Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:16:15 (3206249): wrapper (7.7.26015): starting
02:16:15 (3206249): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 02:16:15] Arguments: --nthreads 4
[2026-01-11 02:16:15] Threads: 4
[2026-01-11 02:16:15] Checking for CVMFS
[2026-01-11 02:16:15] No cvmfs_config command found, will try listing directly
[2026-01-11 02:16:15] CVMFS is ok
[2026-01-11 02:16:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:16:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:16:15] Further information can be found at the LHC@home message board.
[2026-01-11 02:16:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:16:15] Checking for apptainer binary...
[2026-01-11 02:16:15] which: no apptainer in ((null))
[2026-01-11 02:16:15] apptainer is not installed, using version from CVMFS
[2026-01-11 02:16:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:16:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-11 02:16:15] apptainer works
[2026-01-11 02:16:15] Set ATHENA_PROC_NUMBER=4
[2026-01-11 02:16:15] Set ATHENA_CORE_NUMBER=4
[2026-01-11 02:16:15] Starting ATLAS job with PandaID=6962918612
[2026-01-11 02:16:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:03:34]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:03:34] 2026-01-11 05:01:57,215 | INFO     | time since job start (13527s) is within the limit (174528.0s)
[2026-01-11 06:03:34] 2026-01-11 05:01:57,558 | INFO     | number of running child processes to parent process 3238392: 1
[2026-01-11 06:03:34] 2026-01-11 05:01:57,558 | INFO     | maximum number of monitored processes: 6
[2026-01-11 06:03:34] 2026-01-11 05:01:59,119 | INFO     | PID=3215522 has CPU usage=22.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 06:03:34] 2026-01-11 05:01:59,119 | INFO     | .. there are 10 such processes running
[2026-01-11 06:03:34] 2026-01-11 05:02:00,064 | INFO     | monitor loop #921: job 0:6962918612 is in state 'finished'
[2026-01-11 06:03:34] 2026-01-11 05:02:00,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:03:34] 2026-01-11 05:02:00,120 | INFO     | time since job start (13530s) is within the limit (174528.0s)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,250 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 06:03:34] 2026-01-11 05:02:01,271 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2733.8420312499993
[2026-01-11 06:03:34] 2026-01-11 05:02:01,295 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6962918612/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,296 | INFO     | extracted standard info from prmon json
[2026-01-11 06:03:34] 2026-01-11 05:02:01,296 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:03:34] 2026-01-11 05:02:01,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:03:34] 2026-01-11 05:02:01,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 06:03:34] 2026-01-11 05:02:01,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 06:03:34] 2026-01-11 05:02:01,300 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:03:34] 2026-01-11 05:02:01,301 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,302 | INFO     | sum of deviations: 14722166939.000002
[2026-01-11 06:03:34] 2026-01-11 05:02:01,302 | INFO     | mean x: 1768100936.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,302 | INFO     | mean y: 2326056.2352941176
[2026-01-11 06:03:34] 2026-01-11 05:02:01,303 | INFO     | intersect: -7775038188.185712
[2026-01-11 06:03:34] 2026-01-11 05:02:01,303 | INFO     | chi2: 1.290960131625717
[2026-01-11 06:03:34] 2026-01-11 05:02:01,303 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,305 | INFO     | sum of deviations: 14480891351.500006
[2026-01-11 06:03:34] 2026-01-11 05:02:01,305 | INFO     | mean x: 1768100783.5
[2026-01-11 06:03:34] 2026-01-11 05:02:01,305 | INFO     | mean y: 2325890.5231481483
[2026-01-11 06:03:34] 2026-01-11 05:02:01,305 | INFO     | intersect: -8191220987.502309
[2026-01-11 06:03:34] 2026-01-11 05:02:01,305 | INFO     | chi2: 1.2915998936424686
[2026-01-11 06:03:34] 2026-01-11 05:02:01,306 | INFO     | current chi2=1.2915998936424686 (change=-0.04955707005032564 %)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,306 | INFO     | right removable region: 215
[2026-01-11 06:03:34] 2026-01-11 05:02:01,306 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | sum of deviations: -11596924201.500002
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | mean x: 1768101088.5
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | mean y: 2343899.699074074
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | intersect: 6564091803.921564
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | chi2: 0.013236999391162095
[2026-01-11 06:03:34] 2026-01-11 05:02:01,308 | INFO     | current chi2=0.013236999391162095 (change=98.974639180027 %)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,309 | INFO     | sum of square deviations: 2912836010.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,310 | INFO     | sum of deviations: -9269719820.000002
