Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:02 (1123582): wrapper (7.7.26015): starting
07:04:02 (1123582): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 07:04:02] Arguments: --nthreads 4
[2026-01-10 07:04:02] Threads: 4
[2026-01-10 07:04:02] Checking for CVMFS
[2026-01-10 07:04:02] No cvmfs_config command found, will try listing directly
[2026-01-10 07:04:02] CVMFS is ok
[2026-01-10 07:04:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 07:04:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 07:04:03] Further information can be found at the LHC@home message board.
[2026-01-10 07:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:04:03] Checking for apptainer binary...
[2026-01-10 07:04:03] which: no apptainer in ((null))
[2026-01-10 07:04:03] apptainer is not installed, using version from CVMFS
[2026-01-10 07:04:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:04:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-10 07:04:03] apptainer works
[2026-01-10 07:04:03] Set ATHENA_PROC_NUMBER=4
[2026-01-10 07:04:03] Set ATHENA_CORE_NUMBER=4
[2026-01-10 07:04:03] Starting ATLAS job with PandaID=6962918102
[2026-01-10 07:04:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:06:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:06:25] 2026-01-10 10:03:06,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,893 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 11:06:25] 2026-01-10 10:03:06,912 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2754.6244765624997
[2026-01-10 11:06:25] 2026-01-10 10:03:06,935 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6962918102/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,936 | INFO     | extracted standard info from prmon json
[2026-01-10 11:06:25] 2026-01-10 10:03:06,936 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:06:25] 2026-01-10 10:03:06,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:06:25] 2026-01-10 10:03:06,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:06:25] 2026-01-10 10:03:06,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:06:25] 2026-01-10 10:03:06,940 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:06:25] 2026-01-10 10:03:06,941 | INFO     | sum of square deviations: 4024149870.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,942 | INFO     | sum of deviations: 18892584988.000008
[2026-01-10 11:06:25] 2026-01-10 10:03:06,942 | INFO     | mean x: 1768032230.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,943 | INFO     | mean y: 2311408.9872340425
[2026-01-10 11:06:25] 2026-01-10 10:03:06,943 | INFO     | intersect: -8298249018.897173
[2026-01-10 11:06:25] 2026-01-10 10:03:06,943 | INFO     | chi2: 2.0416370320559283
[2026-01-10 11:06:25] 2026-01-10 10:03:06,943 | INFO     | sum of square deviations: 3772712597.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | sum of deviations: 32848013464.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | mean x: 1768032077.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | mean y: 2319719.913043478
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | intersect: -15391469227.855825
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | chi2: 1.2540633001054367
[2026-01-10 11:06:25] 2026-01-10 10:03:06,945 | INFO     | current chi2=1.2540633001054367 (change=38.57559985368236 %)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,946 | INFO     | sum of square deviations: 3531973200.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,947 | INFO     | sum of deviations: 31938796386.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,947 | INFO     | mean x: 1768031925.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,947 | INFO     | mean y: 2319143.68
[2026-01-10 11:06:25] 2026-01-10 10:03:06,947 | INFO     | intersect: -15985574438.44645
[2026-01-10 11:06:25] 2026-01-10 10:03:06,948 | INFO     | chi2: 1.2545172203666695
[2026-01-10 11:06:25] 2026-01-10 10:03:06,948 | INFO     | current chi2=1.2545172203666695 (change=-0.03619596085737027 %)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,948 | INFO     | right removable region: 224
[2026-01-10 11:06:25] 2026-01-10 10:03:06,948 | INFO     | sum of square deviations: 3772712597.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,950 | INFO     | sum of deviations: -8274126467.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,950 | INFO     | mean x: 1768032382.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,950 | INFO     | mean y: 2327682.752173913
[2026-01-10 11:06:25] 2026-01-10 10:03:06,950 | INFO     | intersect: 3879888762.049398
[2026-01-10 11:06:25] 2026-01-10 10:03:06,951 | INFO     | chi2: 0.8089727779986566
[2026-01-10 11:06:25] 2026-01-10 10:03:06,951 | INFO     | current chi2=0.8089727779986566 (change=60.376268391643485 %)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,951 | INFO     | sum of square deviations: 3531973200.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | sum of deviations: -6347963780.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | mean x: 1768032535.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | mean y: 2326459.9111111113
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | intersect: 3179985478.9664035
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | chi2: 0.8060769691225014
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | current chi2=0.8060769691225014 (change=0.3579612262503187 %)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,953 | INFO     | left removable region: 20
[2026-01-10 11:06:25] 2026-01-10 10:03:06,954 | INFO     | sum of square deviations: 2632440055.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,955 | INFO     | sum of deviations: 5837461795.0
[2026-01-10 11:06:25] 2026-01-10 10:03:06,955 | INFO     | mean x: 1768032504.5
[2026-01-10 11:06:25] 2026-01-10 10:03:06,955 | INFO     | mean y: 2336111.9509803923
[2026-01-10 11:06:25] 2026-01-10 10:03:06,955 | INFO     | intersect: -3918293411.1159434
[2026-01-10 11:06:25] 2026-01-10 10:03:06,955 | INFO     | chi2: 0.0005771115724981346
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | current memory leak: 2.22 B/s (using 204 data points, chi2=0.00)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | could have reported an average CPU frequency of 2714 MHz (11 samples)
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | ..............................
