Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:29 (3710976): wrapper (7.7.26015): starting
09:56:29 (3710976): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 09:56:29] Arguments: --nthreads 9
[2026-01-08 09:56:29] Threads: 9
[2026-01-08 09:56:29] Checking for CVMFS
[2026-01-08 09:56:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 09:56:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 09:56:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 09:56:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 09:56:32] 2.13.3.0 7069 22250 252180 154910 3 252 29361135 40960000 14462 16776704 0 32974107 99.833 44443140 31200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 09:56:32] CVMFS is ok
[2026-01-08 09:56:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 09:56:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 09:56:32] Further information can be found at the LHC@home message board.
[2026-01-08 09:56:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 09:56:32] Checking for apptainer binary...
[2026-01-08 09:56:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 09:56:32] Running /usr/bin/apptainer --version
[2026-01-08 09:56:32] apptainer version 1.4.5-2.el9
[2026-01-08 09:56:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 09:56:53] c-210-35-3.aglt2.org
[2026-01-08 09:56:53] apptainer works
[2026-01-08 09:56:53] Set ATHENA_PROC_NUMBER=9
[2026-01-08 09:56:53] Set ATHENA_CORE_NUMBER=9
[2026-01-08 09:56:53] Starting ATLAS job with PandaID=6962915375
[2026-01-08 09:56:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:05:22]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:05:22] 2026-01-09 00:04:18,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:05:22] 2026-01-09 00:04:18,956 | INFO     | time since job start (32764s) is within the limit (174528.0s)
[2026-01-08 19:05:22] 2026-01-09 00:04:20,963 | INFO     | time since job start (32766s) is within the limit (174528.0s)
[2026-01-08 19:05:22] 2026-01-09 00:04:21,028 | INFO     | monitor loop #1877: job 0:6962915375 is in state 'finished'
[2026-01-08 19:05:22] 2026-01-09 00:04:21,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:05:22] 2026-01-09 00:04:22,970 | INFO     | time since job start (32768s) is within the limit (174528.0s)
[2026-01-08 19:05:22] 2026-01-09 00:04:23,533 | INFO     | monitor loop #1878: job 0:6962915375 is in state 'finished'
[2026-01-08 19:05:22] 2026-01-09 00:04:23,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,705 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 19:05:22] 2026-01-09 00:04:24,709 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2794.8892499999997
[2026-01-08 19:05:22] 2026-01-09 00:04:24,809 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962915375/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,810 | INFO     | extracted standard info from prmon json
[2026-01-08 19:05:22] 2026-01-09 00:04:24,810 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:05:22] 2026-01-09 00:04:24,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:05:22] 2026-01-09 00:04:24,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:05:22] 2026-01-09 00:04:24,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:05:22] 2026-01-09 00:04:24,851 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:05:22] 2026-01-09 00:04:24,871 | INFO     | sum of square deviations: 47219043819.42524
[2026-01-08 19:05:22] 2026-01-09 00:04:24,886 | INFO     | sum of deviations: 205618917059.54663
[2026-01-08 19:05:22] 2026-01-09 00:04:24,886 | INFO     | mean x: 1767900714.0543072
[2026-01-08 19:05:22] 2026-01-09 00:04:24,886 | INFO     | mean y: 2536016.1535580526
[2026-01-08 19:05:22] 2026-01-09 00:04:24,886 | INFO     | intersect: -7695922082.29488
[2026-01-08 19:05:22] 2026-01-09 00:04:24,899 | INFO     | chi2: 4.021133045264806
[2026-01-08 19:05:22] 2026-01-09 00:04:24,900 | INFO     | sum of square deviations: 45905151184.491394
[2026-01-08 19:05:22] 2026-01-09 00:04:24,918 | INFO     | sum of deviations: 235518681224.51776
[2026-01-08 19:05:22] 2026-01-09 00:04:24,918 | INFO     | mean x: 1767900561.557656
[2026-01-08 19:05:22] 2026-01-09 00:04:24,918 | INFO     | mean y: 2539456.933837429
[2026-01-08 19:05:22] 2026-01-09 00:04:24,918 | INFO     | intersect: -9067763070.134438
[2026-01-08 19:05:22] 2026-01-09 00:04:24,931 | INFO     | chi2: 3.3351261154127627
[2026-01-08 19:05:22] 2026-01-09 00:04:24,932 | INFO     | current chi2=3.3351261154127627 (change=17.060040593779142 %)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,932 | INFO     | right removable region: 528
[2026-01-08 19:05:22] 2026-01-09 00:04:24,932 | INFO     | sum of square deviations: 45905035650.49142
[2026-01-08 19:05:22] 2026-01-09 00:04:24,957 | INFO     | sum of deviations: 55747338538.46506
[2026-01-08 19:05:22] 2026-01-09 00:04:24,976 | INFO     | mean x: 1767900866.557656
[2026-01-08 19:05:22] 2026-01-09 00:04:24,976 | INFO     | mean y: 2553389.1814744803
[2026-01-08 19:05:22] 2026-01-09 00:04:24,976 | INFO     | intersect: -2144395561.2738194
[2026-01-08 19:05:22] 2026-01-09 00:04:24,977 | INFO     | chi2: 1.1909499978943674
[2026-01-08 19:05:22] 2026-01-09 00:04:24,977 | INFO     | current chi2=1.1909499978943674 (change=70.38272585144124 %)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,978 | INFO     | sum of square deviations: 44615665107.1653