[2026-01-11 06:03:34] 2026-01-11 05:02:01,310 | INFO     | mean x: 1768101241.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,310 | INFO     | mean y: 2342223.2654028437
[2026-01-11 06:03:34] 2026-01-11 05:02:01,310 | INFO     | intersect: 5629093286.901251
[2026-01-11 06:03:34] 2026-01-11 05:02:01,311 | INFO     | chi2: 0.011030899437126974
[2026-01-11 06:03:34] 2026-01-11 05:02:01,311 | INFO     | current chi2=0.011030899437126974 (change=16.66616344719379 %)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,311 | INFO     | left removable region: 20
[2026-01-11 06:03:34] 2026-01-11 05:02:01,311 | INFO     | sum of square deviations: 2299168690.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,313 | INFO     | sum of deviations: -6644117987.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,313 | INFO     | mean x: 1768101363.0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,313 | INFO     | mean y: 2340626.8615384614
[2026-01-11 06:03:34] 2026-01-11 05:02:01,313 | INFO     | intersect: 5111784801.1154585
[2026-01-11 06:03:34] 2026-01-11 05:02:01,313 | INFO     | chi2: 0.010062563598592969
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | current memory leak: -2.89 B/s (using 195 data points, chi2=0.01)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | could have reported an average CPU frequency of 2706 MHz (11 samples)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | ..............................
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | . Timing measurements:
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | . get job = 0 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | . initial setup = 1 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,314 | INFO     | . payload setup = 9 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,315 | INFO     | . stage-in = 0 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,315 | INFO     | . payload execution = 13488 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,315 | INFO     | . stage-out = 0 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,315 | INFO     | . log creation = 0 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,315 | INFO     | ..............................
[2026-01-11 06:03:34] 2026-01-11 05:02:01,416 | INFO     | 
[2026-01-11 06:03:34] 2026-01-11 05:02:01,417 | INFO     | job summary report
[2026-01-11 06:03:34] 2026-01-11 05:02:01,417 | INFO     | --------------------------------------------------
[2026-01-11 06:03:34] 2026-01-11 05:02:01,417 | INFO     | PanDA job id: 6962918612
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | task id: 47898826
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | errors: (none)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | pilot state: finished 
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | transexitcode: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | exeerrorcode: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | exeerrordiag: 
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | exitcode: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | exitmsg: OK
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | cpuconsumptiontime: 52062 s
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | nevents: 400
[2026-01-11 06:03:34] 2026-01-11 05:02:01,418 | INFO     | neventsw: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | pid: 3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | pgrp: 3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | corecount: 4
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | event service: False
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | sizes: {0: 2283810, 1: 2284009, 7: 2284271, 12: 2284299, 13501: 2315241, 13504: 2324263, 13505: 2324447, 13513: 2324641}
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | --------------------------------------------------
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | 
[2026-01-11 06:03:34] 2026-01-11 05:02:01,419 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-11 06:03:34] 2026-01-11 05:02:01,448 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,448 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,448 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,448 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | job 6962918612 has completed (purged errors)
[2026-01-11 06:03:34] 2026-01-11 05:02:01,450 | INFO     | overall cleanup function is called
[2026-01-11 06:03:34] 2026-01-11 05:02:02,459 | INFO     | --- collectZombieJob: --- 10, [3238392]
[2026-01-11 06:03:34] 2026-01-11 05:02:02,459 | INFO     | zombie collector waiting for pid 3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:02,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:03:34] 2026-01-11 05:02:02,459 | INFO     | collected zombie processes
[2026-01-11 06:03:34] 2026-01-11 05:02:02,460 | INFO     | will attempt to kill all subprocesses of pid=3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:03,204 | INFO     | process IDs to be killed: [3238392] (in reverse order)
[2026-01-11 06:03:34] 2026-01-11 05:02:03,441 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:03:34] 2026-01-11 05:02:03,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:03:34] 2026-01-11 05:02:03,468 | INFO     | did not find any defunct processes belonging to 3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:03,493 | INFO     | did not find any defunct processes belonging to 3238392
[2026-01-11 06:03:34] 2026-01-11 05:02:03,493 | INFO     | ready for new job
[2026-01-11 06:03:34] 2026-01-11 05:02:03,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:03:34] 2026-01-11 05:02:03,496 | INFO     | ***************************************
[2026-01-11 06:03:34] 2026-01-11 05:02:03,496 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:03:34] 2026-01-11 05:02:03,496 | INFO     | ***************************************
[2026-01-11 06:03:34] 2026-01-11 05:02:03,496 | INFO     | 
[2026-01-11 06:03:34] 2026-01-11 05:02:03,504 | INFO     | architecture information:
[2026-01-11 06:03:34] 2026-01-11 05:02:03,504 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:03:34] 2026-01-11 05:02:03,526 | INFO     | cat /etc/os-release:
[2026-01-11 06:03:34] NAME="CentOS Linux"
[2026-01-11 06:03:34] VERSION="7 (Core)"
[2026-01-11 06:03:34] ID="centos"
[2026-01-11 06:03:34] ID_LIKE="rhel fedora"
[2026-01-11 06:03:34] VERSION_ID="7"
[2026-01-11 06:03:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:03:34] ANSI_COLOR="0;31"
[2026-01-11 06:03:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:03:34] HOME_URL="https://www.centos.org/"
[2026-01-11 06:03:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:03:34] 
[2026-01-11 06:03:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:03:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:03:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:03:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:03:34] 
[2026-01-11 06:03:34] 2026-01-11 05:02:03,526 | INFO     | ***************************************
[2026-01-11 06:03:34] 2026-01-11 05:02:04,029 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-11 06:03:34] 2026-01-11 05:02:04,054 | INFO     | sufficient remaining disk space (3338162667520 B)
[2026-01-11 06:03:34] 2026-01-11 05:02:04,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:03:34] 2026-01-11 05:02:04,055 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:03:34] 2026-01-11 05:02:04,055 | INFO     | update_server=False
[2026-01-11 06:03:34] 2026-01-11 05:02:04,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:03:34] 2026-01-11 05:02:04,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:03:34] 2026-01-11 05:02:04,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:03:34] 2026-01-11 05:02:04,057 | INFO     | aborting loop
[2026-01-11 06:03:34] 2026-01-11 05:02:04,253 | INFO     | all payload control threads have been joined
[2026-01-11 06:03:34] 2026-01-11 05:02:04,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:03:34] 2026-01-11 05:02:04,848 | INFO     | all data control threads have been joined
[2026-01-11 06:03:34] 2026-01-11 05:02:04,959 | INFO     | all job control threads have been joined
[2026-01-11 06:03:34] 2026-01-11 05:02:05,061 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,062 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,258 | INFO     | [payload] control thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,267 | INFO     | [job] validate thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,628 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,692 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,738 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,853 | INFO     | [data] control thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:05,963 | INFO     | [job] control thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:06,062 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:06,143 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:06,389 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:06,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:03:34] 2026-01-11 05:02:07,432 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:08,413 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:14,124 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:03:34] 2026-01-11 05:02:15,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:03:34] 2026-01-11 05:02:34,029 | INFO     | PID=3215522 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:03:34] 2026-01-11 05:02:34,031 | INFO     | .. there are 10 such processes running
[2026-01-11 06:03:34] 2026-01-11 05:02:34,032 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:03:34] 2026-01-11 05:02:34,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:03:34] 2026-01-11 05:02:34,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:03:34] 2026-01-11 05:02:52,680 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:03:34] 2026-01-11 05:02:53,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23166458689344)>', '<ExcThread(monitor, started 23166216791808)>']
[2026-01-11 06:03:34] 2026-01-11 05:02:54,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:03:34] 2026-01-11 05:02:54,132 | INFO     | [monitor] control thread has ended
