Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 07:06:45 (5512): vboxwrapper version 26210
2026-01-08 07:06:45 (5512): BOINC client version: 8.2.8
2026-01-08 07:06:45 (5512): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-08 07:06:45 (5512): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 07:06:46 (5512): Create VM. (boinc_a7e23a1c5d4f1e06, slot#4)
2026-01-08 07:06:46 (5512): Setting Memory Size for VM. (4400MB)
2026-01-08 07:06:46 (5512): Setting CPU Count for VM. (4)
2026-01-08 07:06:47 (5512): Setting Chipset Options for VM.
2026-01-08 07:06:47 (5512): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 07:06:47 (5512): Setting Boot Options for VM.
2026-01-08 07:06:48 (5512): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 07:06:48 (5512): Enabling VM Network Access.
2026-01-08 07:06:48 (5512): Disabling USB Support for VM.
2026-01-08 07:06:48 (5512): Disabling COM Port Support for VM.
2026-01-08 07:06:49 (5512): Disabling LPT Port Support for VM.
2026-01-08 07:06:49 (5512): Disabling Audio Support for VM.
2026-01-08 07:06:49 (5512): Disabling Clipboard Support for VM.
2026-01-08 07:06:49 (5512): Disabling Drag and Drop Support for VM.
2026-01-08 07:06:50 (5512): Adding storage controller(s) to VM.
2026-01-08 07:06:50 (5512): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 07:06:50 (5512): Adding VirtualBox Guest Additions to VM.
2026-01-08 07:06:51 (5512): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 07:06:51 (5512): forwarding host port 55302 to guest port 80
2026-01-08 07:06:51 (5512): Enabling remote desktop for VM.
2026-01-08 07:06:52 (5512): Required extension pack not installed, remote desktop not enabled.
2026-01-08 07:06:52 (5512): Enabling shared directory for VM.
2026-01-08 07:06:52 (5512): Starting VM using VBoxManage interface. (boinc_a7e23a1c5d4f1e06, slot#4)
2026-01-08 07:06:58 (5512): Successfully started VM. (PID = '15048')
2026-01-08 07:06:58 (5512): Reporting VM Process ID to BOINC.
2026-01-08 07:06:58 (5512): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-08 07:06:58 (5512): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 07:06:58 (5512): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 07:06:58 (5512): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 07:06:58 (5512): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 07:06:58 (5512): Detected: Web Application Enabled (http://localhost:55302)
2026-01-08 07:06:58 (5512): Preference change detected
2026-01-08 07:06:58 (5512): Setting CPU throttle for VM. (100%)
2026-01-08 07:06:59 (5512): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 07:07:00 (5512): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 07:07:00 (5512): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 07:07:03 (5512): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 07:07:03 (5512): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 07:07:03 (5512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 07:08:08 (5512): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 07:08:08 (5512): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 07:08:14 (5512): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 07:08:14 (5512): Guest Log: 00:00:00.000165 main     Log opened 2026-01-08T07:08:13.190051000Z
2026-01-08 07:08:14 (5512): Guest Log: 00:00:00.000297 main     OS Product: Linux
2026-01-08 07:08:14 (5512): Guest Log: 00:00:00.000341 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 07:08:15 (5512): Guest Log: 00:00:00.000382 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 07:08:15 (5512): Guest Log: 00:00:00.000422 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 07:08:15 (5512): Guest Log: 00:00:00.000424 main     Process ID: 1308
2026-01-08 07:08:15 (5512): Guest Log: 00:00:00.000424 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 07:08:15 (5512): Guest Log: 00:00:00.001240 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 07:08:15 (5512): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 07:08:15 (5512): Guest Log: [INFO] Mounting shared directory
2026-01-08 07:08:15 (5512): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 07:08:20 (5512): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 07:08:20 (5512): Guest Log: [INFO] Detected branch: prod
2026-01-08 07:08:20 (5512): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 07:08:20 (5512): Guest Log: Copying input files
2026-01-08 07:08:21 (5512): Guest Log: Copied input files into RunAtlas.
2026-01-08 07:08:21 (5512): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 07:08:21 (5512): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 07:08:21 (5512): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 07:08:22 (5512): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 07:08:24 (5512): Guest Log: 00:00:10.003674 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 607 451 268 000ns (GuestNow=1 767 877 700 643 887 000 ns GuestLast=1 767 856 093 192 619 000 ns fSetTimeLastLoop=true )
2026-01-08 07:08:32 (5512): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 07:08:32 (5512): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 07:08:32 (5512): Guest Log: 2.6.3.0 1588 0 30184 154908 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 07:08:32 (5512): Guest Log: copied the webapp to /var/www
2026-01-08 07:08:33 (5512): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-08 07:08:33 (5512): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-08 07:08:33 (5512): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 07:08:33 (5512): Guest Log:  *** Starting ATLAS job. (PandaID=6962916248 taskID=47898826) ***
2026-01-08 08:47:01 (5512): Status Report: Elapsed Time: '6000.000000'
2026-01-08 08:47:01 (5512): Status Report: CPU Time: '21559.078125'
2026-01-08 10:27:04 (5512): Status Report: Elapsed Time: '12000.000000'
2026-01-08 10:27:04 (5512): Status Report: CPU Time: '45358.328125'
2026-01-08 11:01:22 (5512): Guest Log:  *** Job finished ***
2026-01-08 11:01:22 (5512): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:00,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:00,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:04,952 | INFO     | [monitor] cgroup control has ended
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:06,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220245751616)>', '<ExcThread(monitor, started 140219626002176)>']
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:07,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:07,599 | INFO     | [monitor] control thread has ended
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,715 | INFO     | all workflow threads have been joined
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,715 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,715 | INFO     | traces error code: 0
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,809 [wrapper] ==== pilot stdout END ====
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,815 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,821 [wrapper] pilotpid: 5998
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,826 [wrapper] Pilot exit status: 0
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,941 [wrapper] pandaids: 6962916248
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,980 [wrapper] cleanup supervisor_pilot 14091 5999
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,991 [wrapper] Test setup, not cleaning
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:11,996 [wrapper] apfmon messages muted
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:12,002 [wrapper] ==== wrapper stdout END ====
2026-01-08 11:01:22 (5512): Guest Log: 2026-01-08 17:01:12,009 [wrapper] ==== wrapper stderr END ====
2026-01-08 11:01:22 (5512): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 11:01:22 (5512): Guest Log:     "exeErrorCode": 0,
2026-01-08 11:01:22 (5512): Guest Log:     "exeErrorDiag": "",
2026-01-08 11:01:22 (5512): Guest Log:     "pilotErrorCode": 0,
2026-01-08 11:01:22 (5512): Guest Log:     "pilotErrorDiag": "",
2026-01-08 11:01:22 (5512): Guest Log:  *** Listing of results directory ***
2026-01-08 11:01:22 (5512): Guest Log: total 216712
2026-01-08 11:01:22 (5512): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 07:56 pilot3.tar.gz
2026-01-08 11:01:22 (5512): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 08:03 runpilot2-wrapper.sh
2026-01-08 11:01:22 (5512): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 08:05 queuedata.json
2026-01-08 11:01:22 (5512): Guest Log: -rwxr-xr-x. 1 atlas atlas      8682 Jan  8 13:08 init_data.xml
2026-01-08 11:01:22 (5512): Guest Log: -rwxr-xr-x. 1 atlas atlas    592390 Jan  8 13:08 input.tar.gz
2026-01-08 11:01:22 (5512): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 13:08 start_atlas.sh
2026-01-08 11:01:22 (5512): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 13:08 EVNT.47898824._000451.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 11:01:22 (5512): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan  8 13:08 pandaJob.out
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas    989843 Jan  8 13:09 agis_schedconf.cvmfs.json
2026-01-08 11:01:22 (5512): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 13:09 pilot3
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas 213579839 Jan  8 16:59 HITS.47898826._018835.pool.root.1
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas      1030 Jan  8 17:00 memory_monitor_summary.json
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  8 17:00 agis_ddmendpoints.agis.ALL.json
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas    387240 Jan  8 17:00 log.47898826._018835.job.log.tgz.1
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas      7797 Jan  8 17:00 heartbeat.json
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas        95 Jan  8 17:01 pilot_heartbeat.json
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas      4805 Jan  8 17:01 pilotlog.txt
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas   1857226 Jan  8 17:01 log.47898826._018835.job.log.1
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas       357 Jan  8 17:01 output.list
2026-01-08 11:01:22 (5512): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  8 17:01 runtime_log
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas   2263040 Jan  8 17:01 result.tar.gz
2026-01-08 11:01:22 (5512): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Jan  8 17:01 runtime_log.err
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas       661 Jan  8 17:01 mrQKDmQA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3YjKDmhpkIRn.diag
2026-01-08 11:01:22 (5512): Guest Log: Looking for outputfile HITS.47898826._018835.pool.root.1
2026-01-08 11:01:22 (5512): Guest Log: HITS file was successfully produced
2026-01-08 11:01:22 (5512): Guest Log: -rw-------. 1 atlas atlas 213579839 Jan  8 16:59 /home/atlas/RunAtlas/HITS.47898826._018835.pool.root.1
2026-01-08 11:01:23 (5512): Guest Log: Successfully finished the ATLAS job!
2026-01-08 11:01:23 (5512): Guest Log: Copying the results back to the shared directory!
2026-01-08 11:01:23 (5512): Guest Log:  *** Contents of shared directory: ***
2026-01-08 11:01:23 (5512): Guest Log: total 427748
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root 221543329 Jan  8 13:06 ATLAS.root_0
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root 213579839 Jan  8  2026 HITS.pool.root.1
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root      8682 Jan  8 13:06 init_data.xml
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root    592390 Jan  8 12:59 input.tar.gz
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root   2263040 Jan  8  2026 result.tar.gz
2026-01-08 11:01:23 (5512): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 12:59 start_atlas.sh
2026-01-08 11:01:23 (5512): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 11:01:23 (5512): VM Completion File Detected.
2026-01-08 11:01:23 (5512): Powering off VM.
2026-01-08 11:01:24 (5512): Successfully stopped VM.
2026-01-08 11:01:24 (5512): Deregistering VM. (boinc_a7e23a1c5d4f1e06, slot#4)
2026-01-08 11:01:24 (5512): Removing network bandwidth throttle group from VM.
2026-01-08 11:01:24 (5512): Removing VM from VirtualBox.
2026-01-08 11:01:29 (5512): called boinc_finish(0)

</stderr_txt>
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