Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:46 (738807): wrapper (7.7.26015): starting
13:48:46 (738807): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 13:48:46] Arguments: --nthreads 4
[2026-01-08 13:48:46] Threads: 4
[2026-01-08 13:48:46] Checking for CVMFS
[2026-01-08 13:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:48:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:48:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:48:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:48:46] 2.12.7.0 702796 188 54376 154908 0 56 3627127 4097024 0 130560 0 110375 99.971 13682 36779 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-08 13:48:46] CVMFS is ok
[2026-01-08 13:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:48:46] Further information can be found at the LHC@home message board.
[2026-01-08 13:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:48:46] Checking for apptainer binary...
[2026-01-08 13:48:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-08 13:48:46] apptainer is not installed, using version from CVMFS
[2026-01-08 13:48:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:48:48] pckeatlas05
[2026-01-08 13:48:48] apptainer works
[2026-01-08 13:48:48] Set ATHENA_PROC_NUMBER=4
[2026-01-08 13:48:48] Set ATHENA_CORE_NUMBER=4
[2026-01-08 13:48:48] Starting ATLAS job with PandaID=6962915949
[2026-01-08 13:48:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:57:21]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:57:21] 2026-01-08 15:56:40,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,394 | INFO     | time since job start (11263s) is within the limit (174528.0s)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,587 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 16:57:21] 2026-01-08 15:56:40,587 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3729.3259999999996
[2026-01-08 16:57:21] 2026-01-08 15:56:40,588 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6962915949/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,588 | INFO     | extracted standard info from prmon json
[2026-01-08 16:57:21] 2026-01-08 15:56:40,588 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:57:21] 2026-01-08 15:56:40,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:57:21] 2026-01-08 15:56:40,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:57:21] 2026-01-08 15:56:40,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:57:21] 2026-01-08 15:56:40,591 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:57:21] 2026-01-08 15:56:40,591 | INFO     | sum of square deviations: 1963274020.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | sum of deviations: -40957607772.999985
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | mean x: 1767882176.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | mean y: 2422622.762162162
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | intersect: 36883787127.08424
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | chi2: 2.017668943824704
[2026-01-08 16:57:21] 2026-01-08 15:56:40,592 | INFO     | sum of square deviations: 1808350185.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | sum of deviations: -28939937352.50001
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | mean x: 1767882023.5
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | mean y: 2434220.5833333335
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | intersect: 28294739234.89169
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | chi2: 1.3648483079371456
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | current chi2=1.3648483079371456 (change=32.35519077029893 %)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,593 | INFO     | sum of square deviations: 1661798600.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | sum of deviations: -27874216082.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | mean x: 1767881871.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | mean y: 2435329.822857143
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | intersect: 29656041536.79911
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | chi2: 1.3601492720522208
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | current chi2=1.3601492720522208 (change=0.3442899740284705 %)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,594 | INFO     | right removable region: 174
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | sum of square deviations: 1808350185.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | sum of deviations: -53137439312.5
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | mean x: 1767882328.5
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | mean y: 2434262.1277777776
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | intersect: 51950746442.77433
[2026-01-08 16:57:21] 2026-01-08 15:56:40,595 | INFO     | chi2: 0.9788963081880968
[2026-01-08 16:57:21] 2026-01-08 15:56:40,596 | INFO     | current chi2=0.9788963081880968 (change=51.48379960032018 %)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,596 | INFO     | sum of square deviations: 1661798600.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,596 | INFO     | sum of deviations: -44311556316.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,596 | INFO     | mean x: 1767882481.0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,596 | INFO     | mean y: 2425070.12
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | intersect: 47142688707.90457
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | chi2: 0.9519642494577971
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | current chi2=0.9519642494577971 (change=2.7512677803586776 %)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | left removable region: 20
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | sum of square deviations: 1132458442.5
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | sum of deviations: -14401520072.999998
[2026-01-08 16:57:21] 2026-01-08 15:56:40,597 | INFO     | mean x: 1767882450.5
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | mean y: 2416671.311688312
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | intersect: 22484649698.22488
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | chi2: 0.1714690582894708
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | current memory leak: -12.72 B/s (using 154 data points, chi2=0.17)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | could have reported an average CPU frequency of 3702 MHz (10 samples)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | ..............................
