Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:09 (723665): wrapper (7.7.26015): starting
08:11:09 (723665): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 08:11:09] Arguments: --nthreads 8
[2026-01-08 08:11:09] Threads: 8
[2026-01-08 08:11:09] Checking for CVMFS
[2026-01-08 08:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:11:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:11:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:11:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:11:12] 2.13.3.0 9734 19678 188828 154908 2 341 27577876 39288833 9143 16776704 0 8760094 99.300 14331819 36667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 08:11:12] CVMFS is ok
[2026-01-08 08:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:11:12] Further information can be found at the LHC@home message board.
[2026-01-08 08:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:11:12] Checking for apptainer binary...
[2026-01-08 08:11:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:11:12] Running /usr/bin/apptainer --version
[2026-01-08 08:11:13] apptainer version 1.4.5-2.el9
[2026-01-08 08:11:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:11:15] c-210-4.aglt2.org
[2026-01-08 08:11:15] apptainer works
[2026-01-08 08:11:15] Set ATHENA_PROC_NUMBER=8
[2026-01-08 08:11:15] Set ATHENA_CORE_NUMBER=8
[2026-01-08 08:11:15] Starting ATLAS job with PandaID=6962916196
[2026-01-08 08:11:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:28:09]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:28:09] 2026-01-08 21:27:06,953 | INFO     | time since job start (29637s) is within the limit (174528.0s)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,116 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 16:28:09] 2026-01-08 21:27:07,142 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1662000000006
[2026-01-08 16:28:09] 2026-01-08 21:27:07,158 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962916196/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,158 | INFO     | extracted standard info from prmon json
[2026-01-08 16:28:09] 2026-01-08 21:27:07,159 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:28:09] 2026-01-08 21:27:07,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:28:09] 2026-01-08 21:27:07,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:28:09] 2026-01-08 21:27:07,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:28:09] 2026-01-08 21:27:07,169 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:28:09] 2026-01-08 21:27:07,170 | INFO     | sum of square deviations: 34719826329.03119
[2026-01-08 16:28:09] 2026-01-08 21:27:07,175 | INFO     | sum of deviations: 113432988081.07881
[2026-01-08 16:28:09] 2026-01-08 21:27:07,175 | INFO     | mean x: 1767892894.3755186
[2026-01-08 16:28:09] 2026-01-08 21:27:07,175 | INFO     | mean y: 2544053.684647303
[2026-01-08 16:28:09] 2026-01-08 21:27:07,176 | INFO     | intersect: -5773330851.790948
[2026-01-08 16:28:09] 2026-01-08 21:27:07,176 | INFO     | chi2: 6.176536624501845
[2026-01-08 16:28:09] 2026-01-08 21:27:07,177 | INFO     | sum of square deviations: 33650530332.65812
[2026-01-08 16:28:09] 2026-01-08 21:27:07,183 | INFO     | sum of deviations: 110556226005.71277
[2026-01-08 16:28:09] 2026-01-08 21:27:07,183 | INFO     | mean x: 1767892741.884696
[2026-01-08 16:28:09] 2026-01-08 21:27:07,183 | INFO     | mean y: 2543644.4675052413
[2026-01-08 16:28:09] 2026-01-08 21:27:07,183 | INFO     | intersect: -5805731814.893571
[2026-01-08 16:28:09] 2026-01-08 21:27:07,184 | INFO     | chi2: 6.1768648283496095
[2026-01-08 16:28:09] 2026-01-08 21:27:07,184 | INFO     | current chi2=6.1768648283496095 (change=-0.005313719770755485 %)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,184 | INFO     | right removable region: 476
[2026-01-08 16:28:09] 2026-01-08 21:27:07,185 | INFO     | sum of square deviations: 33650272912.658108
[2026-01-08 16:28:09] 2026-01-08 21:27:07,190 | INFO     | sum of deviations: -42630084058.165634
[2026-01-08 16:28:09] 2026-01-08 21:27:07,190 | INFO     | mean x: 1767893046.884696
[2026-01-08 16:28:09] 2026-01-08 21:27:07,190 | INFO     | mean y: 2566290.3060796647
[2026-01-08 16:28:09] 2026-01-08 21:27:07,191 | INFO     | intersect: 2242233986.0230794
[2026-01-08 16:28:09] 2026-01-08 21:27:07,191 | INFO     | chi2: 2.3538434495077842
[2026-01-08 16:28:09] 2026-01-08 21:27:07,192 | INFO     | current chi2=2.3538434495077842 (change=61.89056112497951 %)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,192 | INFO     | sum of square deviations: 32602964520.271088
[2026-01-08 16:28:09] 2026-01-08 21:27:07,197 | INFO     | sum of deviations: -141257049862.3898
[2026-01-08 16:28:09] 2026-01-08 21:27:07,198 | INFO     | mean x: 1767893199.3898306
[2026-01-08 16:28:09] 2026-01-08 21:27:07,198 | INFO     | mean y: 2580631.252118644
[2026-01-08 16:28:09] 2026-01-08 21:27:07,198 | INFO     | intersect: 7662233104.33688
[2026-01-08 16:28:09] 2026-01-08 21:27:07,199 | INFO     | chi2: 0.7491906176296715
[2026-01-08 16:28:09] 2026-01-08 21:27:07,199 | INFO     | current chi2=0.7491906176296715 (change=68.17160385979213 %)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,200 | INFO     | sum of square deviations: 31577552076.269733
[2026-01-08 16:28:09] 2026-01-08 21:27:07,205 | INFO     | sum of deviations: -145485622298.10278
[2026-01-08 16:28:09] 2026-01-08 21:27:07,205 | INFO     | mean x: 1767893351.8993576
[2026-01-08 16:28:09] 2026-01-08 21:27:07,205 | INFO     | mean y: 2581247.6573875803
[2026-01-08 16:28:09] 2026-01-08 21:27:07,205 | INFO     | intersect: 8147704841.675392
[2026-01-08 16:28:09] 2026-01-08 21:27:07,206 | INFO     | chi2: 0.7079589470004206
[2026-01-08 16:28:09] 2026-01-08 21:27:07,206 | INFO     | current chi2=0.7079589470004206 (change=5.503495326690268 %)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,206 | INFO     | left removable region: 30
[2026-01-08 16:28:09] 2026-01-08 21:27:07,207 | INFO     | sum of square deviations: 27506392704.961857
[2026-01-08 16:28:09] 2026-01-08 21:27:07,211 | INFO     | sum of deviations: -77174795669.05386
[2026-01-08 16:28:09] 2026-01-08 21:27:07,212 | INFO     | mean x: 1767893626.3789237
[2026-01-08 16:28:09] 2026-01-08 21:27:07,212 | INFO     | mean y: 2570348.8878923766
[2026-01-08 16:28:09] 2026-01-08 21:27:07,212 | INFO     | intersect: 4962756544.288366
[2026-01-08 16:28:09] 2026-01-08 21:27:07,213 | INFO     | chi2: 0.5481484402458725
[2026-01-08 16:28:09] 2026-01-08 21:27:07,213 | INFO     | current memory leak: -2.81 B/s (using 446 data points, chi2=0.55)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | ..............................
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . Timing measurements:
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . get job = 0 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . initial setup = 6 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . payload setup = 75 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . stage-in = 1 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . payload execution = 29426 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,214 | INFO     | . stage-out = 3 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,215 | INFO     | . log creation = 0 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,215 | INFO     | ..............................
[2026-01-08 16:28:09] 2026-01-08 21:27:07,320 | INFO     | 
[2026-01-08 16:28:09] 2026-01-08 21:27:07,321 | INFO     | job summary report
[2026-01-08 16:28:09] 2026-01-08 21:27:07,321 | INFO     | --------------------------------------------------
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | PanDA job id: 6962916196
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | task id: 47898826
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | errors: (none)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | pilot state: finished 
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | transexitcode: 0
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | exeerrorcode: 0
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | exeerrordiag: 
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | exitcode: 0
[2026-01-08 16:28:09] 2026-01-08 21:27:07,322 | INFO     | exitmsg: OK
[2026-01-08 16:28:09] 2026-01-08 21:27:07,328 | INFO     | cpuconsumptiontime: 67469 s
[2026-01-08 16:28:09] 2026-01-08 21:27:07,328 | INFO     | nevents: 400
[2026-01-08 16:28:09] 2026-01-08 21:27:07,328 | INFO     | neventsw: 0
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | pid: 741179
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | pgrp: 741179
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | corecount: 8
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | event service: False
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2283825, 3: 2284024, 4: 2284052, 15: 2284080, 27: 2284236, 39: 2284264, 51: 2284292, 53: 2284582, 62: 2284610, 29505: 2322759, 2
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | --------------------------------------------------
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | 
[2026-01-08 16:28:09] 2026-01-08 21:27:07,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 16:28:09] 2026-01-08 21:27:07,363 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,364 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,364 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,364 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,365 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | job 6962916196 has completed (purged errors)
[2026-01-08 16:28:09] 2026-01-08 21:27:07,366 | INFO     | overall cleanup function is called
[2026-01-08 16:28:09] 2026-01-08 21:27:08,375 | INFO     | --- collectZombieJob: --- 10, [741179]
[2026-01-08 16:28:09] 2026-01-08 21:27:08,375 | INFO     | zombie collector waiting for pid 741179
[2026-01-08 16:28:09] 2026-01-08 21:27:08,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:28:09] 2026-01-08 21:27:08,376 | INFO     | collected zombie processes
[2026-01-08 16:28:09] 2026-01-08 21:27:08,376 | INFO     | will attempt to kill all subprocesses of pid=741179
[2026-01-08 16:28:09] 2026-01-08 21:27:08,714 | INFO     | process IDs to be killed: [741179] (in reverse order)