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | . Timing measurements:
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | . get job = 0 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,956 | INFO     | . initial setup = 1 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | . payload setup = 9 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | . stage-in = 0 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | . payload execution = 14286 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | . stage-out = 1 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | . log creation = 0 s
[2026-01-10 11:06:25] 2026-01-10 10:03:06,957 | INFO     | ..............................
[2026-01-10 11:06:25] 2026-01-10 10:03:06,981 | INFO     | time since job start (14328s) is within the limit (174528.0s)
[2026-01-10 11:06:25] 2026-01-10 10:03:07,043 | INFO     | 
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | job summary report
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | --------------------------------------------------
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | PanDA job id: 6962918102
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | task id: 47898826
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | errors: (none)
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | pilot state: finished 
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | transexitcode: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | exeerrorcode: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | exeerrordiag: 
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | exitcode: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:07,044 | INFO     | exitmsg: OK
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | cpuconsumptiontime: 54951 s
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | nevents: 400
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | neventsw: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | pid: 1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | pgrp: 1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | corecount: 4
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | event service: False
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | sizes: {0: 2283754, 1: 2284009, 8: 2284271, 12: 2284299, 14299: 2315494, 14300: 2315493, 14301: 2324699, 14303: 2324783, 14311: 2324977}
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | --------------------------------------------------
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | 
[2026-01-10 11:06:25] 2026-01-10 10:03:07,045 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-10 11:06:25] 2026-01-10 10:03:07,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:06:25] 2026-01-10 10:03:07,077 | INFO     | job 6962918102 has completed (purged errors)
[2026-01-10 11:06:25] 2026-01-10 10:03:07,077 | INFO     | overall cleanup function is called
[2026-01-10 11:06:25] 2026-01-10 10:03:08,086 | INFO     | --- collectZombieJob: --- 10, [1136075]
[2026-01-10 11:06:25] 2026-01-10 10:03:08,086 | INFO     | zombie collector waiting for pid 1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:08,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:06:25] 2026-01-10 10:03:08,086 | INFO     | collected zombie processes
[2026-01-10 11:06:25] 2026-01-10 10:03:08,087 | INFO     | will attempt to kill all subprocesses of pid=1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:08,854 | INFO     | process IDs to be killed: [1136075] (in reverse order)
[2026-01-10 11:06:25] 2026-01-10 10:03:09,085 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:06:25] 2026-01-10 10:03:09,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:06:25] 2026-01-10 10:03:09,120 | INFO     | did not find any defunct processes belonging to 1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:09,154 | INFO     | did not find any defunct processes belonging to 1136075
[2026-01-10 11:06:25] 2026-01-10 10:03:09,154 | INFO     | ready for new job
[2026-01-10 11:06:25] 2026-01-10 10:03:09,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:06:25] 2026-01-10 10:03:09,157 | INFO     | ***************************************
[2026-01-10 11:06:25] 2026-01-10 10:03:09,157 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:06:25] 2026-01-10 10:03:09,157 | INFO     | ***************************************
[2026-01-10 11:06:25] 2026-01-10 10:03:09,157 | INFO     | 
[2026-01-10 11:06:25] 2026-01-10 10:03:09,166 | INFO     | architecture information:
[2026-01-10 11:06:25] 2026-01-10 10:03:09,166 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:06:25] 2026-01-10 10:03:09,189 | INFO     | cat /etc/os-release:
[2026-01-10 11:06:25] NAME="CentOS Linux"
[2026-01-10 11:06:25] VERSION="7 (Core)"
[2026-01-10 11:06:25] ID="centos"
[2026-01-10 11:06:25] ID_LIKE="rhel fedora"
[2026-01-10 11:06:25] VERSION_ID="7"
[2026-01-10 11:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:06:25] ANSI_COLOR="0;31"
[2026-01-10 11:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:06:25] HOME_URL="https://www.centos.org/"
[2026-01-10 11:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:06:25] 
[2026-01-10 11:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:06:25] 
[2026-01-10 11:06:25] 2026-01-10 10:03:09,189 | INFO     | ***************************************
[2026-01-10 11:06:25] 2026-01-10 10:03:09,692 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-10 11:06:25] 2026-01-10 10:03:09,714 | INFO     | sufficient remaining disk space (3300279713792 B)
[2026-01-10 11:06:25] 2026-01-10 10:03:09,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:06:25] 2026-01-10 10:03:09,714 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:06:25] 2026-01-10 10:03:09,714 | INFO     | update_server=False
[2026-01-10 11:06:25] 2026-01-10 10:03:09,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:06:25] 2026-01-10 10:03:09,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:06:25] 2026-01-10 10:03:09,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:06:25] 2026-01-10 10:03:09,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:06:25] 2026-01-10 10:03:09,716 | INFO     | aborting loop
[2026-01-10 11:06:25] 2026-01-10 10:03:10,093 | INFO     | all payload control threads have been joined
[2026-01-10 11:06:25] 2026-01-10 10:03:10,717 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:10,719 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:10,760 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:10,761 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:10,804 | INFO     | all data control threads have been joined
[2026-01-10 11:06:25] 2026-01-10 10:03:10,988 | INFO     | all job control threads have been joined
[2026-01-10 11:06:25] 2026-01-10 10:03:11,098 | INFO     | [payload] control thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,227 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,262 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,557 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,673 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,721 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,809 | INFO     | [data] control thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:11,994 | INFO     | [job] control thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:12,027 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:12,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:06:25] 2026-01-10 10:03:12,186 | INFO     | [job] validate thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:13,059 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:13,721 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:06:25] 2026-01-10 10:03:40,907 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:06:25] 2026-01-10 10:03:41,095 | INFO     | PID=1128131 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:06:25] 2026-01-10 10:03:41,095 | INFO     | .. there are 3 such processes running
[2026-01-10 11:06:25] 2026-01-10 10:03:41,096 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:06:25] 2026-01-10 10:03:41,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:06:25] 2026-01-10 10:03:41,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:06:25] 2026-01-10 10:03:41,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23232691070784)>', '<ExcThread(monitor, started 23232451147520)>']
[2026-01-10 11:06:25] 2026-01-10 10:03:42,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:06:25] 2026-01-10 10:03:42,101 | INFO     | [monitor] control thread has ended
[2026-01-10 11:06:25] 2026-01-10 10:03:46,899 | INFO     | all workflow threads have been joined
[2026-01-10 11:06:25] 2026-01-10 10:03:46,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:06:25] 2026-01-10 10:03:46,899 | INFO     | traces error code: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:46,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:06:25] 2026-01-10 10:03:47,014 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:06:25] 2026-01-10 10:03:47,018 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:06:25] 2026-01-10 10:03:47,020 [wrapper] pilotpid: 1128131
