Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
15:15:20 (2843639): wrapper (7.7.26015): starting
15:15:20 (2843639): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 15:15:20] Arguments: --nthreads 12
[2026-01-08 15:15:20] Threads: 12
[2026-01-08 15:15:20] Checking for CVMFS
[2026-01-08 15:15:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:15:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:15:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:15:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:15:20] 2.13.0.0 2697806 368 72156 154909 1 57 5028357 6144001 0 130560 0 428619 99.993 20506 808 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 15:15:20] CVMFS is ok
[2026-01-08 15:15:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:15:20] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 15:15:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 15:15:20] Further information can be found at the LHC@home message board.
[2026-01-08 15:15:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:15:20] Checking for apptainer binary...
[2026-01-08 15:15:20] apptainer is not installed, using version from CVMFS
[2026-01-08 15:15:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:15:20] Debian-bookworm-latest-amd64-base
[2026-01-08 15:15:20] apptainer works
[2026-01-08 15:15:20] Set ATHENA_PROC_NUMBER=12
[2026-01-08 15:15:20] Set ATHENA_CORE_NUMBER=12
[2026-01-08 15:15:20] Starting ATLAS job with PandaID=6962917825
[2026-01-08 15:15:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:15:36]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:15:36]  scope=mc23_13p6TeV
[2026-01-08 16:15:36]  status=None
[2026-01-08 16:15:36]  status_code=0
[2026-01-08 16:15:36]  storage_token=
[2026-01-08 16:15:36]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6962917825/log.47898826._019905.job.log.tgz.1
[2026-01-08 16:15:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/11/log.47898826._019905.job.log.tgz.1
[2026-01-08 16:15:36]  workdir=None
[2026-01-08 16:15:36] ]
[2026-01-08 16:15:36] 2026-01-08 15:14:43,787 | INFO     | transferring file log.47898826._019905.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6962917825/log.47898826._019905.job.log.tgz.1 to /var/lib/boinc
[2026-01-08 16:15:36] 2026-01-08 15:14:43,787 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6962917825/log.47898826._019905.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.478988
[2026-01-08 16:15:36] 2026-01-08 15:14:43,814 | INFO     | adding to output.list: log.47898826._019905.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/11/log.47898826._019905.job.log.tg
[2026-01-08 16:15:36] 2026-01-08 15:14:43,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 16:15:36] 2026-01-08 15:14:43,814 | INFO     | summary of transferred files:
[2026-01-08 16:15:36] 2026-01-08 15:14:43,814 | INFO     |  -- lfn=log.47898826._019905.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 16:15:36] 2026-01-08 15:14:43,815 | INFO     | stage-out finished correctly
[2026-01-08 16:15:36] 2026-01-08 15:14:43,854 | INFO     | time since job start (3557s) is within the limit (174528.0s)
[2026-01-08 16:15:36] 2026-01-08 15:14:43,859 | WARNING  | process 2854283 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 16:15:36] 2026-01-08 15:14:43,859 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6962917825/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:15:36] 2026-01-08 15:14:43,903 | INFO     | number of running child processes to parent process 2854283: 1
[2026-01-08 16:15:36] 2026-01-08 15:14:43,903 | INFO     | maximum number of monitored processes: 6
[2026-01-08 16:15:36] 2026-01-08 15:14:44,582 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 16:15:36] 2026-01-08 15:14:44,951 | INFO     | job 6962917825 has state=finished
[2026-01-08 16:15:36] 2026-01-08 15:14:44,951 | INFO     | preparing for final server update for job 6962917825 in state='finished'
[2026-01-08 16:15:36] 2026-01-08 15:14:44,951 | INFO     | this job has now completed (state=finished)
[2026-01-08 16:15:36] 2026-01-08 15:14:44,952 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 16:15:36] 2026-01-08 15:14:44,952 | INFO     | log transfer has been attempted: DONE
[2026-01-08 16:15:36] 2026-01-08 15:14:44,952 | INFO     | job 6962917825 has finished - writing final server update
[2026-01-08 16:15:36] 2026-01-08 15:14:44,952 | INFO     | total number of processed events: 400 (read)
[2026-01-08 16:15:36] 2026-01-08 15:14:44,953 | INFO     | executing command: lscpu
[2026-01-08 16:15:36] 2026-01-08 15:14:44,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 16:15:36] 2026-01-08 15:14:45,860 | INFO     | time since job start (3559s) is within the limit (174528.0s)
[2026-01-08 16:15:36] 2026-01-08 15:14:46,406 | INFO     | monitor loop #264: job 0:6962917825 is in state 'finished'
[2026-01-08 16:15:36] 2026-01-08 15:14:46,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:15:36] 2026-01-08 15:14:46,908 | INFO     | PID=2847472 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:15:36] 2026-01-08 15:14:47,908 | INFO     | time since job start (3561s) is within the limit (174528.0s)
[2026-01-08 16:15:36] 2026-01-08 15:14:48,909 | INFO     | monitor loop #265: job 0:6962917825 is in state 'finished'