[2026-01-08 19:05:22] 2026-01-09 00:04:24,989 | INFO     | time since job start (32770s) is within the limit (174528.0s)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,991 | INFO     | sum of deviations: 10422322390.181274
[2026-01-08 19:05:22] 2026-01-09 00:04:24,991 | INFO     | mean x: 1767901019.0591602
[2026-01-08 19:05:22] 2026-01-09 00:04:24,991 | INFO     | mean y: 2558746.639312977
[2026-01-08 19:05:22] 2026-01-09 00:04:24,991 | INFO     | intersect: -410427013.63808817
[2026-01-08 19:05:22] 2026-01-09 00:04:24,992 | INFO     | chi2: 0.9505028354688353
[2026-01-08 19:05:22] 2026-01-09 00:04:24,992 | INFO     | current chi2=0.9505028354688353 (change=20.189526248007837 %)
[2026-01-08 19:05:22] 2026-01-09 00:04:24,992 | INFO     | left removable region: 20
[2026-01-08 19:05:22] 2026-01-09 00:04:24,993 | INFO     | sum of square deviations: 40652359377.72447
[2026-01-08 19:05:22] 2026-01-09 00:04:25,022 | INFO     | sum of deviations: -11612187527.862219
[2026-01-08 19:05:22] 2026-01-09 00:04:25,023 | INFO     | mean x: 1767901141.066929
[2026-01-08 19:05:22] 2026-01-09 00:04:25,023 | INFO     | mean y: 2569056.966535433
[2026-01-08 19:05:22] 2026-01-09 00:04:25,023 | INFO     | intersect: 507563106.3903873
[2026-01-08 19:05:22] 2026-01-09 00:04:25,024 | INFO     | chi2: 0.06111549893302785
[2026-01-08 19:05:22] 2026-01-09 00:04:25,024 | INFO     | current memory leak: -0.29 B/s (using 508 data points, chi2=0.06)
[2026-01-08 19:05:22] 2026-01-09 00:04:25,041 | INFO     | could have reported an average CPU frequency of 2816 MHz (21 samples)
[2026-01-08 19:05:22] 2026-01-09 00:04:25,041 | INFO     | ..............................
[2026-01-08 19:05:22] 2026-01-09 00:04:25,041 | INFO     | . Timing measurements:
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . get job = 0 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . initial setup = 6 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . payload setup = 49 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . stage-in = 0 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . payload execution = 32598 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . stage-out = 7 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | . log creation = 1 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,042 | INFO     | ..............................
[2026-01-08 19:05:22] 2026-01-09 00:04:25,717 | INFO     | 
[2026-01-08 19:05:22] 2026-01-09 00:04:25,717 | INFO     | job summary report
[2026-01-08 19:05:22] 2026-01-09 00:04:25,717 | INFO     | --------------------------------------------------
[2026-01-08 19:05:22] 2026-01-09 00:04:25,717 | INFO     | PanDA job id: 6962915375
[2026-01-08 19:05:22] 2026-01-09 00:04:25,717 | INFO     | task id: 47898826
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | errors: (none)
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | pilot state: finished 
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | transexitcode: 0
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | exeerrorcode: 0
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | exeerrordiag: 
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | exitcode: 0
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | exitmsg: OK
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | cpuconsumptiontime: 60549 s
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | nevents: 400
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | neventsw: 0
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | pid: 3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | pgrp: 3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | corecount: 9
[2026-01-08 19:05:22] 2026-01-09 00:04:25,718 | INFO     | event service: False
[2026-01-08 19:05:22] 2026-01-09 00:04:25,719 | INFO     | sizes: {0: 2283140, 1: 2283996, 2: 2284024, 13: 2284024, 24: 2284080, 35: 2284080, 36: 2284498, 47: 2284526, 32651: 2323149, 32652: 2323176, 32660: 2332230, 32661:
[2026-01-08 19:05:22] 2026-01-09 00:04:25,719 | INFO     | --------------------------------------------------
[2026-01-08 19:05:22] 2026-01-09 00:04:25,719 | INFO     | 
[2026-01-08 19:05:22] 2026-01-09 00:04:25,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 19:05:22] 2026-01-09 00:04:25,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,847 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:05:22] 2026-01-09 00:04:25,849 | INFO     | job 6962915375 has completed (purged errors)
[2026-01-08 19:05:22] 2026-01-09 00:04:25,871 | INFO     | overall cleanup function is called
[2026-01-08 19:05:22] 2026-01-09 00:04:26,899 | INFO     | --- collectZombieJob: --- 10, [3741383]
[2026-01-08 19:05:22] 2026-01-09 00:04:26,899 | INFO     | zombie collector waiting for pid 3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:26,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:05:22] 2026-01-09 00:04:26,899 | INFO     | collected zombie processes
[2026-01-08 19:05:22] 2026-01-09 00:04:26,900 | INFO     | will attempt to kill all subprocesses of pid=3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:27,830 | INFO     | process IDs to be killed: [3741383] (in reverse order)
[2026-01-08 19:05:22] 2026-01-09 00:04:27,937 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:05:22] 2026-01-09 00:04:27,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:05:22] 2026-01-09 00:04:28,014 | INFO     | did not find any defunct processes belonging to 3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:28,128 | INFO     | did not find any defunct processes belonging to 3741383
[2026-01-08 19:05:22] 2026-01-09 00:04:28,128 | INFO     | ready for new job
[2026-01-08 19:05:22] 2026-01-09 00:04:28,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:05:22] 2026-01-09 00:04:28,170 | INFO     | ***************************************
[2026-01-08 19:05:22] 2026-01-09 00:04:28,170 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:05:22] 2026-01-09 00:04:28,170 | INFO     | ***************************************
[2026-01-08 19:05:22] 2026-01-09 00:04:28,170 | INFO     | 
[2026-01-08 19:05:22] 2026-01-09 00:04:28,214 | INFO     | architecture information:
[2026-01-08 19:05:22] 2026-01-09 00:04:28,228 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:05:22] 2026-01-09 00:04:28,473 | INFO     | cat /etc/os-release:
[2026-01-08 19:05:22] NAME="CentOS Linux"
[2026-01-08 19:05:22] VERSION="7 (Core)"
[2026-01-08 19:05:22] ID="centos"
[2026-01-08 19:05:22] ID_LIKE="rhel fedora"
[2026-01-08 19:05:22] VERSION_ID="7"
[2026-01-08 19:05:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:05:22] ANSI_COLOR="0;31"
[2026-01-08 19:05:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:05:22] HOME_URL="https://www.centos.org/"
[2026-01-08 19:05:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:05:22] 
[2026-01-08 19:05:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:05:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:05:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:05:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:05:22] 
[2026-01-08 19:05:22] 2026-01-09 00:04:28,473 | INFO     | ***************************************
[2026-01-08 19:05:22] 2026-01-09 00:04:28,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 19:05:22] 2026-01-09 00:04:29,069 | INFO     | sufficient remaining disk space (74607230976 B)
[2026-01-08 19:05:22] 2026-01-09 00:04:29,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:05:22] 2026-01-09 00:04:29,069 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:05:22] 2026-01-09 00:04:29,069 | INFO     | update_server=False
[2026-01-08 19:05:22] 2026-01-09 00:04:29,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:05:22] 2026-01-09 00:04:29,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:05:22] 2026-01-09 00:04:29,144 | INFO     | all payload control threads have been joined
[2026-01-08 19:05:22] 2026-01-09 00:04:29,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:05:22] 2026-01-09 00:04:29,652 | INFO     | aborting loop
[2026-01-08 19:05:22] 2026-01-09 00:04:29,831 | INFO     | all data control threads have been joined
[2026-01-08 19:05:22] 2026-01-09 00:04:30,076 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,150 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,155 | INFO     | [payload] control thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,547 | INFO     | all job control threads have been joined
[2026-01-08 19:05:22] 2026-01-09 00:04:30,595 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,596 | INFO     | [job] validate thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,654 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,658 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:05:22] 2026-01-09 00:04:30,821 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:30,837 | INFO     | [data] control thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,077 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:05:22] 2026-01-09 00:04:31,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,502 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,553 | INFO     | [job] control thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,622 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:31,720 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:35,327 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:05:22] 2026-01-09 00:04:58,568 | INFO     | PID=3720455 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 19:05:22] 2026-01-09 00:04:58,569 | INFO     | .. there are 15 such processes running
[2026-01-08 19:05:22] 2026-01-09 00:04:58,569 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:05:22] 2026-01-09 00:04:58,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:05:22] 2026-01-09 00:04:58,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:05:22] 2026-01-09 00:05:14,576 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:05:22] 2026-01-09 00:05:15,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115274602304)>', '<ExcThread(monitor, started 140114885850880)>']
[2026-01-08 19:05:22] 2026-01-09 00:05:15,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:05:22] 2026-01-09 00:05:15,672 | INFO     | [monitor] control thread has ended
[2026-01-08 19:05:22] 2026-01-09 00:05:20,198 | INFO     | all workflow threads have been joined
[2026-01-08 19:05:22] 2026-01-09 00:05:20,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:05:22] 2026-01-09 00:05:20,198 | INFO     | traces error code: 0
[2026-01-08 19:05:22] 2026-01-09 00:05:20,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:05:22] 2026-01-09 00:05:21,279 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:05:22] 2026-01-09 00:05:21,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:05:22] 2026-01-09 00:05:21,348 [wrapper] pilotpid: 3720455
[2026-01-08 19:05:22] 2026-01-09 00:05:21,377 [wrapper] Pilot exit status: 0
[2026-01-08 19:05:22] 2026-01-09 00:05:21,532 [wrapper] pandaids: 6962915375
[2026-01-08 19:05:22] 2026-01-09 00:05:22,246 [wrapper] cleanup supervisor_pilot  598442 3720456
[2026-01-08 19:05:22] 2026-01-09 00:05:22,297 [wrapper] Test setup, not cleaning
[2026-01-08 19:05:22] 2026-01-09 00:05:22,307 [wrapper] apfmon messages muted
[2026-01-08 19:05:22] 2026-01-09 00:05:22,323 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:05:22] 2026-01-09 00:05:22,327 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:05:22]  *** Error codes and diagnostics ***
[2026-01-08 19:05:22]     "exeErrorCode": 0,
[2026-01-08 19:05:22]     "exeErrorDiag": "",
[2026-01-08 19:05:22]     "pilotErrorCode": 0,
[2026-01-08 19:05:22]     "pilotErrorDiag": "",
[2026-01-08 19:05:22]  *** Listing of results directory ***
[2026-01-08 19:05:22] total 441604
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 19:05:22] -rwx------. 1 boincer umatlas     36322 Jan  8 03:01 runpilot2-wrapper.sh
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:03 queuedata.json
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas       100 Jan  8 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:05:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 09:56 run_atlas
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas       105 Jan  8 09:56 job.xml
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas 225651267 Jan  8 09:56 EVNT.47898824._000397.pool.root.1
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 09:56 start_atlas.sh
[2026-01-08 19:05:22] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 09:56 shared
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 09:56 input.tar.gz
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas         0 Jan  8 09:56 boinc_lockfile
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 09:56 pandaJob.out
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas        57 Jan  8 09:56 setup.sh.local
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas    989835 Jan  8 09:58 agis_schedconf.cvmfs.json
[2026-01-08 19:05:22] drwx------. 5 boincer umatlas      4096 Jan  8 09:58 pilot3
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas      6843 Jan  8 19:00 init_data.xml
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas 213357751 Jan  8 19:01 HITS.47898826._018117.pool.root.1
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas       531 Jan  8 19:01 boinc_task_state.xml
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas      1043 Jan  8 19:03 memory_monitor_summary.json
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas   1516240 Jan  8 19:03 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas    703009 Jan  8 19:03 log.47898826._018117.job.log.tgz.1
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas        95 Jan  8 19:03 pilot_heartbeat.json
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas      7829 Jan  8 19:04 heartbeat.json
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 19:05 boinc_mmap_file
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas        28 Jan  8 19:05 wrapper_checkpoint.txt
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas      4824 Jan  8 19:05 pilotlog.txt
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas   3933285 Jan  8 19:05 log.47898826._018117.job.log.1
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas       357 Jan  8 19:05 output.list
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas       620 Jan  8 19:05 runtime_log
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas   4659200 Jan  8 19:05 result.tar.gz
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas      9353 Jan  8 19:05 runtime_log.err
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas       660 Jan  8 19:05 HpfKDmv8zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8SjKDmdMb2Bn.diag
[2026-01-08 19:05:22] -rw-r--r--. 1 boincer umatlas     21461 Jan  8 19:05 stderr.txt
[2026-01-08 19:05:22] HITS file was successfully produced:
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas 213357751 Jan  8 19:01 shared/HITS.pool.root.1
[2026-01-08 19:05:22]  *** Contents of shared directory: ***
[2026-01-08 19:05:22] total 433876
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas 225651267 Jan  8 09:56 ATLAS.root_0
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 09:56 start_atlas.sh
[2026-01-08 19:05:22] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 09:56 input.tar.gz
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas 213357751 Jan  8 19:01 HITS.pool.root.1
[2026-01-08 19:05:22] -rw-------. 1 boincer umatlas   4659200 Jan  8 19:05 result.tar.gz
19:05:24 (3710976): run_atlas exited; CPU time 61561.360186
19:05:24 (3710976): called boinc_finish(0)

</stderr_txt>
]]>

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