[2026-01-08 16:28:09] 2026-01-08 21:27:08,813 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:28:09] 2026-01-08 21:27:08,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:28:09] 2026-01-08 21:27:08,828 | INFO     | did not find any defunct processes belonging to 741179
[2026-01-08 16:28:09] 2026-01-08 21:27:08,860 | INFO     | did not find any defunct processes belonging to 741179
[2026-01-08 16:28:09] 2026-01-08 21:27:08,860 | INFO     | ready for new job
[2026-01-08 16:28:09] 2026-01-08 21:27:08,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:28:09] 2026-01-08 21:27:08,864 | INFO     | ***************************************
[2026-01-08 16:28:09] 2026-01-08 21:27:08,864 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:28:09] 2026-01-08 21:27:08,864 | INFO     | ***************************************
[2026-01-08 16:28:09] 2026-01-08 21:27:08,865 | INFO     | 
[2026-01-08 16:28:09] 2026-01-08 21:27:08,880 | INFO     | architecture information:
[2026-01-08 16:28:09] 2026-01-08 21:27:08,885 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:28:09] 2026-01-08 21:27:08,970 | INFO     | cat /etc/os-release:
[2026-01-08 16:28:09] NAME="CentOS Linux"
[2026-01-08 16:28:09] VERSION="7 (Core)"
[2026-01-08 16:28:09] ID="centos"
[2026-01-08 16:28:09] ID_LIKE="rhel fedora"
[2026-01-08 16:28:09] VERSION_ID="7"
[2026-01-08 16:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:28:09] ANSI_COLOR="0;31"
[2026-01-08 16:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:28:09] HOME_URL="https://www.centos.org/"
[2026-01-08 16:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:28:09] 
[2026-01-08 16:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:28:09] 
[2026-01-08 16:28:09] 2026-01-08 21:27:08,971 | INFO     | ***************************************
[2026-01-08 16:28:09] 2026-01-08 21:27:09,474 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 16:28:09] 2026-01-08 21:27:09,506 | INFO     | sufficient remaining disk space (53557067776 B)
[2026-01-08 16:28:09] 2026-01-08 21:27:09,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:28:09] 2026-01-08 21:27:09,507 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:28:09] 2026-01-08 21:27:09,507 | INFO     | update_server=False
[2026-01-08 16:28:09] 2026-01-08 21:27:09,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:28:09] 2026-01-08 21:27:09,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:28:09] 2026-01-08 21:27:09,508 | INFO     | aborting loop
[2026-01-08 16:28:09] 2026-01-08 21:27:09,542 | INFO     | all data control threads have been joined
[2026-01-08 16:28:09] 2026-01-08 21:27:09,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:28:09] 2026-01-08 21:27:10,513 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,514 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,534 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,548 | INFO     | [data] control thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,554 | INFO     | all job control threads have been joined
[2026-01-08 16:28:09] 2026-01-08 21:27:10,567 | INFO     | all payload control threads have been joined
[2026-01-08 16:28:09] 2026-01-08 21:27:10,598 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,733 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:10,939 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,072 | INFO     | [job] validate thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,076 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,559 | INFO     | [job] control thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,572 | INFO     | [payload] control thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,680 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:11,926 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:12,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:28:09] 2026-01-08 21:27:12,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:28:09] 2026-01-08 21:27:13,340 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:16,453 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:28:09] 2026-01-08 21:27:40,740 | INFO     | PID=729532 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 16:28:09] 2026-01-08 21:27:40,741 | INFO     | .. there are 6 such processes running
[2026-01-08 16:28:09] 2026-01-08 21:27:40,742 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:28:09] 2026-01-08 21:27:40,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:28:09] 2026-01-08 21:27:40,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:28:09] 2026-01-08 21:28:02,944 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:28:09] 2026-01-08 21:28:03,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669247092544)>', '<ExcThread(monitor, started 140668894701312)>']
[2026-01-08 16:28:09] 2026-01-08 21:28:03,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:28:09] 2026-01-08 21:28:03,876 | INFO     | [monitor] control thread has ended
[2026-01-08 16:28:09] 2026-01-08 21:28:05,849 [wrapper] supervise_pilot (15 min periods counter: 34)
[2026-01-08 16:28:09] 2026-01-08 21:28:08,831 | INFO     | all workflow threads have been joined
[2026-01-08 16:28:09] 2026-01-08 21:28:08,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:28:09] 2026-01-08 21:28:08,832 | INFO     | traces error code: 0
[2026-01-08 16:28:09] 2026-01-08 21:28:08,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:28:09] 2026-01-08 21:28:09,005 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:28:09] 2026-01-08 21:28:09,008 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:28:09] 2026-01-08 21:28:09,011 [wrapper] pilotpid: 729532
[2026-01-08 16:28:09] 2026-01-08 21:28:09,013 [wrapper] Pilot exit status: 0
[2026-01-08 16:28:09] 2026-01-08 21:28:09,141 [wrapper] pandaids: 6962916196
[2026-01-08 16:28:09] 2026-01-08 21:28:09,463 [wrapper] cleanup supervisor_pilot 1500444 729533
[2026-01-08 16:28:09] 2026-01-08 21:28:09,466 [wrapper] Test setup, not cleaning
[2026-01-08 16:28:09] 2026-01-08 21:28:09,468 [wrapper] apfmon messages muted
[2026-01-08 16:28:09] 2026-01-08 21:28:09,470 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:28:09] 2026-01-08 21:28:09,473 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:28:09]  *** Error codes and diagnostics ***
[2026-01-08 16:28:09]     "exeErrorCode": 0,
[2026-01-08 16:28:09]     "exeErrorDiag": "",
[2026-01-08 16:28:09]     "pilotErrorCode": 0,
[2026-01-08 16:28:09]     "pilotErrorDiag": "",
[2026-01-08 16:28:09]  *** Listing of results directory ***
[2026-01-08 16:28:09] total 446792
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 16:28:09] -rwx------. 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:05 queuedata.json
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas       100 Jan  8 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:28:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 08:11 run_atlas
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas       105 Jan  8 08:11 job.xml
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas 223799010 Jan  8 08:11 EVNT.47898824._000449.pool.root.1
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 08:11 start_atlas.sh
[2026-01-08 16:28:09] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 08:11 shared
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 08:11 input.tar.gz
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas         0 Jan  8 08:11 boinc_lockfile
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 08:11 pandaJob.out
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas        57 Jan  8 08:11 setup.sh.local
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas    989843 Jan  8 08:13 agis_schedconf.cvmfs.json
[2026-01-08 16:28:09] drwx------. 5 boincer umatlas      4096 Jan  8 08:13 pilot3
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas      6660 Jan  8 16:19 init_data.xml
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas 220994748 Jan  8 16:26 HITS.47898826._018783.pool.root.1
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas       531 Jan  8 16:26 boinc_task_state.xml
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas      1041 Jan  8 16:26 memory_monitor_summary.json
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas   1516240 Jan  8 16:26 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas    650871 Jan  8 16:26 log.47898826._018783.job.log.tgz.1
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas      7822 Jan  8 16:27 heartbeat.json
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 16:27 boinc_mmap_file
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas        95 Jan  8 16:27 pilot_heartbeat.json
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas        28 Jan  8 16:27 wrapper_checkpoint.txt
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas      4822 Jan  8 16:28 pilotlog.txt
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas   3755932 Jan  8 16:28 log.47898826._018783.job.log.1
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas       357 Jan  8 16:28 output.list
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas       620 Jan  8 16:28 runtime_log
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas   4423680 Jan  8 16:28 result.tar.gz
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 16:28 runtime_log.err
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas       656 Jan  8 16:28 OcEMDmEA0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJQeKDmhBr1So.diag
[2026-01-08 16:28:09] -rw-r--r--. 1 boincer umatlas     21196 Jan  8 16:28 stderr.txt
[2026-01-08 16:28:09] HITS file was successfully produced:
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas 220994748 Jan  8 16:26 shared/HITS.pool.root.1
[2026-01-08 16:28:09]  *** Contents of shared directory: ***
[2026-01-08 16:28:09] total 439292
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas 223799010 Jan  8 08:11 ATLAS.root_0
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 08:11 start_atlas.sh
[2026-01-08 16:28:09] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 08:11 input.tar.gz
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas 220994748 Jan  8 16:26 HITS.pool.root.1
[2026-01-08 16:28:09] -rw-------. 1 boincer umatlas   4423680 Jan  8 16:28 result.tar.gz
16:28:10 (723665): run_atlas exited; CPU time 68188.459593
16:28:10 (723665): called boinc_finish(0)

</stderr_txt>
]]>

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