Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:22:36 (140066): wrapper (7.7.26015): starting
05:22:36 (140066): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:22:36] Arguments: --nthreads 8
[2026-01-08 05:22:36] Threads: 8
[2026-01-08 05:22:36] Checking for CVMFS
[2026-01-08 05:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:22:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:22:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:22:37] 2.11.3.0 1215219 90358 121668 154909 1 154 41966073 45568000 15079 130560 0 468697189 99.788 299946240 20320 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-08 05:22:37] CVMFS is ok
[2026-01-08 05:22:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 05:22:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 05:22:37] Further information can be found at the LHC@home message board.
[2026-01-08 05:22:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:22:37] Checking for apptainer binary...
[2026-01-08 05:22:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:22:37] Running /usr/bin/apptainer --version
[2026-01-08 05:22:37] apptainer version 1.4.1-1.el9
[2026-01-08 05:22:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:22:37] wns0018.triumf.lcg
[2026-01-08 05:22:37] apptainer works
[2026-01-08 05:22:37] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:22:37] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:22:37] Starting ATLAS job with PandaID=6962917316
[2026-01-08 05:22:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:27:28]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | WARNING  | wrong length of table data, x=[1767878631.0], y=[9137.0] (must be same and length>=4)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . Timing measurements:
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . get job = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . initial setup = 3 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . payload setup = 15 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-in = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . payload execution = 58 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-out = 1 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . log creation = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:27:28] 2026-01-08 13:26:52,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962917316/pilotlog.txt
[2026-01-08 05:27:28] 2026-01-08 13:26:53,045 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 05:27:28] - Log from pilotlog.txt -
[2026-01-08 05:27:28] 2026-01-08 13:26:52,986 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962917316/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | INFO     | extracted standard info from prmon json
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | WARNING  | wrong length of table data, x=[1767878631.0], y=[9137.0] (must be same and length>=4)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . Timing measurements:
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . get job = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . initial setup = 3 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . payload setup = 15 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-in = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . payload execution = 58 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-out = 1 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . log creation = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:27:28] 2026-01-08 13:26:52,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962917316/pilotlog.txt
[2026-01-08 05:27:28] 2026-01-08 13:26:53,046 | WARNING  | 
[2026-01-08 05:27:28] [begin log extracts]
[2026-01-08 05:27:28] - Log from pilotlog.txt -
[2026-01-08 05:27:28] 2026-01-08 13:26:52,986 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962917316/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | INFO     | extracted standard info from prmon json
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:27:28] 2026-01-08 13:26:52,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | WARNING  | wrong length of table data, x=[1767878631.0], y=[9137.0] (must be same and length>=4)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . Timing measurements:
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . get job = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . initial setup = 3 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,988 | INFO     | . payload setup = 15 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-in = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . payload execution = 58 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . stage-out = 1 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | . log creation = 0 s
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | ..............................
[2026-01-08 05:27:28] 2026-01-08 13:26:52,989 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:27:28] 2026-01-08 13:26:52,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962917316/pilotlog.txt
[2026-01-08 05:27:28] [end log extracts]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,046 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,047 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 05:27:28] 2026-01-08 13:26:53,203 | INFO     | 
[2026-01-08 05:27:28] 2026-01-08 13:26:53,203 | INFO     | job summary report
[2026-01-08 05:27:28] 2026-01-08 13:26:53,203 | INFO     | --------------------------------------------------
[2026-01-08 05:27:28] 2026-01-08 13:26:53,203 | INFO     | PanDA job id: 6962917316
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | task id: 47898826
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 05:24:26,841 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | pilot state: failed 
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | transexitcode: 65
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | exeerrorcode: 65
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | exitcode: 65
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | cpuconsumptiontime: 18 s
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | nevents: 0
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | neventsw: 0
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | pid: 164036
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | pgrp: 164036
[2026-01-08 05:27:28] 2026-01-08 13:26:53,204 | INFO     | corecount: 8
[2026-01-08 05:27:28] 2026-01-08 13:26:53,205 | INFO     | event service: False
[2026-01-08 05:27:28] 2026-01-08 13:26:53,205 | INFO     | sizes: {0: 2283966, 6: 2284228, 11: 2284256, 78: 2307523, 79: 2307527, 81: 2311875, 82: 2312031, 215: 2312225}
[2026-01-08 05:27:28] 2026-01-08 13:26:53,205 | INFO     | --------------------------------------------------
[2026-01-08 05:27:28] 2026-01-08 13:26:53,205 | INFO     | 
[2026-01-08 05:27:28] 2026-01-08 13:26:53,205 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 05:27:28] 2026-01-08 13:26:53,284 | INFO     | time since job start (235s) is within the limit (174528.0s)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,475 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | job 6962917316 has completed (purged errors)
[2026-01-08 05:27:28] 2026-01-08 13:26:53,477 | INFO     | overall cleanup function is called
[2026-01-08 05:27:28] 2026-01-08 13:26:54,484 | INFO     | --- collectZombieJob: --- 10, [164036]
[2026-01-08 05:27:28] 2026-01-08 13:26:54,484 | INFO     | zombie collector waiting for pid 164036
[2026-01-08 05:27:28] 2026-01-08 13:26:54,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:27:28] 2026-01-08 13:26:54,484 | INFO     | collected zombie processes
[2026-01-08 05:27:28] 2026-01-08 13:26:54,485 | INFO     | will attempt to kill all subprocesses of pid=164036
[2026-01-08 05:27:28] 2026-01-08 13:26:55,452 | INFO     | process IDs to be killed: [164036] (in reverse order)
[2026-01-08 05:27:28] 2026-01-08 13:26:55,905 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:27:28] 2026-01-08 13:26:55,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:27:28] 2026-01-08 13:26:55,930 | INFO     | did not find any defunct processes belonging to 164036
[2026-01-08 05:27:28] 2026-01-08 13:26:55,946 | INFO     | did not find any defunct processes belonging to 164036
[2026-01-08 05:27:28] 2026-01-08 13:26:55,946 | INFO     | ready for new job
[2026-01-08 05:27:28] 2026-01-08 13:26:55,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:27:28] 2026-01-08 13:26:55,954 | INFO     | ***************************************
[2026-01-08 05:27:28] 2026-01-08 13:26:55,954 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:27:28] 2026-01-08 13:26:55,954 | INFO     | ***************************************
[2026-01-08 05:27:28] 2026-01-08 13:26:55,954 | INFO     | 
[2026-01-08 05:27:28] 2026-01-08 13:26:55,956 | INFO     | architecture information:
[2026-01-08 05:27:28] 2026-01-08 13:26:55,970 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:27:28] 2026-01-08 13:26:56,031 | INFO     | cat /etc/os-release:
[2026-01-08 05:27:28] NAME="CentOS Linux"
[2026-01-08 05:27:28] VERSION="7 (Core)"
[2026-01-08 05:27:28] ID="centos"
[2026-01-08 05:27:28] ID_LIKE="rhel fedora"
[2026-01-08 05:27:28] VERSION_ID="7"
[2026-01-08 05:27:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:27:28] ANSI_COLOR="0;31"
[2026-01-08 05:27:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:27:28] HOME_URL="https://www.centos.org/"
[2026-01-08 05:27:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:27:28] 
[2026-01-08 05:27:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:27:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:27:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:27:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:27:28] 
[2026-01-08 05:27:28] 2026-01-08 13:26:56,031 | INFO     | ***************************************
[2026-01-08 05:27:28] 2026-01-08 13:26:56,535 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 05:27:28] 2026-01-08 13:26:56,634 | INFO     | sufficient remaining disk space (1274331267072 B)
[2026-01-08 05:27:28] 2026-01-08 13:26:56,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:27:28] 2026-01-08 13:26:56,635 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:27:28] 2026-01-08 13:26:56,635 | INFO     | update_server=False
[2026-01-08 05:27:28] 2026-01-08 13:26:56,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:27:28] 2026-01-08 13:26:56,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:27:28] 2026-01-08 13:26:56,647 | INFO     | aborting loop
[2026-01-08 05:27:28] 2026-01-08 13:26:57,201 | INFO     | all data control threads have been joined
[2026-01-08 05:27:28] 2026-01-08 13:26:57,398 | INFO     | all payload control threads have been joined
[2026-01-08 05:27:28] 2026-01-08 13:26:57,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:27:28] 2026-01-08 13:26:57,641 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:57,653 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:57,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:27:28] 2026-01-08 13:26:57,918 | INFO     | all job control threads have been joined
[2026-01-08 05:27:28] 2026-01-08 13:26:58,091 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,171 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,210 | INFO     | [data] control thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,211 | INFO     | [job] validate thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:27:28] 2026-01-08 13:26:58,404 | INFO     | [payload] control thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,489 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:27:28] 2026-01-08 13:26:58,516 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,635 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,636 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,801 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,889 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:58,924 | INFO     | [job] control thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:59,250 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:26:59,865 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:27:01,610 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:27:28] 2026-01-08 13:27:01,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689595516736)>', '<ExcThread(monitor, started 139688828458752)>']
[2026-01-08 05:27:28] 2026-01-08 13:27:06,912 | INFO     | all workflow threads have been joined
[2026-01-08 05:27:28] 2026-01-08 13:27:06,912 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:27:28] 2026-01-08 13:27:06,913 | INFO     | traces error code: 0
[2026-01-08 05:27:28] 2026-01-08 13:27:06,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:27:28] 2026-01-08 13:27:26,842 | INFO     | PID=147141 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 05:27:28] 2026-01-08 13:27:26,842 | INFO     | .. there are 33 such processes running
[2026-01-08 05:27:28] 2026-01-08 13:27:26,843 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:27:28] 2026-01-08 13:27:26,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:27:28] 2026-01-08 13:27:26,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:27:28] 2026-01-08 13:27:26,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:27:28] 2026-01-08 13:27:26,843 | INFO     | [monitor] control thread has ended
[2026-01-08 05:27:28] 2026-01-08 13:27:27,094 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:27:28] 2026-01-08 13:27:27,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:27:28] 2026-01-08 13:27:27,099 [wrapper] pilotpid: 147141
[2026-01-08 05:27:28] 2026-01-08 13:27:27,100 [wrapper] Pilot exit status: 0
[2026-01-08 05:27:28] 2026-01-08 13:27:27,110 [wrapper] pandaids: 6962917316
[2026-01-08 05:27:28] 2026-01-08 13:27:27,176 [wrapper] cleanup supervisor_pilot  147182 147142
[2026-01-08 05:27:28] 2026-01-08 13:27:27,221 [wrapper] Test setup, not cleaning
[2026-01-08 05:27:28] 2026-01-08 13:27:27,229 [wrapper] apfmon messages muted
[2026-01-08 05:27:28] 2026-01-08 13:27:27,263 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:27:28] 2026-01-08 13:27:27,314 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:27:28]  *** Error codes and diagnostics ***
[2026-01-08 05:27:28]     "exeErrorCode": 65,
[2026-01-08 05:27:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 05:27:28]     "pilotErrorCode": 1305,
[2026-01-08 05:27:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 05:27:28]  *** Listing of results directory ***
[2026-01-08 05:27:28] total 223132
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc    579449 Jan  7 23:56 pilot3.tar.gz
[2026-01-08 05:27:28] -rwx------. 1 boinc boinc     36322 Jan  8 00:03 runpilot2-wrapper.sh
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc      5112 Jan  8 00:07 queuedata.json
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:27:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:22 run_atlas
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:22 job.xml
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc 224347278 Jan  8 05:22 EVNT.47898824._000643.pool.root.1
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc      6445 Jan  8 05:22 init_data.xml
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:22 start_atlas.sh
[2026-01-08 05:27:28] drwxrwx--x. 2 boinc boinc      4096 Jan  8 05:22 shared
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc    592397 Jan  8 05:22 input.tar.gz
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:22 boinc_lockfile
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc      2519 Jan  8 05:22 pandaJob.out
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc    989835 Jan  8 05:22 agis_schedconf.cvmfs.json
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc   1516240 Jan  8 05:22 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:27:28] drwx------. 5 boinc boinc      4096 Jan  8 05:22 pilot3
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc       523 Jan  8 05:24 boinc_task_state.xml
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc       967 Jan  8 05:24 memory_monitor_summary.json
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc     21948 Jan  8 05:24 log.47898826._019516.job.log.tgz.1
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc      8404 Jan  8 05:26 heartbeat.json
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc        22 Jan  8 05:27 wrapper_checkpoint.txt
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:27 boinc_mmap_file
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc        95 Jan  8 05:27 pilot_heartbeat.json
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc       822 Jan  8 05:27 pilotlog.txt
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc     90648 Jan  8 05:27 log.47898826._019516.job.log.1
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc       188 Jan  8 05:27 output.list
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:27 runtime_log
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc    133120 Jan  8 05:27 result.tar.gz
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc      8634 Jan  8 05:27 runtime_log.err
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc       647 Jan  8 05:27 57ZKDm0A0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzSeKDmfioKcm.diag
[2026-01-08 05:27:28] -rw-r--r--. 1 boinc boinc     21795 Jan  8 05:27 stderr.txt
[2026-01-08 05:27:28] No HITS result produced
[2026-01-08 05:27:28]  *** Contents of shared directory: ***
[2026-01-08 05:27:28] total 219824
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc 224347278 Jan  8 05:22 ATLAS.root_0
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:22 start_atlas.sh
[2026-01-08 05:27:28] -rw-r--r--. 2 boinc boinc    592397 Jan  8 05:22 input.tar.gz
[2026-01-08 05:27:28] -rw-------. 1 boinc boinc    133120 Jan  8 05:27 result.tar.gz
05:27:29 (140066): run_atlas exited; CPU time 27.327192
05:27:29 (140066): called boinc_finish(0)

</stderr_txt>
]]>

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