[2026-01-08 16:15:36] 2026-01-08 15:14:48,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:15:36] 2026-01-08 15:14:49,910 | INFO     | time since job start (3563s) is within the limit (174528.0s)
[2026-01-08 16:15:36] 2026-01-08 15:14:50,564 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 16:15:36] 2026-01-08 15:14:50,566 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3796.4771874999997
[2026-01-08 16:15:36] 2026-01-08 15:14:50,567 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6962917825/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:15:36] 2026-01-08 15:14:50,567 | INFO     | extracted standard info from prmon json
[2026-01-08 16:15:36] 2026-01-08 15:14:50,567 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:15:36] 2026-01-08 15:14:50,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:15:36] 2026-01-08 15:14:50,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:15:36] 2026-01-08 15:14:50,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:15:36] 2026-01-08 15:14:50,568 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:15:36] 2026-01-08 15:14:50,568 | INFO     | sum of square deviations: 41117050.0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,568 | INFO     | sum of deviations: 9589261.0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | mean x: 1767883575.0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | mean y: 2902324.0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | intersect: -409401015.3273125
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | chi2: 0.006915251027296824
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | current memory leak: 0.23 B/s (using 51 data points, chi2=0.01)
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | could have reported an average CPU frequency of 3938 MHz (5 samples)
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | ..............................
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . Timing measurements:
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . get job = 0 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . initial setup = 1 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . payload setup = 2 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . stage-in = 0 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . payload execution = 3537 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . stage-out = 0 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | . log creation = 0 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,569 | INFO     | ..............................
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | 
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | job summary report
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | --------------------------------------------------
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | PanDA job id: 6962917825
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | task id: 47898826
[2026-01-08 16:15:36] 2026-01-08 15:14:50,992 | INFO     | errors: (none)
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | pilot state: finished 
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | transexitcode: 0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | exeerrorcode: 0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | exeerrordiag: 
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | exitcode: 0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | exitmsg: OK
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | cpuconsumptiontime: 38682 s
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | nevents: 400
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | neventsw: 0
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | pid: 2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | pgrp: 2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | corecount: 12
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | event service: False
[2026-01-08 16:15:36] 2026-01-08 15:14:50,993 | INFO     | sizes: {0: 2283976, 2: 2284238, 11: 2284266, 3543: 2310002, 3544: 2319069, 3545: 2319069, 3551: 2319423}
[2026-01-08 16:15:36] 2026-01-08 15:14:50,994 | INFO     | --------------------------------------------------
[2026-01-08 16:15:36] 2026-01-08 15:14:50,994 | INFO     | 
[2026-01-08 16:15:36] 2026-01-08 15:14:50,994 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-08 16:15:36] 2026-01-08 15:14:51,009 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:15:36] 2026-01-08 15:14:51,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:15:36] 2026-01-08 15:14:51,011 | INFO     | job 6962917825 has completed (purged errors)
[2026-01-08 16:15:36] 2026-01-08 15:14:51,011 | INFO     | overall cleanup function is called
[2026-01-08 16:15:36] 2026-01-08 15:14:52,019 | INFO     | --- collectZombieJob: --- 10, [2854283]
[2026-01-08 16:15:36] 2026-01-08 15:14:52,019 | INFO     | zombie collector waiting for pid 2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:52,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:15:36] 2026-01-08 15:14:52,019 | INFO     | collected zombie processes
[2026-01-08 16:15:36] 2026-01-08 15:14:52,019 | INFO     | will attempt to kill all subprocesses of pid=2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:52,084 | INFO     | process IDs to be killed: [2854283] (in reverse order)
[2026-01-08 16:15:36] 2026-01-08 15:14:52,115 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:15:36] 2026-01-08 15:14:52,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:15:36] 2026-01-08 15:14:52,116 | INFO     | did not find any defunct processes belonging to 2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:52,117 | INFO     | did not find any defunct processes belonging to 2854283
[2026-01-08 16:15:36] 2026-01-08 15:14:52,117 | INFO     | ready for new job
[2026-01-08 16:15:36] 2026-01-08 15:14:52,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:15:36] 2026-01-08 15:14:52,118 | INFO     | ***************************************
[2026-01-08 16:15:36] 2026-01-08 15:14:52,118 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:15:36] 2026-01-08 15:14:52,118 | INFO     | ***************************************
[2026-01-08 16:15:36] 2026-01-08 15:14:52,118 | INFO     | 
[2026-01-08 16:15:36] 2026-01-08 15:14:52,119 | INFO     | architecture information:
[2026-01-08 16:15:36] 2026-01-08 15:14:52,119 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:15:36] 2026-01-08 15:14:52,129 | INFO     | cat /etc/os-release:
[2026-01-08 16:15:36] NAME="CentOS Linux"
[2026-01-08 16:15:36] VERSION="7 (Core)"
[2026-01-08 16:15:36] ID="centos"
[2026-01-08 16:15:36] ID_LIKE="rhel fedora"
[2026-01-08 16:15:36] VERSION_ID="7"
[2026-01-08 16:15:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:15:36] ANSI_COLOR="0;31"
[2026-01-08 16:15:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:15:36] HOME_URL="https://www.centos.org/"
[2026-01-08 16:15:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:15:36] 
[2026-01-08 16:15:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:15:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:15:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:15:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:15:36] 
[2026-01-08 16:15:36] 2026-01-08 15:14:52,130 | INFO     | ***************************************
[2026-01-08 16:15:36] 2026-01-08 15:14:52,632 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-08 16:15:36] 2026-01-08 15:14:52,647 | INFO     | sufficient remaining disk space (710897827840 B)
[2026-01-08 16:15:36] 2026-01-08 15:14:52,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:15:36] 2026-01-08 15:14:52,647 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:15:36] 2026-01-08 15:14:52,647 | INFO     | update_server=False
[2026-01-08 16:15:36] 2026-01-08 15:14:52,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:15:36] 2026-01-08 15:14:52,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:15:36] 2026-01-08 15:14:52,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:15:36] 2026-01-08 15:14:52,648 | INFO     | aborting loop
[2026-01-08 16:15:36] 2026-01-08 15:14:53,132 | INFO     | all data control threads have been joined
[2026-01-08 16:15:36] 2026-01-08 15:14:53,650 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:53,653 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:53,657 | INFO     | all payload control threads have been joined
[2026-01-08 16:15:36] 2026-01-08 15:14:54,013 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,134 | INFO     | [data] control thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,297 | INFO     | all job control threads have been joined
[2026-01-08 16:15:36] 2026-01-08 15:14:54,494 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,653 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,663 | INFO     | [payload] control thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,673 | INFO     | [job] validate thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,718 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,894 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:54,907 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:55,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:55,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:15:36] 2026-01-08 15:14:55,202 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:55,303 | INFO     | [job] control thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:55,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:15:36] 2026-01-08 15:14:56,629 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:14:59,166 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:15:36] 2026-01-08 15:15:23,099 | INFO     | PID=2847472 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:15:36] 2026-01-08 15:15:23,111 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:15:36] 2026-01-08 15:15:23,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:15:36] 2026-01-08 15:15:23,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:15:36] 2026-01-08 15:15:25,109 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-08 16:15:36] 2026-01-08 15:15:31,617 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:15:36] 2026-01-08 15:15:31,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518206674752)>', '<ExcThread(monitor, started 140517815863040)>']
