Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:16:52 (12319): wrapper (7.7.26015): starting
08:16:52 (12319): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 08:16:52] Arguments: --nthreads 8
[2026-01-08 08:16:52] Threads: 8
[2026-01-08 08:16:52] Checking for CVMFS
[2026-01-08 08:16:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:16:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:16:53] 2.11.2.0 2776 105047 87116 154909 2 56 10639262 20275200 1 130560 0 21294823 99.809 6293590 31232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 08:16:53] CVMFS is ok
[2026-01-08 08:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:16:53] Further information can be found at the LHC@home message board.
[2026-01-08 08:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:16:53] Checking for apptainer binary...
[2026-01-08 08:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:16:53] Running /usr/bin/apptainer --version
[2026-01-08 08:16:53] apptainer version 1.3.2-1.el7
[2026-01-08 08:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:16:54] c-115-7.aglt2.org
[2026-01-08 08:16:54] apptainer works
[2026-01-08 08:16:54] Set ATHENA_PROC_NUMBER=8
[2026-01-08 08:16:54] Set ATHENA_CORE_NUMBER=8
[2026-01-08 08:16:55] Starting ATLAS job with PandaID=6962917251
[2026-01-08 08:16:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 10:54:54]  *** The last 200 lines of the pilot log: ***
[2026-01-08 10:54:54] 2026-01-08 15:54:16,983 | INFO     | job 6962917251 has finished - writing final server update
[2026-01-08 10:54:54] 2026-01-08 15:54:16,983 | INFO     | total number of processed events: 400 (read)
[2026-01-08 10:54:54] 2026-01-08 15:54:16,984 | INFO     | executing command: lscpu
[2026-01-08 10:54:54] 2026-01-08 15:54:17,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 10:54:54] 2026-01-08 15:54:18,311 | INFO     | monitor loop #693: job 0:6962917251 is in state 'finished'
[2026-01-08 10:54:54] 2026-01-08 15:54:18,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 10:54:54] 2026-01-08 15:54:18,799 | INFO     | time since job start (9427s) is within the limit (174528.0s)
[2026-01-08 10:54:54] 2026-01-08 15:54:20,805 | INFO     | time since job start (9429s) is within the limit (174528.0s)
[2026-01-08 10:54:54] 2026-01-08 15:54:20,814 | INFO     | monitor loop #694: job 0:6962917251 is in state 'finished'
[2026-01-08 10:54:54] 2026-01-08 15:54:20,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,499 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 10:54:54] 2026-01-08 15:54:22,503 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-08 10:54:54] 2026-01-08 15:54:22,505 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962917251/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,506 | INFO     | extracted standard info from prmon json
[2026-01-08 10:54:54] 2026-01-08 15:54:22,506 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 10:54:54] 2026-01-08 15:54:22,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 10:54:54] 2026-01-08 15:54:22,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 10:54:54] 2026-01-08 15:54:22,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 10:54:54] 2026-01-08 15:54:22,511 | INFO     | fitting pss+swap vs Time
[2026-01-08 10:54:54] 2026-01-08 15:54:22,511 | INFO     | sum of square deviations: 1132458442.5
[2026-01-08 10:54:54] 2026-01-08 15:54:22,512 | INFO     | sum of deviations: -18325329823.000004
[2026-01-08 10:54:54] 2026-01-08 15:54:22,512 | INFO     | mean x: 1767882928.5
[2026-01-08 10:54:54] 2026-01-08 15:54:22,512 | INFO     | mean y: 2590235.1948051946
[2026-01-08 10:54:54] 2026-01-08 15:54:22,513 | INFO     | intersect: 28610295858.099934
[2026-01-08 10:54:54] 2026-01-08 15:54:22,513 | INFO     | chi2: 1.6089176376237913
[2026-01-08 10:54:54] 2026-01-08 15:54:22,513 | INFO     | sum of square deviations: 1025693650.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,514 | INFO     | sum of deviations: -16829961366.000008
[2026-01-08 10:54:54] 2026-01-08 15:54:22,514 | INFO     | mean x: 1767882776.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,514 | INFO     | mean y: 2592371.9194630873
[2026-01-08 10:54:54] 2026-01-08 15:54:22,514 | INFO     | intersect: 29010667853.031048
[2026-01-08 10:54:54] 2026-01-08 15:54:22,515 | INFO     | chi2: 1.6080758304163323
[2026-01-08 10:54:54] 2026-01-08 15:54:22,515 | INFO     | current chi2=1.6080758304163323 (change=0.0523213362681654 %)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,515 | INFO     | right removable region: 148
[2026-01-08 10:54:54] 2026-01-08 15:54:22,515 | INFO     | sum of square deviations: 1025693650.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,516 | INFO     | sum of deviations: -41474047619.999985
[2026-01-08 10:54:54] 2026-01-08 15:54:22,516 | INFO     | mean x: 1767883081.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,516 | INFO     | mean y: 2622807.966442953
[2026-01-08 10:54:54] 2026-01-08 15:54:22,517 | INFO     | intersect: 71487190434.94385
[2026-01-08 10:54:54] 2026-01-08 15:54:22,517 | INFO     | chi2: 0.1596584724674593
[2026-01-08 10:54:54] 2026-01-08 15:54:22,517 | INFO     | current chi2=0.1596584724674593 (change=90.07665347598162 %)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,517 | INFO     | sum of square deviations: 925859220.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,518 | INFO     | sum of deviations: -40513571327.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,518 | INFO     | mean x: 1767883233.5
[2026-01-08 10:54:54] 2026-01-08 15:54:22,518 | INFO     | mean y: 2621278.9305555555
[2026-01-08 10:54:54] 2026-01-08 15:54:22,518 | INFO     | intersect: 77361318941.63747
[2026-01-08 10:54:54] 2026-01-08 15:54:22,519 | INFO     | chi2: 0.13758321575755517
[2026-01-08 10:54:54] 2026-01-08 15:54:22,519 | INFO     | current chi2=0.13758321575755517 (change=13.826548863170027 %)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,519 | INFO     | left removable region: 20
[2026-01-08 10:54:54] 2026-01-08 15:54:22,519 | INFO     | sum of square deviations: 650252192.0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,520 | INFO     | sum of deviations: -31465425558.5
[2026-01-08 10:54:54] 2026-01-08 15:54:22,520 | INFO     | mean x: 1767883355.5
[2026-01-08 10:54:54] 2026-01-08 15:54:22,520 | INFO     | mean y: 2613185.2421875
[2026-01-08 10:54:54] 2026-01-08 15:54:22,520 | INFO     | intersect: 85549732907.36446
[2026-01-08 10:54:54] 2026-01-08 15:54:22,520 | INFO     | chi2: 0.12762501062981646
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | current memory leak: -48.39 B/s (using 128 data points, chi2=0.13)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | could have reported an average CPU frequency of 2180 MHz (9 samples)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | ..............................
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | . Timing measurements:
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | . get job = 0 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | . initial setup = 2 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,521 | INFO     | . payload setup = 7 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,522 | INFO     | . stage-in = 0 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,522 | INFO     | . payload execution = 9394 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,522 | INFO     | . stage-out = 0 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,522 | INFO     | . log creation = 0 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,522 | INFO     | ..............................
[2026-01-08 10:54:54] 2026-01-08 15:54:22,604 | INFO     | 
[2026-01-08 10:54:54] 2026-01-08 15:54:22,604 | INFO     | job summary report
[2026-01-08 10:54:54] 2026-01-08 15:54:22,604 | INFO     | --------------------------------------------------
[2026-01-08 10:54:54] 2026-01-08 15:54:22,605 | INFO     | PanDA job id: 6962917251
[2026-01-08 10:54:54] 2026-01-08 15:54:22,605 | INFO     | task id: 47898826
[2026-01-08 10:54:54] 2026-01-08 15:54:22,605 | INFO     | errors: (none)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 10:54:54] 2026-01-08 15:54:22,605 | INFO     | pilot state: finished 
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | transexitcode: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | exeerrorcode: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | exeerrordiag: 
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | exitcode: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | exitmsg: OK
[2026-01-08 10:54:54] 2026-01-08 15:54:22,606 | INFO     | cpuconsumptiontime: 71137 s
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | nevents: 400
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | neventsw: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | pid: 22519
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | pgrp: 22519
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | corecount: 8
[2026-01-08 10:54:54] 2026-01-08 15:54:22,607 | INFO     | event service: False
[2026-01-08 10:54:54] 2026-01-08 15:54:22,608 | INFO     | sizes: {0: 2283967, 6: 2284229, 11: 2284257, 9407: 2312619, 9409: 2321673, 9415: 2321875}
[2026-01-08 10:54:54] 2026-01-08 15:54:22,608 | INFO     | --------------------------------------------------
[2026-01-08 10:54:54] 2026-01-08 15:54:22,608 | INFO     | 
[2026-01-08 10:54:54] 2026-01-08 15:54:22,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 10:54:54] 2026-01-08 15:54:22,637 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,638 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,638 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 10:54:54] 2026-01-08 15:54:22,641 | INFO     | job 6962917251 has completed (purged errors)
[2026-01-08 10:54:54] 2026-01-08 15:54:22,641 | INFO     | overall cleanup function is called
[2026-01-08 10:54:54] 2026-01-08 15:54:23,649 | INFO     | --- collectZombieJob: --- 10, [22519]
[2026-01-08 10:54:54] 2026-01-08 15:54:23,650 | INFO     | zombie collector waiting for pid 22519
[2026-01-08 10:54:54] 2026-01-08 15:54:23,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 10:54:54] 2026-01-08 15:54:23,650 | INFO     | collected zombie processes
[2026-01-08 10:54:54] 2026-01-08 15:54:23,650 | INFO     | will attempt to kill all subprocesses of pid=22519
[2026-01-08 10:54:54] 2026-01-08 15:54:23,736 | INFO     | process IDs to be killed: [22519] (in reverse order)
[2026-01-08 10:54:54] 2026-01-08 15:54:23,796 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 10:54:54] 2026-01-08 15:54:23,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 10:54:54] 2026-01-08 15:54:23,800 | INFO     | did not find any defunct processes belonging to 22519
[2026-01-08 10:54:54] 2026-01-08 15:54:23,803 | INFO     | did not find any defunct processes belonging to 22519
[2026-01-08 10:54:54] 2026-01-08 15:54:23,803 | INFO     | ready for new job
[2026-01-08 10:54:54] 2026-01-08 15:54:23,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 10:54:54] 2026-01-08 15:54:23,804 | INFO     | ***************************************
[2026-01-08 10:54:54] 2026-01-08 15:54:23,805 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 10:54:54] 2026-01-08 15:54:23,805 | INFO     | ***************************************
[2026-01-08 10:54:54] 2026-01-08 15:54:23,805 | INFO     | 
[2026-01-08 10:54:54] 2026-01-08 15:54:23,805 | INFO     | architecture information:
[2026-01-08 10:54:54] 2026-01-08 15:54:23,806 | INFO     | executing command: cat /etc/os-release
[2026-01-08 10:54:54] 2026-01-08 15:54:23,824 | INFO     | cat /etc/os-release:
[2026-01-08 10:54:54] NAME="CentOS Linux"
[2026-01-08 10:54:54] VERSION="7 (Core)"
[2026-01-08 10:54:54] ID="centos"
[2026-01-08 10:54:54] ID_LIKE="rhel fedora"
[2026-01-08 10:54:54] VERSION_ID="7"
[2026-01-08 10:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 10:54:54] ANSI_COLOR="0;31"
[2026-01-08 10:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 10:54:54] HOME_URL="https://www.centos.org/"
[2026-01-08 10:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 10:54:54] 
[2026-01-08 10:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 10:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 10:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 10:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 10:54:54] 
[2026-01-08 10:54:54] 2026-01-08 15:54:23,824 | INFO     | ***************************************
[2026-01-08 10:54:54] 2026-01-08 15:54:24,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 10:54:54] 2026-01-08 15:54:24,347 | INFO     | sufficient remaining disk space (18532532224 B)
[2026-01-08 10:54:54] 2026-01-08 15:54:24,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 10:54:54] 2026-01-08 15:54:24,348 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 10:54:54] 2026-01-08 15:54:24,348 | INFO     | update_server=False
[2026-01-08 10:54:54] 2026-01-08 15:54:24,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 10:54:54] 2026-01-08 15:54:24,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:54:54] 2026-01-08 15:54:24,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:54:54] 2026-01-08 15:54:24,350 | INFO     | aborting loop
[2026-01-08 10:54:54] 2026-01-08 15:54:24,686 | INFO     | all data control threads have been joined
[2026-01-08 10:54:54] 2026-01-08 15:54:24,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 10:54:54] 2026-01-08 15:54:25,028 | INFO     | all job control threads have been joined
[2026-01-08 10:54:54] 2026-01-08 15:54:25,352 | INFO     | [job] job monitor thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,354 | INFO     | [job] retrieve thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,355 | INFO     | [job] queue monitor thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,466 | INFO     | [payload] validate_post thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,499 | INFO     | [data] copytool_in thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,637 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,639 | INFO     | [job] validate thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,640 | INFO     | all payload control threads have been joined
[2026-01-08 10:54:54] 2026-01-08 15:54:25,648 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,690 | INFO     | [data] control thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:25,959 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:26,034 | INFO     | [job] control thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:26,130 | INFO     | [monitor] cgroup control has ended
[2026-01-08 10:54:54] 2026-01-08 15:54:26,469 | INFO     | [payload] failed_post thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:26,645 | INFO     | [payload] control thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:26,697 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:26,924 | INFO     | [data] copytool_out thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:27,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 10:54:54] 2026-01-08 15:54:31,497 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 10:54:54] 2026-01-08 15:54:33,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764744972096)>', '<ExcThread(monitor, started 139763889706752)>']
[2026-01-08 10:54:54] 2026-01-08 15:54:38,223 | INFO     | all workflow threads have been joined
[2026-01-08 10:54:54] 2026-01-08 15:54:38,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 10:54:54] 2026-01-08 15:54:38,224 | INFO     | traces error code: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:38,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 10:54:54] 2026-01-08 15:54:54,017 | INFO     | PID=16069 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 10:54:54] 2026-01-08 15:54:54,017 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 10:54:54] 2026-01-08 15:54:54,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 10:54:54] 2026-01-08 15:54:54,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 10:54:54] 2026-01-08 15:54:54,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 10:54:54] 2026-01-08 15:54:54,018 | INFO     | [monitor] control thread has ended
[2026-01-08 10:54:54] 2026-01-08 15:54:54,125 [wrapper] ==== pilot stdout END ====
[2026-01-08 10:54:54] 2026-01-08 15:54:54,130 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 10:54:54] 2026-01-08 15:54:54,134 [wrapper] pilotpid: 16069
[2026-01-08 10:54:54] 2026-01-08 15:54:54,139 [wrapper] Pilot exit status: 0
[2026-01-08 10:54:54] 2026-01-08 15:54:54,156 [wrapper] pandaids: 6962917251
[2026-01-08 10:54:54] 2026-01-08 15:54:54,200 [wrapper] cleanup supervisor_pilot 28977 16070
[2026-01-08 10:54:54] 2026-01-08 15:54:54,205 [wrapper] Test setup, not cleaning
[2026-01-08 10:54:54] 2026-01-08 15:54:54,210 [wrapper] apfmon messages muted
[2026-01-08 10:54:54] 2026-01-08 15:54:54,214 [wrapper] ==== wrapper stdout END ====
[2026-01-08 10:54:54] 2026-01-08 15:54:54,219 [wrapper] ==== wrapper stderr END ====
[2026-01-08 10:54:54]  *** Error codes and diagnostics ***
[2026-01-08 10:54:54]     "exeErrorCode": 0,
[2026-01-08 10:54:54]     "exeErrorDiag": "",
[2026-01-08 10:54:54]     "pilotErrorCode": 0,
[2026-01-08 10:54:54]     "pilotErrorDiag": "",
[2026-01-08 10:54:54]  *** Listing of results directory ***
[2026-01-08 10:54:54] total 442056
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 10:54:54] -rwx------ 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas       100 Jan  8 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 10:54:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 08:16 run_atlas
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas       105 Jan  8 08:16 job.xml
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas 225523751 Jan  8 08:16 EVNT.47898824._000641.pool.root.1
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:16 start_atlas.sh
[2026-01-08 10:54:54] drwxrwx--x 2 boincer umatlas      4096 Jan  8 08:16 shared
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 08:16 input.tar.gz
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas         0 Jan  8 08:16 boinc_lockfile
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 08:16 pandaJob.out
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas        57 Jan  8 08:16 setup.sh.local
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas    989835 Jan  8 08:17 agis_schedconf.cvmfs.json
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas   1516240 Jan  8 08:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 10:54:54] drwx------ 5 boincer umatlas      4096 Jan  8 08:17 pilot3
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas      5908 Jan  8 10:46 init_data.xml
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas 219833142 Jan  8 10:53 HITS.47898826._019451.pool.root.1
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas       530 Jan  8 10:53 boinc_task_state.xml
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas      1047 Jan  8 10:54 memory_monitor_summary.json
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas    382202 Jan  8 10:54 log.47898826._019451.job.log.tgz.1
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas        95 Jan  8 10:54 pilot_heartbeat.json
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas      7845 Jan  8 10:54 heartbeat.json
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 10:54 boinc_mmap_file
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas        27 Jan  8 10:54 wrapper_checkpoint.txt
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas       745 Jan  8 10:54 pilotlog.txt
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas   1314794 Jan  8 10:54 log.47898826._019451.job.log.1
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas       357 Jan  8 10:54 output.list
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas       620 Jan  8 10:54 runtime_log
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas   1720320 Jan  8 10:54 result.tar.gz
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas      9337 Jan  8 10:54 runtime_log.err
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas       659 Jan  8 10:54 d9xNDmzA0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOSeKDmMUBhpn.diag
[2026-01-08 10:54:54] -rw-r--r-- 1 boincer umatlas     21318 Jan  8 10:54 stderr.txt
[2026-01-08 10:54:54] HITS file was successfully produced:
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas 219833142 Jan  8 10:53 shared/HITS.pool.root.1
[2026-01-08 10:54:54]  *** Contents of shared directory: ***
[2026-01-08 10:54:54] total 437204
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas 225523751 Jan  8 08:16 ATLAS.root_0
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 08:16 start_atlas.sh
[2026-01-08 10:54:54] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 08:16 input.tar.gz
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas 219833142 Jan  8 10:53 HITS.pool.root.1
[2026-01-08 10:54:54] -rw------- 1 boincer umatlas   1720320 Jan  8 10:54 result.tar.gz
10:54:56 (12319): run_atlas exited; CPU time 71083.734290
10:54:56 (12319): called boinc_finish(0)

</stderr_txt>
]]>

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