Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:44 (4880): wrapper (7.7.26015): starting
20:06:44 (4880): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:06:44] Arguments: --nthreads 8
[2026-01-08 20:06:44] Threads: 8
[2026-01-08 20:06:44] Checking for CVMFS
[2026-01-08 20:06:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:06:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:06:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:06:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:06:47] 2.11.2.0 15174 34356 98700 154917 3 9 12913236 25165824 96 130560 0 15883889 99.880 7387930 3756 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 20:06:47] CVMFS is ok
[2026-01-08 20:06:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:06:47] Checking for apptainer binary...
[2026-01-08 20:06:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:06:47] Running /usr/bin/apptainer --version
[2026-01-08 20:06:47] apptainer version 1.3.2-1.el7
[2026-01-08 20:06:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:07:00] cg-vwn376.simple-grid.lan
[2026-01-08 20:07:00] apptainer works
[2026-01-08 20:07:01] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:07:01] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:07:01] Starting ATLAS job with PandaID=6962916463
[2026-01-08 20:07:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:22:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:22:12] 2026-01-09 01:21:02,878 | INFO     | time since job start (22179s) is within the limit (174528.0s)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,090 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:22:12] 2026-01-09 01:21:04,091 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 02:22:12] 2026-01-09 01:21:04,093 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6962916463/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,094 | INFO     | extracted standard info from prmon json
[2026-01-09 02:22:12] 2026-01-09 01:21:04,094 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:22:12] 2026-01-09 01:21:04,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:22:12] 2026-01-09 01:21:04,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:22:12] 2026-01-09 01:21:04,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:22:12] 2026-01-09 01:21:04,110 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:22:12] 2026-01-09 01:21:04,111 | INFO     | sum of square deviations: 13639518992.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,115 | INFO     | sum of deviations: 128346517713.99997
[2026-01-09 02:22:12] 2026-01-09 01:21:04,116 | INFO     | mean x: 1767910776.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,116 | INFO     | mean y: 2467675.9150141645
[2026-01-09 02:22:12] 2026-01-09 01:21:04,116 | INFO     | intersect: -16633396965.77377
[2026-01-09 02:22:12] 2026-01-09 01:21:04,117 | INFO     | chi2: 8.660093654794935
[2026-01-09 02:22:12] 2026-01-09 01:21:04,117 | INFO     | sum of square deviations: 13068103627.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,121 | INFO     | sum of deviations: 150137356265.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,122 | INFO     | mean x: 1767910623.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,122 | INFO     | mean y: 2473419.7442528736
[2026-01-09 02:22:12] 2026-01-09 01:21:04,122 | INFO     | intersect: -20308769489.102768
[2026-01-09 02:22:12] 2026-01-09 01:21:04,123 | INFO     | chi2: 7.943915609181275
[2026-01-09 02:22:12] 2026-01-09 01:21:04,123 | INFO     | current chi2=7.943915609181275 (change=8.269864901716451 %)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,123 | INFO     | right removable region: 347
[2026-01-09 02:22:12] 2026-01-09 01:21:04,124 | INFO     | sum of square deviations: 13068103627.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,128 | INFO     | sum of deviations: 3225345079.5000114
[2026-01-09 02:22:12] 2026-01-09 01:21:04,128 | INFO     | mean x: 1767910928.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,128 | INFO     | mean y: 2501053.9626436783
[2026-01-09 02:22:12] 2026-01-09 01:21:04,128 | INFO     | intersect: -433837911.2756346
[2026-01-09 02:22:12] 2026-01-09 01:21:04,129 | INFO     | chi2: 3.7136047380742383
[2026-01-09 02:22:12] 2026-01-09 01:21:04,129 | INFO     | current chi2=3.7136047380742383 (change=57.118191949135756 %)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,130 | INFO     | sum of square deviations: 12512874612.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,134 | INFO     | sum of deviations: -88117812300.00002
[2026-01-09 02:22:12] 2026-01-09 01:21:04,134 | INFO     | mean x: 1767911081.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,134 | INFO     | mean y: 2526108.947521866
[2026-01-09 02:22:12] 2026-01-09 01:21:04,134 | INFO     | intersect: 12452459607.781507
[2026-01-09 02:22:12] 2026-01-09 01:21:04,135 | INFO     | chi2: 1.147410107737181