[2026-01-08 16:15:36] 2026-01-08 15:15:32,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:15:36] 2026-01-08 15:15:32,145 | INFO     | [monitor] control thread has ended
[2026-01-08 16:15:36] 2026-01-08 15:15:36,724 | INFO     | all workflow threads have been joined
[2026-01-08 16:15:36] 2026-01-08 15:15:36,735 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:15:36] 2026-01-08 15:15:36,736 | INFO     | traces error code: 0
[2026-01-08 16:15:36] 2026-01-08 15:15:36,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:15:36] 2026-01-08 15:15:36,809 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:15:36] 2026-01-08 15:15:36,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:15:36] 2026-01-08 15:15:36,812 [wrapper] pilotpid: 2847472
[2026-01-08 16:15:36] 2026-01-08 15:15:36,813 [wrapper] Pilot exit status: 0
[2026-01-08 16:15:36] 2026-01-08 15:15:36,819 [wrapper] pandaids: 6962917825
[2026-01-08 16:15:36] 2026-01-08 15:15:36,834 [wrapper] cleanup supervisor_pilot 2867295 2847473
[2026-01-08 16:15:36] 2026-01-08 15:15:36,835 [wrapper] Test setup, not cleaning
[2026-01-08 16:15:36] 2026-01-08 15:15:36,837 [wrapper] apfmon messages muted
[2026-01-08 16:15:36] 2026-01-08 15:15:36,838 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:15:36] 2026-01-08 15:15:36,839 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:15:36]  *** Error codes and diagnostics ***
[2026-01-08 16:15:36]     "exeErrorCode": 0,
[2026-01-08 16:15:36]     "exeErrorDiag": "",
[2026-01-08 16:15:36]     "pilotErrorCode": 0,
[2026-01-08 16:15:36]     "pilotErrorDiag": "",
[2026-01-08 16:15:36]  *** Listing of results directory ***
[2026-01-08 16:15:36] total 439436
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 16:15:36] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc       100 Jan  8 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:15:36] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 15:15 run_atlas
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc       105 Jan  8 15:15 job.xml
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc      6726 Jan  8 15:15 init_data.xml
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc 224014914 Jan  8 15:15 EVNT.47898824._000659.pool.root.1
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc     15847 Jan  8 15:15 start_atlas.sh
[2026-01-08 16:15:36] drwxrwx--x 2 boinc boinc      4096 Jan  8 15:15 shared
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc    592402 Jan  8 15:15 input.tar.gz
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc         0 Jan  8 15:15 boinc_lockfile
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc      2519 Jan  8 15:15 pandaJob.out
[2026-01-08 16:15:36] -rw------- 1 boinc boinc    989835 Jan  8 15:15 agis_schedconf.cvmfs.json
[2026-01-08 16:15:36] -rw------- 1 boinc boinc   1516240 Jan  8 15:15 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:15:36] drwx------ 5 boinc boinc      4096 Jan  8 15:15 pilot3
[2026-01-08 16:15:36] -rw------- 1 boinc boinc 220269267 Jan  8 16:14 HITS.47898826._019905.pool.root.1
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc       529 Jan  8 16:14 boinc_task_state.xml
[2026-01-08 16:15:36] -rw------- 1 boinc boinc      1011 Jan  8 16:14 memory_monitor_summary.json
[2026-01-08 16:15:36] -rw------- 1 boinc boinc    358727 Jan  8 16:14 log.47898826._019905.job.log.tgz.1
[2026-01-08 16:15:36] -rw------- 1 boinc boinc      7768 Jan  8 16:14 heartbeat.json
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc        27 Jan  8 16:15 wrapper_checkpoint.txt
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc      8192 Jan  8 16:15 boinc_mmap_file
[2026-01-08 16:15:36] -rw------- 1 boinc boinc        95 Jan  8 16:15 pilot_heartbeat.json
[2026-01-08 16:15:36] -rw------- 1 boinc boinc      4756 Jan  8 16:15 pilotlog.txt
[2026-01-08 16:15:36] -rw------- 1 boinc boinc    529011 Jan  8 16:15 log.47898826._019905.job.log.1
[2026-01-08 16:15:36] -rw------- 1 boinc boinc       357 Jan  8 16:15 output.list
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc       620 Jan  8 16:15 runtime_log
[2026-01-08 16:15:36] -rw------- 1 boinc boinc    911360 Jan  8 16:15 result.tar.gz
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc      9132 Jan  8 16:15 runtime_log.err
[2026-01-08 16:15:36] -rw------- 1 boinc boinc       707 Jan  8 16:15 P6JNDmBB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbUeKDmnrp1vm.diag
[2026-01-08 16:15:36] -rw-r--r-- 1 boinc boinc     22234 Jan  8 16:15 stderr.txt
[2026-01-08 16:15:36] HITS file was successfully produced:
[2026-01-08 16:15:36] -rw------- 1 boinc boinc 220269267 Jan  8 16:14 shared/HITS.pool.root.1
[2026-01-08 16:15:36]  *** Contents of shared directory: ***
[2026-01-08 16:15:36] total 435372
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc 224014914 Jan  8 15:15 ATLAS.root_0
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc     15847 Jan  8 15:15 start_atlas.sh
[2026-01-08 16:15:36] -rw-r--r-- 2 boinc boinc    592402 Jan  8 15:15 input.tar.gz
[2026-01-08 16:15:36] -rw------- 1 boinc boinc 220269267 Jan  8 16:14 HITS.pool.root.1
[2026-01-08 16:15:36] -rw------- 1 boinc boinc    911360 Jan  8 16:15 result.tar.gz
16:15:38 (2843639): run_atlas exited; CPU time 38702.580026
16:15:38 (2843639): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN