Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:48:35 (771): wrapper (7.7.26015): starting
08:48:35 (771): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 08:48:35] Arguments: --nthreads 8
[2026-01-08 08:48:35] Threads: 8
[2026-01-08 08:48:35] Checking for CVMFS
[2026-01-08 08:48:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:48:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:48:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:48:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:48:36] 2.11.2.0 2840 129635 79940 154909 3 59 18567332 20275201 1 130560 0 31132621 99.813 8346886 30753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 08:48:36] CVMFS is ok
[2026-01-08 08:48:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:48:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:48:36] Further information can be found at the LHC@home message board.
[2026-01-08 08:48:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:48:36] Checking for apptainer binary...
[2026-01-08 08:48:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:48:36] Running /usr/bin/apptainer --version
[2026-01-08 08:48:36] apptainer version 1.3.2-1.el7
[2026-01-08 08:48:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:48:37] c-204-39.aglt2.org
[2026-01-08 08:48:37] apptainer works
[2026-01-08 08:48:37] Set ATHENA_PROC_NUMBER=8
[2026-01-08 08:48:37] Set ATHENA_CORE_NUMBER=8
[2026-01-08 08:48:37] Starting ATLAS job with PandaID=6962917726
[2026-01-08 08:48:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:52:30]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:52:30] 2026-01-08 16:51:57,767 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-08 11:52:30] 2026-01-08 16:51:57,768 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962917726/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,769 | INFO     | extracted standard info from prmon json
[2026-01-08 11:52:30] 2026-01-08 16:51:57,769 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:52:30] 2026-01-08 16:51:57,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:52:30] 2026-01-08 16:51:57,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:52:30] 2026-01-08 16:51:57,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:52:30] 2026-01-08 16:51:57,773 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:52:30] 2026-01-08 16:51:57,773 | INFO     | sum of square deviations: 1808350185.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,774 | INFO     | sum of deviations: -8569537420.000002
[2026-01-08 11:52:30] 2026-01-08 16:51:57,774 | INFO     | mean x: 1767885625.5
[2026-01-08 11:52:30] 2026-01-08 16:51:57,774 | INFO     | mean y: 2505279.2555555557
[2026-01-08 11:52:30] 2026-01-08 16:51:57,775 | INFO     | intersect: 8380286390.275465
[2026-01-08 11:52:30] 2026-01-08 16:51:57,775 | INFO     | chi2: 2.3416904433423276
[2026-01-08 11:52:30] 2026-01-08 16:51:57,775 | INFO     | sum of square deviations: 1661798600.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,776 | INFO     | sum of deviations: 3535947533.000004
[2026-01-08 11:52:30] 2026-01-08 16:51:57,776 | INFO     | mean x: 1767885473.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,776 | INFO     | mean y: 2517596.4742857143
[2026-01-08 11:52:30] 2026-01-08 16:51:57,777 | INFO     | intersect: -3759159827.5414133
[2026-01-08 11:52:30] 2026-01-08 16:51:57,777 | INFO     | chi2: 1.575624155016541
[2026-01-08 11:52:30] 2026-01-08 16:51:57,777 | INFO     | current chi2=1.575624155016541 (change=32.714242418497015 %)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,778 | INFO     | sum of square deviations: 1523386702.5
[2026-01-08 11:52:30] 2026-01-08 16:51:57,778 | INFO     | sum of deviations: 3482561644.5000014
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | mean x: 1767885320.5
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | mean y: 2517537.6411764706
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | intersect: -4038983939.918092
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | chi2: 1.576200919975839
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | current chi2=1.576200919975839 (change=-0.03660549106598219 %)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,779 | INFO     | right removable region: 169
[2026-01-08 11:52:30] 2026-01-08 16:51:57,780 | INFO     | sum of square deviations: 1661798600.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,781 | INFO     | sum of deviations: -34783728843.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,781 | INFO     | mean x: 1767885778.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,781 | INFO     | mean y: 2532193.5428571426
[2026-01-08 11:52:30] 2026-01-08 16:51:57,781 | INFO     | intersect: 37006811489.08932
[2026-01-08 11:52:30] 2026-01-08 16:51:57,781 | INFO     | chi2: 0.9420460130443209
[2026-01-08 11:52:30] 2026-01-08 16:51:57,782 | INFO     | current chi2=0.9420460130443209 (change=59.770685501038066 %)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,782 | INFO     | sum of square deviations: 1523386702.5
[2026-01-08 11:52:30] 2026-01-08 16:51:57,783 | INFO     | sum of deviations: -32144972848.000008
[2026-01-08 11:52:30] 2026-01-08 16:51:57,783 | INFO     | mean x: 1767885930.5