[2026-01-11 06:03:34] 2026-01-11 05:02:58,767 | INFO     | all workflow threads have been joined
[2026-01-11 06:03:34] 2026-01-11 05:02:58,767 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:03:34] 2026-01-11 05:02:58,767 | INFO     | traces error code: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:58,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:03:34] 2026-01-11 05:02:58,922 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:03:34] 2026-01-11 05:02:58,927 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:03:34] 2026-01-11 05:02:58,931 [wrapper] pilotpid: 3215522
[2026-01-11 06:03:34] 2026-01-11 05:02:58,935 [wrapper] Pilot exit status: 0
[2026-01-11 06:03:34] 2026-01-11 05:02:58,950 [wrapper] pandaids: 6962918612
[2026-01-11 06:03:34] 2026-01-11 05:02:59,109 [wrapper] cleanup supervisor_pilot 3696670 3215523
[2026-01-11 06:03:34] 2026-01-11 05:02:59,114 [wrapper] Test setup, not cleaning
[2026-01-11 06:03:34] 2026-01-11 05:02:59,118 [wrapper] apfmon messages muted
[2026-01-11 06:03:34] 2026-01-11 05:02:59,122 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:03:34] 2026-01-11 05:02:59,127 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:03:34]  *** Error codes and diagnostics ***
[2026-01-11 06:03:34]     "exeErrorCode": 0,
[2026-01-11 06:03:34]     "exeErrorDiag": "",
[2026-01-11 06:03:34]     "pilotErrorCode": 0,
[2026-01-11 06:03:34]     "pilotErrorDiag": "",
[2026-01-11 06:03:34]  *** Listing of results directory ***
[2026-01-11 06:03:34] total 438140
[2026-01-11 06:03:34] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc       100 Jan 11 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:03:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 02:16 run_atlas
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc       105 Jan 11 02:16 job.xml
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc 224668912 Jan 11 02:16 EVNT.47898824._000802.pool.root.1
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc      6692 Jan 11 02:16 init_data.xml
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:16 start_atlas.sh
[2026-01-11 06:03:34] drwxrwx--x 2 boinc boinc      4096 Jan 11 02:16 shared
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:16 input.tar.gz
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc         0 Jan 11 02:16 boinc_lockfile
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc      2519 Jan 11 02:16 pandaJob.out
[2026-01-11 06:03:34] -rw------- 1 boinc boinc    989545 Jan 11 02:16 agis_schedconf.cvmfs.json
[2026-01-11 06:03:34] drwx------ 5 boinc boinc      4096 Jan 11 02:16 pilot3
[2026-01-11 06:03:34] -rw------- 1 boinc boinc 215531494 Jan 11 06:01 HITS.47898826._020660.pool.root.1
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc       529 Jan 11 06:01 boinc_task_state.xml
[2026-01-11 06:03:34] -rw------- 1 boinc boinc      1031 Jan 11 06:01 memory_monitor_summary.json
[2026-01-11 06:03:34] -rw------- 1 boinc boinc   1516240 Jan 11 06:01 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:03:34] -rw------- 1 boinc boinc    391703 Jan 11 06:01 log.47898826._020660.job.log.tgz.1
[2026-01-11 06:03:34] -rw------- 1 boinc boinc      7786 Jan 11 06:02 heartbeat.json
[2026-01-11 06:03:34] -rw------- 1 boinc boinc        95 Jan 11 06:02 pilot_heartbeat.json
[2026-01-11 06:03:34] -rw------- 1 boinc boinc      4908 Jan 11 06:02 pilotlog.txt
[2026-01-11 06:03:34] -rw------- 1 boinc boinc   1879033 Jan 11 06:02 log.47898826._020660.job.log.1
[2026-01-11 06:03:34] -rw------- 1 boinc boinc       357 Jan 11 06:02 output.list
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc       620 Jan 11 06:02 runtime_log
[2026-01-11 06:03:34] -rw------- 1 boinc boinc   2293760 Jan 11 06:02 result.tar.gz
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc      9223 Jan 11 06:02 runtime_log.err
[2026-01-11 06:03:34] -rw------- 1 boinc boinc       667 Jan 11 06:02 Y3GNDmbB0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIhjKDmbcc6Mo.diag
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc        26 Jan 11 06:03 wrapper_checkpoint.txt
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc      8192 Jan 11 06:03 boinc_mmap_file
[2026-01-11 06:03:34] -rw-r--r-- 1 boinc boinc     21154 Jan 11 06:03 stderr.txt
[2026-01-11 06:03:34] HITS file was successfully produced:
[2026-01-11 06:03:34] -rw------- 1 boinc boinc 215531494 Jan 11 06:01 shared/HITS.pool.root.1
[2026-01-11 06:03:34]  *** Contents of shared directory: ***
[2026-01-11 06:03:34] total 432728
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc 224668912 Jan 11 02:16 ATLAS.root_0
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:16 start_atlas.sh
[2026-01-11 06:03:34] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:16 input.tar.gz
[2026-01-11 06:03:34] -rw------- 1 boinc boinc 215531494 Jan 11 06:01 HITS.pool.root.1
[2026-01-11 06:03:34] -rw------- 1 boinc boinc   2293760 Jan 11 06:02 result.tar.gz
06:03:35 (3206249): run_atlas exited; CPU time 52933.476122
06:03:35 (3206249): called boinc_finish(0)

</stderr_txt>
]]>

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