[2026-01-09 02:22:12] 2026-01-09 01:21:04,135 | INFO     | current chi2=1.147410107737181 (change=69.10252467169695 %)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,136 | INFO     | sum of square deviations: 11973599384.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,140 | INFO     | sum of deviations: -101522216216.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,140 | INFO     | mean x: 1767911233.5
[2026-01-09 02:22:12] 2026-01-09 01:21:04,140 | INFO     | mean y: 2529880.144970414
[2026-01-09 02:22:12] 2026-01-09 01:21:04,140 | INFO     | intersect: 14992363825.258303
[2026-01-09 02:22:12] 2026-01-09 01:21:04,141 | INFO     | chi2: 1.0448153698377642
[2026-01-09 02:22:12] 2026-01-09 01:21:04,141 | INFO     | current chi2=1.0448153698377642 (change=8.941418347947524 %)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,141 | INFO     | left removable region: 30
[2026-01-09 02:22:12] 2026-01-09 01:21:04,142 | INFO     | sum of square deviations: 9877610318.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,145 | INFO     | sum of deviations: -47552388167.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,145 | INFO     | mean x: 1767911508.0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,146 | INFO     | mean y: 2527620.2050473187
[2026-01-09 02:22:12] 2026-01-09 01:21:04,146 | INFO     | intersect: 8513534996.161577
[2026-01-09 02:22:12] 2026-01-09 01:21:04,146 | INFO     | chi2: 0.21346264889901798
[2026-01-09 02:22:12] 2026-01-09 01:21:04,146 | INFO     | current memory leak: -4.81 B/s (using 317 data points, chi2=0.21)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,147 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,147 | INFO     | ..............................
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . Timing measurements:
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . get job = 0 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . initial setup = 7 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . payload setup = 160 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . stage-in = 0 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . payload execution = 21683 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . stage-out = 3 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | . log creation = 1 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,148 | INFO     | ..............................
[2026-01-09 02:22:12] 2026-01-09 01:21:04,392 | INFO     | 
[2026-01-09 02:22:12] 2026-01-09 01:21:04,392 | INFO     | job summary report
[2026-01-09 02:22:12] 2026-01-09 01:21:04,392 | INFO     | --------------------------------------------------
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | PanDA job id: 6962916463
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | task id: 47898826
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | errors: (none)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | pilot state: finished 
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | transexitcode: 0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | exeerrorcode: 0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,393 | INFO     | exeerrordiag: 
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | exitcode: 0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | exitmsg: OK
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | cpuconsumptiontime: 81648 s
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | nevents: 400
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | neventsw: 0
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | pid: 15072
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | pgrp: 15072
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | corecount: 8
[2026-01-09 02:22:12] 2026-01-09 01:21:04,394 | INFO     | event service: False
[2026-01-09 02:22:12] 2026-01-09 01:21:04,395 | INFO     | sizes: {0: 2283140, 1: 2283997, 2: 2284025, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 88: 2284377, 98: 2284685, 10
[2026-01-09 02:22:12] 2026-01-09 01:21:04,395 | INFO     | --------------------------------------------------
[2026-01-09 02:22:12] 2026-01-09 01:21:04,395 | INFO     | 
[2026-01-09 02:22:12] 2026-01-09 01:21:04,395 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-09 02:22:12] 2026-01-09 01:21:04,796 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,798 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,799 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:22:12] 2026-01-09 01:21:04,799 | INFO     | job 6962916463 has completed (purged errors)
[2026-01-09 02:22:12] 2026-01-09 01:21:04,799 | INFO     | overall cleanup function is called
[2026-01-09 02:22:12] 2026-01-09 01:21:05,808 | INFO     | --- collectZombieJob: --- 10, [15072]
[2026-01-09 02:22:12] 2026-01-09 01:21:05,808 | INFO     | zombie collector waiting for pid 15072
[2026-01-09 02:22:12] 2026-01-09 01:21:05,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:22:12] 2026-01-09 01:21:05,808 | INFO     | collected zombie processes
[2026-01-09 02:22:12] 2026-01-09 01:21:05,809 | INFO     | will attempt to kill all subprocesses of pid=15072
[2026-01-09 02:22:12] 2026-01-09 01:21:05,890 | INFO     | process IDs to be killed: [15072] (in reverse order)
[2026-01-09 02:22:12] 2026-01-09 01:21:06,997 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:22:12] 2026-01-09 01:21:06,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:22:12] 2026-01-09 01:21:07,000 | INFO     | did not find any defunct processes belonging to 15072
[2026-01-09 02:22:12] 2026-01-09 01:21:07,001 | INFO     | did not find any defunct processes belonging to 15072
[2026-01-09 02:22:12] 2026-01-09 01:21:07,001 | INFO     | ready for new job
[2026-01-09 02:22:12] 2026-01-09 01:21:07,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:22:12] 2026-01-09 01:21:07,004 | INFO     | ***************************************
[2026-01-09 02:22:12] 2026-01-09 01:21:07,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:22:12] 2026-01-09 01:21:07,004 | INFO     | ***************************************
[2026-01-09 02:22:12] 2026-01-09 01:21:07,004 | INFO     | 
[2026-01-09 02:22:12] 2026-01-09 01:21:07,005 | INFO     | pilot is running in a VM
[2026-01-09 02:22:12] 2026-01-09 01:21:07,005 | INFO     | architecture information:
[2026-01-09 02:22:12] 2026-01-09 01:21:07,019 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:22:12] 2026-01-09 01:21:07,346 | INFO     | cat /etc/os-release:
[2026-01-09 02:22:12] NAME="CentOS Linux"
[2026-01-09 02:22:12] VERSION="7 (Core)"
[2026-01-09 02:22:12] ID="centos"
[2026-01-09 02:22:12] ID_LIKE="rhel fedora"
[2026-01-09 02:22:12] VERSION_ID="7"
[2026-01-09 02:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:22:12] ANSI_COLOR="0;31"
[2026-01-09 02:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:22:12] HOME_URL="https://www.centos.org/"
[2026-01-09 02:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:22:12] 
[2026-01-09 02:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:22:12] 
[2026-01-09 02:22:12] 2026-01-09 01:21:07,347 | INFO     | ***************************************
[2026-01-09 02:22:12] 2026-01-09 01:21:07,850 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-09 02:22:12] 2026-01-09 01:21:08,131 | INFO     | sufficient remaining disk space (495796092928 B)
[2026-01-09 02:22:12] 2026-01-09 01:21:08,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:22:12] 2026-01-09 01:21:08,132 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:22:12] 2026-01-09 01:21:08,132 | INFO     | update_server=False
[2026-01-09 02:22:12] 2026-01-09 01:21:08,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:22:12] 2026-01-09 01:21:08,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:22:12] 2026-01-09 01:21:08,334 | INFO     | aborting loop
[2026-01-09 02:22:12] 2026-01-09 01:21:08,360 | INFO     | all data control threads have been joined
[2026-01-09 02:22:12] 2026-01-09 01:21:08,377 | INFO     | all payload control threads have been joined
[2026-01-09 02:22:12] 2026-01-09 01:21:08,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:22:12] 2026-01-09 01:21:09,138 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:22:12] 2026-01-09 01:21:09,340 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,366 | INFO     | [data] control thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,368 | INFO     | all job control threads have been joined
[2026-01-09 02:22:12] 2026-01-09 01:21:09,383 | INFO     | [payload] control thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,437 | INFO     | [job] validate thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,690 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,705 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:09,813 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,153 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,337 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,374 | INFO     | [job] control thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,420 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,452 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:10,504 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:11,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:22:12] 2026-01-09 01:21:15,550 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:22:12] 2026-01-09 01:21:36,057 | INFO     | PID=8610 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 02:22:12] 2026-01-09 01:21:36,057 | INFO     | .. there are 2 such processes running
[2026-01-09 02:22:12] 2026-01-09 01:21:36,057 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:22:12] 2026-01-09 01:21:36,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:22:12] 2026-01-09 01:21:36,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:22:12] 2026-01-09 01:22:01,228 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:22:12] 2026-01-09 01:22:01,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558413952832)>', '<ExcThread(monitor, started 140558186964736)>']
[2026-01-09 02:22:12] 2026-01-09 01:22:02,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:22:12] 2026-01-09 01:22:02,196 | INFO     | [monitor] control thread has ended
[2026-01-09 02:22:12] 2026-01-09 01:22:06,708 | INFO     | all workflow threads have been joined
[2026-01-09 02:22:12] 2026-01-09 01:22:06,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:22:12] 2026-01-09 01:22:06,708 | INFO     | traces error code: 0
[2026-01-09 02:22:12] 2026-01-09 01:22:06,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:22:12] 2026-01-09 01:22:07,187 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:22:12] 2026-01-09 01:22:07,272 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:22:12] 2026-01-09 01:22:07,356 [wrapper] pilotpid: 8610
[2026-01-09 02:22:12] 2026-01-09 01:22:07,454 [wrapper] Pilot exit status: 0
[2026-01-09 02:22:12] 2026-01-09 01:22:07,899 [wrapper] pandaids: 6962916463
[2026-01-09 02:22:12] 2026-01-09 01:22:09,033 [wrapper] cleanup supervisor_pilot 14438 8611
[2026-01-09 02:22:12] 2026-01-09 01:22:09,146 [wrapper] Test setup, not cleaning
[2026-01-09 02:22:12] 2026-01-09 01:22:09,282 [wrapper] apfmon messages muted
[2026-01-09 02:22:12] 2026-01-09 01:22:09,394 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:22:12] 2026-01-09 01:22:09,502 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:22:12]  *** Error codes and diagnostics ***
[2026-01-09 02:22:12]     "exeErrorCode": 0,
[2026-01-09 02:22:12]     "exeErrorDiag": "",
[2026-01-09 02:22:12]     "pilotErrorCode": 0,
[2026-01-09 02:22:12]     "pilotErrorDiag": "",
[2026-01-09 02:22:12]  *** Listing of results directory ***
[2026-01-09 02:22:12] total 443428
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-09 02:22:12] -rwx------. 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc       100 Jan  8 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:22:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 20:06 run_atlas
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc       105 Jan  8 20:06 job.xml
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc      6392 Jan  8 20:06 init_data.xml
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc 223235424 Jan  8 20:06 EVNT.47898824._000624.pool.root.1
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc     15847 Jan  8 20:06 start_atlas.sh
[2026-01-09 02:22:12] drwxrwx--x. 2 boinc boinc        68 Jan  8 20:06 shared
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc    592391 Jan  8 20:06 input.tar.gz
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc         0 Jan  8 20:06 boinc_lockfile
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc      2518 Jan  8 20:07 pandaJob.out
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc    989829 Jan  8 20:11 agis_schedconf.cvmfs.json
[2026-01-09 02:22:12] drwx------. 5 boinc boinc      4096 Jan  8 20:11 pilot3
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc 219947712 Jan  9 02:17 HITS.47898826._019035.pool.root.1
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc       531 Jan  9 02:17 boinc_task_state.xml
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc      1012 Jan  9 02:19 memory_monitor_summary.json
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc   1516240 Jan  9 02:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc    555292 Jan  9 02:19 log.47898826._019035.job.log.tgz.1
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc        95 Jan  9 02:21 pilot_heartbeat.json
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc      7775 Jan  9 02:21 heartbeat.json
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc      8192 Jan  9 02:21 boinc_mmap_file
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc        28 Jan  9 02:21 wrapper_checkpoint.txt
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc      4884 Jan  9 02:22 pilotlog.txt
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc   2939361 Jan  9 02:22 log.47898826._019035.job.log.1
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc       357 Jan  9 02:22 output.list
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc       620 Jan  9 02:22 runtime_log
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc   3512320 Jan  9 02:22 result.tar.gz
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc      8833 Jan  9 02:22 runtime_log.err
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc       657 Jan  9 02:22 OiSLDmcA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVajKDmgFv0Hn.diag
[2026-01-09 02:22:12] -rw-r--r--. 1 boinc boinc     20773 Jan  9 02:22 stderr.txt
[2026-01-09 02:22:12] HITS file was successfully produced:
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc 219947712 Jan  9 02:17 shared/HITS.pool.root.1
[2026-01-09 02:22:12]  *** Contents of shared directory: ***
[2026-01-09 02:22:12] total 436828
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc 223235424 Jan  8 20:06 ATLAS.root_0
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc     15847 Jan  8 20:06 start_atlas.sh
[2026-01-09 02:22:12] -rw-r--r--. 2 boinc boinc    592391 Jan  8 20:06 input.tar.gz
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc 219947712 Jan  9 02:17 HITS.pool.root.1
[2026-01-09 02:22:12] -rw-------. 1 boinc boinc   3512320 Jan  9 02:22 result.tar.gz
02:22:14 (4880): run_atlas exited; CPU time 81864.187424
02:22:14 (4880): called boinc_finish(0)

</stderr_txt>
]]>

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