[2026-01-08 11:52:30] 2026-01-08 16:51:57,783 | INFO     | mean y: 2529236.5764705883
[2026-01-08 11:52:30] 2026-01-08 16:51:57,783 | INFO     | intersect: 37306678695.81972
[2026-01-08 11:52:30] 2026-01-08 16:51:57,783 | INFO     | chi2: 0.9325514432220754
[2026-01-08 11:52:30] 2026-01-08 16:51:57,784 | INFO     | current chi2=0.9325514432220754 (change=1.007866886625081 %)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,784 | INFO     | left removable region: 20
[2026-01-08 11:52:30] 2026-01-08 16:51:57,784 | INFO     | sum of square deviations: 1025693650.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,785 | INFO     | sum of deviations: -8914344678.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,785 | INFO     | mean x: 1767885900.0
[2026-01-08 11:52:30] 2026-01-08 16:51:57,785 | INFO     | mean y: 2529414.302013423
[2026-01-08 11:52:30] 2026-01-08 16:51:57,785 | INFO     | intersect: 15367296724.674112
[2026-01-08 11:52:30] 2026-01-08 16:51:57,785 | INFO     | chi2: 0.09800056579125323
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | current memory leak: -8.69 B/s (using 149 data points, chi2=0.10)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | ..............................
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | . Timing measurements:
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | . get job = 0 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,786 | INFO     | . initial setup = 2 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | . payload setup = 8 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | . stage-in = 0 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | . payload execution = 10944 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | . stage-out = 2 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | . log creation = 0 s
[2026-01-08 11:52:30] 2026-01-08 16:51:57,787 | INFO     | ..............................
[2026-01-08 11:52:30] 2026-01-08 16:51:58,100 | INFO     | 
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | job summary report
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | --------------------------------------------------
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | PanDA job id: 6962917726
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | task id: 47898826
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | errors: (none)
[2026-01-08 11:52:30] 2026-01-08 16:51:58,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | pilot state: finished 
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | transexitcode: 0
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | exeerrorcode: 0
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | exeerrordiag: 
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | exitcode: 0
[2026-01-08 11:52:30] 2026-01-08 16:51:58,102 | INFO     | exitmsg: OK
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | cpuconsumptiontime: 81557 s
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | nevents: 400
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | neventsw: 0
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | pid: 11222
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | pgrp: 11222
[2026-01-08 11:52:30] 2026-01-08 16:51:58,103 | INFO     | corecount: 8
[2026-01-08 11:52:30] 2026-01-08 16:51:58,104 | INFO     | event service: False
[2026-01-08 11:52:30] 2026-01-08 16:51:58,104 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 10956: 2313344, 10957: 2313343, 10960: 2322581, 10966: 2322783}
[2026-01-08 11:52:30] 2026-01-08 16:51:58,104 | INFO     | --------------------------------------------------
[2026-01-08 11:52:30] 2026-01-08 16:51:58,104 | INFO     | 
[2026-01-08 11:52:30] 2026-01-08 16:51:58,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 11:52:30] 2026-01-08 16:51:58,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:52:30] 2026-01-08 16:51:58,137 | INFO     | job 6962917726 has completed (purged errors)
[2026-01-08 11:52:30] 2026-01-08 16:51:58,138 | INFO     | overall cleanup function is called
[2026-01-08 11:52:30] 2026-01-08 16:51:58,291 | INFO     | PID=4799 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 11:52:30] 2026-01-08 16:51:59,141 | INFO     | --- collectZombieJob: --- 10, [11222]
[2026-01-08 11:52:30] 2026-01-08 16:51:59,141 | INFO     | zombie collector waiting for pid 11222
[2026-01-08 11:52:30] 2026-01-08 16:51:59,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:52:30] 2026-01-08 16:51:59,142 | INFO     | collected zombie processes
[2026-01-08 11:52:30] 2026-01-08 16:51:59,142 | INFO     | will attempt to kill all subprocesses of pid=11222
[2026-01-08 11:52:30] 2026-01-08 16:51:59,230 | INFO     | process IDs to be killed: [11222] (in reverse order)
[2026-01-08 11:52:30] 2026-01-08 16:51:59,287 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:52:30] 2026-01-08 16:51:59,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:52:30] 2026-01-08 16:51:59,292 | INFO     | did not find any defunct processes belonging to 11222
[2026-01-08 11:52:30] 2026-01-08 16:51:59,296 | INFO     | did not find any defunct processes belonging to 11222
[2026-01-08 11:52:30] 2026-01-08 16:51:59,296 | INFO     | ready for new job
[2026-01-08 11:52:30] 2026-01-08 16:51:59,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:52:30] 2026-01-08 16:51:59,299 | INFO     | ***************************************
[2026-01-08 11:52:30] 2026-01-08 16:51:59,299 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:52:30] 2026-01-08 16:51:59,299 | INFO     | ***************************************
[2026-01-08 11:52:30] 2026-01-08 16:51:59,299 | INFO     | 
[2026-01-08 11:52:30] 2026-01-08 16:51:59,300 | INFO     | architecture information:
[2026-01-08 11:52:30] 2026-01-08 16:51:59,300 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:52:30] 2026-01-08 16:51:59,318 | INFO     | cat /etc/os-release:
[2026-01-08 11:52:30] NAME="CentOS Linux"
[2026-01-08 11:52:30] VERSION="7 (Core)"
[2026-01-08 11:52:30] ID="centos"
[2026-01-08 11:52:30] ID_LIKE="rhel fedora"
[2026-01-08 11:52:30] VERSION_ID="7"
[2026-01-08 11:52:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:52:30] ANSI_COLOR="0;31"
[2026-01-08 11:52:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:52:30] HOME_URL="https://www.centos.org/"
[2026-01-08 11:52:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:52:30] 
[2026-01-08 11:52:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:52:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:52:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:52:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:52:30] 
[2026-01-08 11:52:30] 2026-01-08 16:51:59,318 | INFO     | ***************************************
[2026-01-08 11:52:30] 2026-01-08 16:51:59,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 11:52:30] 2026-01-08 16:51:59,841 | INFO     | sufficient remaining disk space (18507366400 B)
[2026-01-08 11:52:30] 2026-01-08 16:51:59,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:52:30] 2026-01-08 16:51:59,842 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:52:30] 2026-01-08 16:51:59,842 | INFO     | update_server=False
[2026-01-08 11:52:30] 2026-01-08 16:51:59,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:52:30] 2026-01-08 16:51:59,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:52:30] 2026-01-08 16:51:59,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:52:30] 2026-01-08 16:51:59,863 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 11:52:30] 2026-01-08 16:51:59,863 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 11:52:30] 2026-01-08 16:51:59,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:52:30] 2026-01-08 16:51:59,864 | INFO     | will abort loop
[2026-01-08 11:52:30] 2026-01-08 16:52:00,130 | INFO     | all data control threads have been joined
[2026-01-08 11:52:30] 2026-01-08 16:52:00,589 | INFO     | all payload control threads have been joined
[2026-01-08 11:52:30] 2026-01-08 16:52:00,629 | INFO     | all job control threads have been joined
[2026-01-08 11:52:30] 2026-01-08 16:52:00,848 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:00,848 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:00,869 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,136 | INFO     | [data] control thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,414 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,417 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,562 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,595 | INFO     | [payload] control thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,635 | INFO     | [job] control thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,737 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,748 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:01,849 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:02,008 | INFO     | [job] validate thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:02,324 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:02,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:52:30] 2026-01-08 16:52:06,384 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:10,429 | INFO     | job.realtimelogging is not enabled
[2026-01-08 11:52:30] 2026-01-08 16:52:11,434 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:52:30] 2026-01-08 16:52:12,351 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:52:30] 2026-01-08 16:52:13,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446583572288)>', '<ExcThread(monitor, started 140445514438400)>']
[2026-01-08 11:52:30] 2026-01-08 16:52:18,375 | INFO     | all workflow threads have been joined
[2026-01-08 11:52:30] 2026-01-08 16:52:18,375 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:52:30] 2026-01-08 16:52:18,376 | INFO     | traces error code: 0
[2026-01-08 11:52:30] 2026-01-08 16:52:18,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:52:30] 2026-01-08 16:52:30,500 | INFO     | PID=4799 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 11:52:30] 2026-01-08 16:52:30,501 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:52:30] 2026-01-08 16:52:30,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:52:30] 2026-01-08 16:52:30,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:52:30] 2026-01-08 16:52:30,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:52:30] 2026-01-08 16:52:30,501 | INFO     | [monitor] control thread has ended
[2026-01-08 11:52:30] 2026-01-08 16:52:30,599 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:52:30] 2026-01-08 16:52:30,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:52:30] 2026-01-08 16:52:30,609 [wrapper] pilotpid: 4799
[2026-01-08 11:52:30] 2026-01-08 16:52:30,613 [wrapper] Pilot exit status: 0
[2026-01-08 11:52:30] 2026-01-08 16:52:30,632 [wrapper] pandaids: 6962917726
[2026-01-08 11:52:30] 2026-01-08 16:52:30,675 [wrapper] cleanup supervisor_pilot 28523 4800
[2026-01-08 11:52:30] 2026-01-08 16:52:30,680 [wrapper] Test setup, not cleaning
[2026-01-08 11:52:30] 2026-01-08 16:52:30,685 [wrapper] apfmon messages muted
[2026-01-08 11:52:30] 2026-01-08 16:52:30,690 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:52:30] 2026-01-08 16:52:30,695 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:52:30]  *** Error codes and diagnostics ***
[2026-01-08 11:52:30]     "exeErrorCode": 0,
[2026-01-08 11:52:30]     "exeErrorDiag": "",
[2026-01-08 11:52:30]     "pilotErrorCode": 0,
[2026-01-08 11:52:30]     "pilotErrorDiag": "",
[2026-01-08 11:52:30]  *** Listing of results directory ***
[2026-01-08 11:52:30] total 438896
[2026-01-08 11:52:30] -rwx------ 1 boincer umatlas     36322 Jan  8 03:06 runpilot2-wrapper.sh
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:10 pilot3.tar.gz
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:10 queuedata.json
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas       100 Jan  8 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:52:30] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 08:48 run_atlas
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas       105 Jan  8 08:48 job.xml
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas 221861355 Jan  8 08:48 EVNT.47898824._000658.pool.root.1
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:48 start_atlas.sh
[2026-01-08 11:52:30] drwxrwx--x 2 boincer umatlas      4096 Jan  8 08:48 shared
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 08:48 input.tar.gz
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas         0 Jan  8 08:48 boinc_lockfile
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 08:48 pandaJob.out
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas        57 Jan  8 08:48 setup.sh.local
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas    989835 Jan  8 08:48 agis_schedconf.cvmfs.json
[2026-01-08 11:52:30] drwx------ 5 boincer umatlas      4096 Jan  8 08:48 pilot3
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas      5911 Jan  8 11:49 init_data.xml
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas 219786844 Jan  8 11:51 HITS.47898826._019887.pool.root.1
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas       530 Jan  8 11:51 boinc_task_state.xml
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas        95 Jan  8 11:51 pilot_heartbeat.json
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas      1050 Jan  8 11:51 memory_monitor_summary.json
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas   1516240 Jan  8 11:51 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas    412948 Jan  8 11:51 log.47898826._019887.job.log.tgz.1
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas      7846 Jan  8 11:51 heartbeat.json
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 11:52 boinc_mmap_file
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas        28 Jan  8 11:52 wrapper_checkpoint.txt
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas       744 Jan  8 11:52 pilotlog.txt
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas   1519864 Jan  8 11:52 log.47898826._019887.job.log.1
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas       357 Jan  8 11:52 output.list
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas       620 Jan  8 11:52 runtime_log
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas   1955840 Jan  8 11:52 result.tar.gz
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 11:52 runtime_log.err
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas       662 Jan  8 11:52 DhkLDmND0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpdeKDmCr71Em.diag
[2026-01-08 11:52:30] -rw-r--r-- 1 boincer umatlas     21167 Jan  8 11:52 stderr.txt
[2026-01-08 11:52:30] HITS file was successfully produced:
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas 219786844 Jan  8 11:51 shared/HITS.pool.root.1
[2026-01-08 11:52:30]  *** Contents of shared directory: ***
[2026-01-08 11:52:30] total 433812
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas 221861355 Jan  8 08:48 ATLAS.root_0
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:48 start_atlas.sh
[2026-01-08 11:52:30] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 08:48 input.tar.gz
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas 219786844 Jan  8 11:51 HITS.pool.root.1
[2026-01-08 11:52:30] -rw------- 1 boincer umatlas   1955840 Jan  8 11:52 result.tar.gz
11:52:32 (771): run_atlas exited; CPU time 81516.165706
11:52:32 (771): called boinc_finish(0)

</stderr_txt>
]]>

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