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . Timing measurements:
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . get job = 0 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . initial setup = 1 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . payload setup = 7 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . stage-in = 0 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,598 | INFO     | . payload execution = 11230 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,599 | INFO     | . stage-out = 0 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,599 | INFO     | . log creation = 0 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,599 | INFO     | ..............................
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | 
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | job summary report
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | --------------------------------------------------
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | PanDA job id: 6962915949
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | task id: 47898826
[2026-01-08 16:57:21] 2026-01-08 15:56:40,994 | INFO     | errors: (none)
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | pilot state: finished 
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | transexitcode: 0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | exeerrorcode: 0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | exeerrordiag: 
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | exitcode: 0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | exitmsg: OK
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | cpuconsumptiontime: 43731 s
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | nevents: 400
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | neventsw: 0
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | pid: 749635
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | pgrp: 749635
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | corecount: 4
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | event service: False
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | sizes: {0: 2283968, 4: 2284230, 11: 2284258, 11241: 2313544, 11243: 2322598, 11248: 2322736}
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | --------------------------------------------------
[2026-01-08 16:57:21] 2026-01-08 15:56:40,995 | INFO     | 
[2026-01-08 16:57:21] 2026-01-08 15:56:40,996 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | job 6962915949 has completed (purged errors)
[2026-01-08 16:57:21] 2026-01-08 15:56:41,005 | INFO     | overall cleanup function is called
[2026-01-08 16:57:21] 2026-01-08 15:56:42,011 | INFO     | --- collectZombieJob: --- 10, [749635]
[2026-01-08 16:57:21] 2026-01-08 15:56:42,011 | INFO     | zombie collector waiting for pid 749635
[2026-01-08 16:57:21] 2026-01-08 15:56:42,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:57:21] 2026-01-08 15:56:42,012 | INFO     | collected zombie processes
[2026-01-08 16:57:21] 2026-01-08 15:56:42,012 | INFO     | will attempt to kill all subprocesses of pid=749635
[2026-01-08 16:57:21] 2026-01-08 15:56:42,054 | INFO     | process IDs to be killed: [749635] (in reverse order)
[2026-01-08 16:57:21] 2026-01-08 15:56:42,073 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:57:21] 2026-01-08 15:56:42,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:57:21] 2026-01-08 15:56:42,074 | INFO     | did not find any defunct processes belonging to 749635
[2026-01-08 16:57:21] 2026-01-08 15:56:42,075 | INFO     | did not find any defunct processes belonging to 749635
[2026-01-08 16:57:21] 2026-01-08 15:56:42,076 | INFO     | ready for new job
[2026-01-08 16:57:21] 2026-01-08 15:56:42,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:57:21] 2026-01-08 15:56:42,076 | INFO     | ***************************************
[2026-01-08 16:57:21] 2026-01-08 15:56:42,077 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:57:21] 2026-01-08 15:56:42,077 | INFO     | ***************************************
[2026-01-08 16:57:21] 2026-01-08 15:56:42,077 | INFO     | 
[2026-01-08 16:57:21] 2026-01-08 15:56:42,077 | INFO     | architecture information:
[2026-01-08 16:57:21] 2026-01-08 15:56:42,077 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:57:21] 2026-01-08 15:56:42,082 | INFO     | cat /etc/os-release:
[2026-01-08 16:57:21] NAME="CentOS Linux"
[2026-01-08 16:57:21] VERSION="7 (Core)"
[2026-01-08 16:57:21] ID="centos"
[2026-01-08 16:57:21] ID_LIKE="rhel fedora"
[2026-01-08 16:57:21] VERSION_ID="7"
[2026-01-08 16:57:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:57:21] ANSI_COLOR="0;31"
[2026-01-08 16:57:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:57:21] HOME_URL="https://www.centos.org/"
[2026-01-08 16:57:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:57:21] 
[2026-01-08 16:57:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:57:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:57:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:57:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:57:21] 
[2026-01-08 16:57:21] 2026-01-08 15:56:42,083 | INFO     | ***************************************
[2026-01-08 16:57:21] 2026-01-08 15:56:42,585 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-08 16:57:21] 2026-01-08 15:56:42,592 | INFO     | sufficient remaining disk space (43888148480 B)
[2026-01-08 16:57:21] 2026-01-08 15:56:42,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:57:21] 2026-01-08 15:56:42,593 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:57:21] 2026-01-08 15:56:42,593 | INFO     | update_server=False
[2026-01-08 16:57:21] 2026-01-08 15:56:42,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:57:21] 2026-01-08 15:56:42,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:57:21] 2026-01-08 15:56:42,637 | INFO     | all payload control threads have been joined
[2026-01-08 16:57:21] 2026-01-08 15:56:42,843 | INFO     | all data control threads have been joined
[2026-01-08 16:57:21] 2026-01-08 15:56:43,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:57:21] 2026-01-08 15:56:43,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:57:21] 2026-01-08 15:56:43,542 | INFO     | aborting loop
[2026-01-08 16:57:21] 2026-01-08 15:56:43,593 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,598 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,638 | INFO     | [payload] control thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,665 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,679 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,824 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,848 | INFO     | [data] control thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,922 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:43,930 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:44,079 | INFO     | all job control threads have been joined
[2026-01-08 16:57:21] 2026-01-08 15:56:44,324 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:44,547 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:45,055 | INFO     | [job] validate thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:45,085 | INFO     | [job] control thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:45,274 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:45,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:57:21] 2026-01-08 15:56:49,819 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:56:53,262 | INFO     | job.realtimelogging is not enabled
[2026-01-08 16:57:21] 2026-01-08 15:56:54,267 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:57:21] 2026-01-08 15:57:13,524 | INFO     | PID=742462 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 16:57:21] 2026-01-08 15:57:13,524 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:57:21] 2026-01-08 15:57:13,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:57:21] 2026-01-08 15:57:13,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:57:21] 2026-01-08 15:57:15,092 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:57:21] 2026-01-08 15:57:16,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303528023872)>', '<ExcThread(monitor, started 140303126214400)>']
[2026-01-08 16:57:21] 2026-01-08 15:57:16,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:57:21] 2026-01-08 15:57:16,540 | INFO     | [monitor] control thread has ended
[2026-01-08 16:57:21] 2026-01-08 15:57:21,542 | INFO     | all workflow threads have been joined
[2026-01-08 16:57:21] 2026-01-08 15:57:21,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:57:21] 2026-01-08 15:57:21,542 | INFO     | traces error code: 0
[2026-01-08 16:57:21] 2026-01-08 15:57:21,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:57:21] 2026-01-08 15:57:21,596 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:57:21] 2026-01-08 15:57:21,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:57:21] 2026-01-08 15:57:21,599 [wrapper] pilotpid: 742462
[2026-01-08 16:57:21] 2026-01-08 15:57:21,600 [wrapper] Pilot exit status: 0
