Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:42 (2186922): wrapper (7.7.26015): starting
10:31:42 (2186922): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 10:31:42] Arguments: --nthreads 9
[2026-01-08 10:31:42] Threads: 9
[2026-01-08 10:31:42] Checking for CVMFS
[2026-01-08 10:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 10:31:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 10:31:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 10:31:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 10:31:44] 2.13.3.0 4306 89075 349688 154912 1 265 19684147 32935936 26813 16776704 0 407140055 99.692 318553459 32576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 10:31:44] CVMFS is ok
[2026-01-08 10:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 10:31:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 10:31:44] Further information can be found at the LHC@home message board.
[2026-01-08 10:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 10:31:44] Checking for apptainer binary...
[2026-01-08 10:31:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 10:31:44] Running /usr/bin/apptainer --version
[2026-01-08 10:31:44] apptainer version 1.4.5-2.el9
[2026-01-08 10:31:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 10:31:44] c-6-4.aglt2.org
[2026-01-08 10:31:44] apptainer works
[2026-01-08 10:31:44] Set ATHENA_PROC_NUMBER=9
[2026-01-08 10:31:44] Set ATHENA_CORE_NUMBER=9
[2026-01-08 10:31:45] Starting ATLAS job with PandaID=6962918511
[2026-01-08 10:31:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:42:19]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:42:19] 2026-01-09 04:41:40,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:42:19] 2026-01-09 04:41:41,331 | INFO     | time since job start (47355s) is within the limit (174528.0s)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,007 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 23:42:19] 2026-01-09 04:41:42,060 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8019249999998
[2026-01-08 23:42:19] 2026-01-09 04:41:42,189 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962918511/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,190 | INFO     | extracted standard info from prmon json
[2026-01-08 23:42:19] 2026-01-09 04:41:42,190 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:42:19] 2026-01-09 04:41:42,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:42:19] 2026-01-09 04:41:42,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:42:19] 2026-01-09 04:41:42,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:42:19] 2026-01-09 04:41:42,320 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:42:19] 2026-01-09 04:41:42,348 | INFO     | sum of square deviations: 143774702353.86716
[2026-01-08 23:42:19] 2026-01-09 04:41:42,451 | INFO     | sum of deviations: -66777550827.922424
[2026-01-08 23:42:19] 2026-01-09 04:41:42,451 | INFO     | mean x: 1767910035.2467701
[2026-01-08 23:42:19] 2026-01-09 04:41:42,452 | INFO     | mean y: 2572293.031007752
[2026-01-08 23:42:19] 2026-01-09 04:41:42,452 | INFO     | intersect: 823695204.8163989
[2026-01-08 23:42:19] 2026-01-09 04:41:42,457 | INFO     | chi2: 4.0336376455643554
[2026-01-08 23:42:19] 2026-01-09 04:41:42,458 | INFO     | sum of square deviations: 141006389523.56055
[2026-01-08 23:42:19] 2026-01-09 04:41:42,593 | INFO     | sum of deviations: 34476119773.17681
[2026-01-08 23:42:19] 2026-01-09 04:41:42,598 | INFO     | mean x: 1767909882.7516255
[2026-01-08 23:42:19] 2026-01-09 04:41:42,598 | INFO     | mean y: 2577849.0585175552
[2026-01-08 23:42:19] 2026-01-09 04:41:42,598 | INFO     | intersect: -429676838.6323821
[2026-01-08 23:42:19] 2026-01-09 04:41:42,599 | INFO     | chi2: 2.650208273156131
[2026-01-08 23:42:19] 2026-01-09 04:41:42,600 | INFO     | current chi2=2.650208273156131 (change=34.29731408644332 %)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,601 | INFO     | sum of square deviations: 138273844805.7174
[2026-01-08 23:42:19] 2026-01-09 04:41:42,633 | INFO     | sum of deviations: 34274481902.225143
[2026-01-08 23:42:19] 2026-01-09 04:41:42,633 | INFO     | mean x: 1767909730.2565446
[2026-01-08 23:42:19] 2026-01-09 04:41:42,633 | INFO     | mean y: 2577837.804973822
[2026-01-08 23:42:19] 2026-01-09 04:41:42,633 | INFO     | intersect: -435640902.25815195
[2026-01-08 23:42:19] 2026-01-09 04:41:42,639 | INFO     | chi2: 2.6503009466992338
[2026-01-08 23:42:19] 2026-01-09 04:41:42,639 | INFO     | current chi2=2.6503009466992338 (change=-0.003496840004662771 %)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,639 | INFO     | right removable region: 763
[2026-01-08 23:42:19] 2026-01-09 04:41:42,640 | INFO     | sum of square deviations: 141006036943.5605
[2026-01-08 23:42:19] 2026-01-09 04:41:42,660 | INFO     | sum of deviations: -240626539964.7027
[2026-01-08 23:42:19] 2026-01-09 04:41:42,660 | INFO     | mean x: 1767910187.7516255
[2026-01-08 23:42:19] 2026-01-09 04:41:42,660 | INFO     | mean y: 2581852.5617685304
[2026-01-08 23:42:19] 2026-01-09 04:41:42,661 | INFO     | intersect: 3019517302.0510406
[2026-01-08 23:42:19] 2026-01-09 04:41:42,662 | INFO     | chi2: 1.9741146088706494
[2026-01-08 23:42:19] 2026-01-09 04:41:42,662 | INFO     | current chi2=1.9741146088706494 (change=51.05870228473519 %)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,663 | INFO     | sum of square deviations: 138273139645.71747
[2026-01-08 23:42:19] 2026-01-09 04:41:42,678 | INFO     | sum of deviations: -263622807025.76965
[2026-01-08 23:42:19] 2026-01-09 04:41:42,678 | INFO     | mean x: 1767910340.2565446
[2026-01-08 23:42:19] 2026-01-09 04:41:42,678 | INFO     | mean y: 2583132.2539267014
[2026-01-08 23:42:19] 2026-01-09 04:41:42,679 | INFO     | intersect: 3373168971.719592
[2026-01-08 23:42:19] 2026-01-09 04:41:42,680 | INFO     | chi2: 1.9172855881978061
[2026-01-08 23:42:19] 2026-01-09 04:41:42,680 | INFO     | current chi2=1.9172855881978061 (change=2.878709291622838 %)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,680 | INFO     | left removable region: 20
[2026-01-08 23:42:19] 2026-01-09 04:41:42,681 | INFO     | sum of square deviations: 127181682443.3566
[2026-01-08 23:42:19] 2026-01-09 04:41:42,703 | INFO     | sum of deviations: -107107612559.76726
[2026-01-08 23:42:19] 2026-01-09 04:41:42,705 | INFO     | mean x: 1767910309.7604306
[2026-01-08 23:42:19] 2026-01-09 04:41:42,705 | INFO     | mean y: 2585730.6473755045
[2026-01-08 23:42:19] 2026-01-09 04:41:42,706 | INFO     | intersect: 1491453064.8452294
[2026-01-08 23:42:19] 2026-01-09 04:41:42,707 | INFO     | chi2: 0.4312202311081224
[2026-01-08 23:42:19] 2026-01-09 04:41:42,707 | INFO     | current memory leak: -0.84 B/s (using 743 data points, chi2=0.43)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,708 | INFO     | could have reported an average CPU frequency of 2599 MHz (29 samples)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,708 | INFO     | ..............................
[2026-01-08 23:42:19] 2026-01-09 04:41:42,708 | INFO     | . Timing measurements:
[2026-01-08 23:42:19] 2026-01-09 04:41:42,708 | INFO     | . get job = 0 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,708 | INFO     | . initial setup = 4 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | . payload setup = 39 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | . stage-in = 0 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | . payload execution = 47209 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | . stage-out = 6 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | . log creation = 0 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,709 | INFO     | ..............................
[2026-01-08 23:42:19] 2026-01-09 04:41:42,866 | INFO     | 
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | job summary report
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | --------------------------------------------------
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | PanDA job id: 6962918511
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | task id: 47898826
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | errors: (none)
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | pilot state: finished 
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | transexitcode: 0
[2026-01-08 23:42:19] 2026-01-09 04:41:42,867 | INFO     | exeerrorcode: 0
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | exeerrordiag: 
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | exitcode: 0
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | exitmsg: OK
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | cpuconsumptiontime: 74424 s
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | nevents: 400
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | neventsw: 0
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | pid: 2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | pgrp: 2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | corecount: 9
[2026-01-08 23:42:19] 2026-01-09 04:41:42,868 | INFO     | event service: False
[2026-01-08 23:42:19] 2026-01-09 04:41:42,869 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 3: 2284025, 14: 2284053, 20: 2284343, 25: 2284499, 47253: 2329082, 47261: 2338080, 47263: 2338136, 47308: 2338330}
[2026-01-08 23:42:19] 2026-01-09 04:41:42,869 | INFO     | --------------------------------------------------
[2026-01-08 23:42:19] 2026-01-09 04:41:42,869 | INFO     | 
[2026-01-08 23:42:19] 2026-01-09 04:41:42,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 23:42:19] 2026-01-09 04:41:43,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:42:19] 2026-01-09 04:41:43,026 | INFO     | job 6962918511 has completed (purged errors)
[2026-01-08 23:42:19] 2026-01-09 04:41:43,027 | INFO     | overall cleanup function is called
[2026-01-08 23:42:19] 2026-01-09 04:41:44,070 | INFO     | --- collectZombieJob: --- 10, [2215382]
[2026-01-08 23:42:19] 2026-01-09 04:41:44,070 | INFO     | zombie collector waiting for pid 2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:44,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:42:19] 2026-01-09 04:41:44,070 | INFO     | collected zombie processes
[2026-01-08 23:42:19] 2026-01-09 04:41:44,070 | INFO     | will attempt to kill all subprocesses of pid=2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:46,644 | INFO     | process IDs to be killed: [2215382] (in reverse order)
[2026-01-08 23:42:19] 2026-01-09 04:41:47,099 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:42:19] 2026-01-09 04:41:47,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:42:19] 2026-01-09 04:41:47,116 | INFO     | did not find any defunct processes belonging to 2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:47,132 | INFO     | did not find any defunct processes belonging to 2215382
[2026-01-08 23:42:19] 2026-01-09 04:41:47,133 | INFO     | ready for new job
[2026-01-08 23:42:19] 2026-01-09 04:41:47,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:42:19] 2026-01-09 04:41:47,136 | INFO     | ***************************************
[2026-01-08 23:42:19] 2026-01-09 04:41:47,137 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:42:19] 2026-01-09 04:41:47,137 | INFO     | ***************************************
[2026-01-08 23:42:19] 2026-01-09 04:41:47,137 | INFO     | 
[2026-01-08 23:42:19] 2026-01-09 04:41:47,139 | INFO     | architecture information:
[2026-01-08 23:42:19] 2026-01-09 04:41:47,139 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:42:19] 2026-01-09 04:41:47,157 | INFO     | cat /etc/os-release:
[2026-01-08 23:42:19] NAME="CentOS Linux"
[2026-01-08 23:42:19] VERSION="7 (Core)"
[2026-01-08 23:42:19] ID="centos"
[2026-01-08 23:42:19] ID_LIKE="rhel fedora"
[2026-01-08 23:42:19] VERSION_ID="7"
[2026-01-08 23:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:42:19] ANSI_COLOR="0;31"
[2026-01-08 23:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:42:19] HOME_URL="https://www.centos.org/"
[2026-01-08 23:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:42:19] 
[2026-01-08 23:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:42:19] 
[2026-01-08 23:42:19] 2026-01-09 04:41:47,157 | INFO     | ***************************************
[2026-01-08 23:42:19] 2026-01-09 04:41:47,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 23:42:19] 2026-01-09 04:41:47,812 | INFO     | sufficient remaining disk space (75960942592 B)
[2026-01-08 23:42:19] 2026-01-09 04:41:47,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:42:19] 2026-01-09 04:41:47,813 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:42:19] 2026-01-09 04:41:47,813 | INFO     | update_server=False
[2026-01-08 23:42:19] 2026-01-09 04:41:47,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:42:19] 2026-01-09 04:41:47,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:42:19] 2026-01-09 04:41:47,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:42:19] 2026-01-09 04:41:47,839 | INFO     | aborting loop
[2026-01-08 23:42:19] 2026-01-09 04:41:47,893 | INFO     | all job control threads have been joined
[2026-01-08 23:42:19] 2026-01-09 04:41:47,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:42:19] 2026-01-09 04:41:48,430 | INFO     | all data control threads have been joined
[2026-01-08 23:42:19] 2026-01-09 04:41:48,564 | INFO     | all payload control threads have been joined
[2026-01-08 23:42:19] 2026-01-09 04:41:48,830 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:48,844 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:48,877 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:48,882 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:48,911 | INFO     | [job] control thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:48,980 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,053 | INFO     | [job] validate thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,200 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:42:19] 2026-01-09 04:41:49,368 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,438 | INFO     | [data] control thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,473 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,571 | INFO     | [payload] control thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:49,837 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:50,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:50,402 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:41:53,255 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:42:19] 2026-01-09 04:42:00,571 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:42:19] 2026-01-09 04:42:01,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579854927680)>', '<ExcThread(monitor, started 140579354691328)>']
[2026-01-08 23:42:19] 2026-01-09 04:42:06,471 | INFO     | all workflow threads have been joined
[2026-01-08 23:42:19] 2026-01-09 04:42:06,471 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:42:19] 2026-01-09 04:42:06,471 | INFO     | traces error code: 0
[2026-01-08 23:42:19] 2026-01-09 04:42:06,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:42:19] 2026-01-09 04:42:17,793 | INFO     | PID=2198052 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 23:42:19] 2026-01-09 04:42:17,794 | INFO     | .. there are 41 such processes running
[2026-01-08 23:42:19] 2026-01-09 04:42:17,794 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:42:19] 2026-01-09 04:42:17,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:42:19] 2026-01-09 04:42:17,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:42:19] 2026-01-09 04:42:17,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:42:19] 2026-01-09 04:42:17,795 | INFO     | [monitor] control thread has ended
[2026-01-08 23:42:19] 2026-01-09 04:42:18,173 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:42:19] 2026-01-09 04:42:18,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:42:19] 2026-01-09 04:42:18,194 [wrapper] pilotpid: 2198052
[2026-01-08 23:42:19] 2026-01-09 04:42:18,208 [wrapper] Pilot exit status: 0
[2026-01-08 23:42:19] 2026-01-09 04:42:18,263 [wrapper] pandaids: 6962918511
[2026-01-08 23:42:19] 2026-01-09 04:42:18,403 [wrapper] cleanup supervisor_pilot 2439430 2198053
[2026-01-08 23:42:19] 2026-01-09 04:42:18,420 [wrapper] Test setup, not cleaning
[2026-01-08 23:42:19] 2026-01-09 04:42:18,452 [wrapper] apfmon messages muted
[2026-01-08 23:42:19] 2026-01-09 04:42:18,468 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:42:19] 2026-01-09 04:42:18,504 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:42:19]  *** Error codes and diagnostics ***
[2026-01-08 23:42:19]     "exeErrorCode": 0,
[2026-01-08 23:42:19]     "exeErrorDiag": "",
[2026-01-08 23:42:19]     "pilotErrorCode": 0,
[2026-01-08 23:42:19]     "pilotErrorDiag": "",
[2026-01-08 23:42:19]  *** Listing of results directory ***
[2026-01-08 23:42:19] total 452936
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 23:42:19] -rwx------. 1 boincer umatlas     36322 Jan  8 03:04 runpilot2-wrapper.sh
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas       100 Jan  8 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:42:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 10:31 run_atlas
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas       105 Jan  8 10:31 job.xml
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas 226464975 Jan  8 10:31 EVNT.47898824._000798.pool.root.1
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 10:31 start_atlas.sh
[2026-01-08 23:42:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 10:31 shared
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas    592405 Jan  8 10:31 input.tar.gz
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas         0 Jan  8 10:31 boinc_lockfile
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 10:31 pandaJob.out
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas        57 Jan  8 10:31 setup.sh.local
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas    989843 Jan  8 10:32 agis_schedconf.cvmfs.json
[2026-01-08 23:42:19] drwx------. 5 boincer umatlas      4096 Jan  8 10:32 pilot3
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas 221715993 Jan  8 23:38 HITS.47898826._020559.pool.root.1
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas       531 Jan  8 23:38 boinc_task_state.xml
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas      6659 Jan  8 23:39 init_data.xml
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas      1051 Jan  8 23:40 memory_monitor_summary.json
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas   1516240 Jan  8 23:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas    820218 Jan  8 23:40 log.47898826._020559.job.log.tgz.1
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas        95 Jan  8 23:41 pilot_heartbeat.json
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas      7827 Jan  8 23:41 heartbeat.json
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 23:42 boinc_mmap_file
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas        28 Jan  8 23:42 wrapper_checkpoint.txt
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas       823 Jan  8 23:42 pilotlog.txt
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas   5035344 Jan  8 23:42 log.47898826._020559.job.log.1
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas       357 Jan  8 23:42 output.list
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas       620 Jan  8 23:42 runtime_log
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas   5877760 Jan  8 23:42 result.tar.gz
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas      9328 Jan  8 23:42 runtime_log.err
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas       656 Jan  8 23:42 CJgLDmZB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3XeKDmIh8Tym.diag
[2026-01-08 23:42:19] -rw-r--r--. 1 boincer umatlas     21247 Jan  8 23:42 stderr.txt
[2026-01-08 23:42:19] HITS file was successfully produced:
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas 221715993 Jan  8 23:38 shared/HITS.pool.root.1
[2026-01-08 23:42:19]  *** Contents of shared directory: ***
[2026-01-08 23:42:19] total 444020
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas 226464975 Jan  8 10:31 ATLAS.root_0
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 10:31 start_atlas.sh
[2026-01-08 23:42:19] -rw-r--r--. 2 boincer umatlas    592405 Jan  8 10:31 input.tar.gz
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas 221715993 Jan  8 23:38 HITS.pool.root.1
[2026-01-08 23:42:19] -rw-------. 1 boincer umatlas   5877760 Jan  8 23:42 result.tar.gz
23:42:20 (2186922): run_atlas exited; CPU time 76491.640872
23:42:20 (2186922): called boinc_finish(0)

</stderr_txt>
]]>

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