      8192 Jan 13 00:16 boinc_mmap_file
[2026-01-13 00:16:50] -rw-r--r-- 1 boinc boinc     20838 Jan 13 00:16 stderr.txt
[2026-01-13 00:16:50] HITS file was successfully produced:
[2026-01-13 00:16:50] -rw------- 1 boinc boinc 221661383 Jan 13 00:10 shared/HITS.pool.root.1
[2026-01-13 00:16:50]  *** Contents of shared directory: ***
[2026-01-13 00:16:50] total 438000
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc 224229941 Jan 12 21:00 ATLAS.root_0
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:00 start_atlas.sh
[2026-01-13 00:16:50] -rw-r--r-- 2 boinc boinc    592405 Jan 12 21:00 input.tar.gz
[2026-01-13 00:16:50] -rw------- 1 boinc boinc 221661383 Jan 13 00:10 HITS.pool.root.1
[2026-01-13 00:16:50] -rw------- 1 boinc boinc   1996800 Jan 13 00:11 result.tar.gz
00:16:51 (3340827): run_atlas exited; CPU time 44669.022687
00:16:51 (3340827): called boinc_finish(0)

</stderr_txt>
]]>

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