[2026-01-10 11:06:25] 2026-01-10 10:03:47,022 [wrapper] Pilot exit status: 0
[2026-01-10 11:06:25] 2026-01-10 10:03:47,034 [wrapper] pandaids: 6962918102
[2026-01-10 11:06:25] 2026-01-10 10:03:47,212 [wrapper] cleanup supervisor_pilot 1420007 1128132
[2026-01-10 11:06:25] 2026-01-10 10:03:47,217 [wrapper] Test setup, not cleaning
[2026-01-10 11:06:25] 2026-01-10 10:03:47,220 [wrapper] apfmon messages muted
[2026-01-10 11:06:25] 2026-01-10 10:03:47,224 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:06:25] 2026-01-10 10:03:47,227 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:06:25]  *** Error codes and diagnostics ***
[2026-01-10 11:06:25]     "exeErrorCode": 0,
[2026-01-10 11:06:25]     "exeErrorDiag": "",
[2026-01-10 11:06:25]     "pilotErrorCode": 0,
[2026-01-10 11:06:25]     "pilotErrorDiag": "",
[2026-01-10 11:06:25]  *** Listing of results directory ***
[2026-01-10 11:06:25] total 445488
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-10 11:06:25] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc       100 Jan 10 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:06:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 07:03 run_atlas
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc       105 Jan 10 07:03 job.xml
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc 224346679 Jan 10 07:04 EVNT.47898824._000782.pool.root.1
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc      6692 Jan 10 07:04 init_data.xml
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc    592404 Jan 10 07:04 input.tar.gz
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 07:04 start_atlas.sh
[2026-01-10 11:06:25] drwxrwx--x 2 boinc boinc      4096 Jan 10 07:04 shared
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc         0 Jan 10 07:04 boinc_lockfile
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc      2519 Jan 10 07:04 pandaJob.out
[2026-01-10 11:06:25] -rw------- 1 boinc boinc    989374 Jan 10 07:04 agis_schedconf.cvmfs.json
[2026-01-10 11:06:25] drwx------ 5 boinc boinc      4096 Jan 10 07:04 pilot3
[2026-01-10 11:06:25] -rw------- 1 boinc boinc 223113997 Jan 10 11:02 HITS.47898826._020173.pool.root.1
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc       528 Jan 10 11:02 boinc_task_state.xml
[2026-01-10 11:06:25] -rw------- 1 boinc boinc      1033 Jan 10 11:02 memory_monitor_summary.json
[2026-01-10 11:06:25] -rw------- 1 boinc boinc   1516240 Jan 10 11:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:06:25] -rw------- 1 boinc boinc    418248 Jan 10 11:02 log.47898826._020173.job.log.tgz.1
[2026-01-10 11:06:25] -rw------- 1 boinc boinc        95 Jan 10 11:03 pilot_heartbeat.json
[2026-01-10 11:06:25] -rw------- 1 boinc boinc      7785 Jan 10 11:03 heartbeat.json
[2026-01-10 11:06:25] -rw------- 1 boinc boinc      4835 Jan 10 11:03 pilotlog.txt
[2026-01-10 11:06:25] -rw------- 1 boinc boinc   1982695 Jan 10 11:03 log.47898826._020173.job.log.1
[2026-01-10 11:06:25] -rw------- 1 boinc boinc       357 Jan 10 11:03 output.list
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:03 runtime_log
[2026-01-10 11:06:25] -rw------- 1 boinc boinc   2416640 Jan 10 11:03 result.tar.gz
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc      9223 Jan 10 11:03 runtime_log.err
[2026-01-10 11:06:25] -rw------- 1 boinc boinc       666 Jan 10 11:03 4ieMDmEB0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3ejKDmiMBtXm.diag
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc        26 Jan 10 11:06 wrapper_checkpoint.txt
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:06 boinc_mmap_file
[2026-01-10 11:06:25] -rw-r--r-- 1 boinc boinc     20916 Jan 10 11:06 stderr.txt
[2026-01-10 11:06:25] HITS file was successfully produced:
[2026-01-10 11:06:25] -rw------- 1 boinc boinc 223113997 Jan 10 11:02 shared/HITS.pool.root.1
[2026-01-10 11:06:25]  *** Contents of shared directory: ***
[2026-01-10 11:06:25] total 439944
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc 224346679 Jan 10 07:04 ATLAS.root_0
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc    592404 Jan 10 07:04 input.tar.gz
[2026-01-10 11:06:25] -rw-r--r-- 2 boinc boinc     15847 Jan 10 07:04 start_atlas.sh
[2026-01-10 11:06:25] -rw------- 1 boinc boinc 223113997 Jan 10 11:02 HITS.pool.root.1
[2026-01-10 11:06:25] -rw------- 1 boinc boinc   2416640 Jan 10 11:03 result.tar.gz
11:06:26 (1123582): run_atlas exited; CPU time 55988.436861
11:06:26 (1123582): called boinc_finish(0)

</stderr_txt>
]]>

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