[2026-01-08 16:57:21] 2026-01-08 15:57:21,604 [wrapper] pandaids: 6962915949
[2026-01-08 16:57:21] 2026-01-08 15:57:21,615 [wrapper] cleanup supervisor_pilot  769845 742463
[2026-01-08 16:57:21] 2026-01-08 15:57:21,616 [wrapper] Test setup, not cleaning
[2026-01-08 16:57:21] 2026-01-08 15:57:21,617 [wrapper] apfmon messages muted
[2026-01-08 16:57:21] 2026-01-08 15:57:21,618 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:57:21] 2026-01-08 15:57:21,619 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:57:21]  *** Error codes and diagnostics ***
[2026-01-08 16:57:21]     "exeErrorCode": 0,
[2026-01-08 16:57:21]     "exeErrorDiag": "",
[2026-01-08 16:57:21]     "pilotErrorCode": 0,
[2026-01-08 16:57:21]     "pilotErrorDiag": "",
[2026-01-08 16:57:21]  *** Listing of results directory ***
[2026-01-08 16:57:21] total 445556
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 16:57:21] -rwx------ 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:04 queuedata.json
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc       100 Jan  8 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:57:21] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 13:48 run_atlas
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc       105 Jan  8 13:48 job.xml
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc 223345625 Jan  8 13:48 EVNT.47898824._000439.pool.root.1
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc      6311 Jan  8 13:48 init_data.xml
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:48 start_atlas.sh
[2026-01-08 16:57:21] drwxrwx--x 2 boinc boinc        68 Jan  8 13:48 shared
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc    592395 Jan  8 13:48 input.tar.gz
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc         0 Jan  8 13:48 boinc_lockfile
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc      2518 Jan  8 13:48 pandaJob.out
[2026-01-08 16:57:21] -rw------- 1 boinc boinc    989843 Jan  8 13:48 agis_schedconf.cvmfs.json
[2026-01-08 16:57:21] drwx------ 5 boinc boinc      4096 Jan  8 13:48 pilot3
[2026-01-08 16:57:21] -rw------- 1 boinc boinc 225110799 Jan  8 16:56 HITS.47898826._018537.pool.root.1
[2026-01-08 16:57:21] -rw------- 1 boinc boinc      1029 Jan  8 16:56 memory_monitor_summary.json
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc       530 Jan  8 16:56 boinc_task_state.xml
[2026-01-08 16:57:21] -rw------- 1 boinc boinc   1516240 Jan  8 16:56 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:57:21] -rw------- 1 boinc boinc    355530 Jan  8 16:56 log.47898826._018537.job.log.tgz.1
[2026-01-08 16:57:21] -rw------- 1 boinc boinc      7768 Jan  8 16:56 heartbeat.json
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc        28 Jan  8 16:57 wrapper_checkpoint.txt
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc      8192 Jan  8 16:57 boinc_mmap_file
[2026-01-08 16:57:21] -rw------- 1 boinc boinc        95 Jan  8 16:57 pilot_heartbeat.json
[2026-01-08 16:57:21] -rw------- 1 boinc boinc      4819 Jan  8 16:57 pilotlog.txt
[2026-01-08 16:57:21] -rw------- 1 boinc boinc   1594672 Jan  8 16:57 log.47898826._018537.job.log.1
[2026-01-08 16:57:21] -rw------- 1 boinc boinc       357 Jan  8 16:57 output.list
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc       620 Jan  8 16:57 runtime_log
[2026-01-08 16:57:21] -rw------- 1 boinc boinc   1966080 Jan  8 16:57 result.tar.gz
[2026-01-08 16:57:21] -rw------- 1 boinc boinc       653 Jan  8 16:57 YDtKDm78zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhVjKDmm0i0Hn.diag
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc      8831 Jan  8 16:57 runtime_log.err
[2026-01-08 16:57:21] -rw-r--r-- 1 boinc boinc     21146 Jan  8 16:57 stderr.txt
[2026-01-08 16:57:21] HITS file was successfully produced:
[2026-01-08 16:57:21] -rw------- 1 boinc boinc 225110799 Jan  8 16:56 shared/HITS.pool.root.1
[2026-01-08 16:57:21]  *** Contents of shared directory: ***
[2026-01-08 16:57:21] total 440464
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc 223345625 Jan  8 13:48 ATLAS.root_0
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:48 start_atlas.sh
[2026-01-08 16:57:21] -rw-r--r-- 2 boinc boinc    592395 Jan  8 13:48 input.tar.gz
[2026-01-08 16:57:21] -rw------- 1 boinc boinc 225110799 Jan  8 16:56 HITS.pool.root.1
[2026-01-08 16:57:21] -rw------- 1 boinc boinc   1966080 Jan  8 16:57 result.tar.gz
16:57:23 (738807): run_atlas exited; CPU time 43804.285530
16:57:23 (738807): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN