Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:46 (2263415): wrapper (7.7.26015): starting
07:45:46 (2263415): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 07:45:46] Arguments: --nthreads 8
[2026-01-08 07:45:46] Threads: 8
[2026-01-08 07:45:46] Checking for CVMFS
[2026-01-08 07:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 07:45:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 07:45:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 07:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 07:45:49] 2.13.3.0 10164 20675 150640 154908 3 17 39185462 39288833 7552 16776704 0 8443314 99.605 8156987 37437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 07:45:49] CVMFS is ok
[2026-01-08 07:45:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 07:45:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 07:45:49] Further information can be found at the LHC@home message board.
[2026-01-08 07:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 07:45:49] Checking for apptainer binary...
[2026-01-08 07:45:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 07:45:49] Running /usr/bin/apptainer --version
[2026-01-08 07:45:50] apptainer version 1.4.5-2.el9
[2026-01-08 07:45:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 07:45:50] c-210-14.aglt2.org
[2026-01-08 07:45:50] apptainer works
[2026-01-08 07:45:50] Set ATHENA_PROC_NUMBER=8
[2026-01-08 07:45:50] Set ATHENA_CORE_NUMBER=8
[2026-01-08 07:45:50] Starting ATLAS job with PandaID=6962915071
[2026-01-08 07:45:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:17:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:17:30] 2026-01-09 07:26:08,092 | INFO     | sum of square deviations: 410453685503.8767
[2026-01-09 03:17:30] 2026-01-09 07:26:08,134 | INFO     | PID=2267555 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 03:17:30] 2026-01-09 07:26:08,134 | INFO     | .. there are 8 such processes running
[2026-01-09 03:17:30] 2026-01-09 07:26:08,161 | INFO     | sum of deviations: -390878401888.18274
[2026-01-09 03:17:30] 2026-01-09 07:26:08,161 | INFO     | mean x: 1767910021.7349727
[2026-01-09 03:17:30] 2026-01-09 07:26:08,161 | INFO     | mean y: 2497773.397996357
[2026-01-09 03:17:30] 2026-01-09 07:26:08,161 | INFO     | intersect: 1686092947.1861038
[2026-01-09 03:17:30] 2026-01-09 07:26:08,167 | INFO     | chi2: 10.58117540733884
[2026-01-09 03:17:30] 2026-01-09 07:26:08,169 | INFO     | sum of square deviations: 404872031623.71643
[2026-01-09 03:17:30] 2026-01-09 07:26:08,233 | INFO     | sum of deviations: -7146259612.389481
[2026-01-09 03:17:30] 2026-01-09 07:26:08,233 | INFO     | mean x: 1767909869.240622
[2026-01-09 03:17:30] 2026-01-09 07:26:08,233 | INFO     | mean y: 2508257.2790484903
[2026-01-09 03:17:30] 2026-01-09 07:26:08,234 | INFO     | intersect: 33713037.82719184
[2026-01-09 03:17:30] 2026-01-09 07:26:08,239 | INFO     | chi2: 6.176303514063011
[2026-01-09 03:17:30] 2026-01-09 07:26:08,240 | INFO     | current chi2=6.176303514063011 (change=41.62932494456825 %)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,241 | INFO     | sum of square deviations: 399341215905.9847
[2026-01-09 03:17:30] 2026-01-09 07:26:08,300 | INFO     | sum of deviations: 355343040047.77496
[2026-01-09 03:17:30] 2026-01-09 07:26:08,301 | INFO     | mean x: 1767909716.7463236
[2026-01-09 03:17:30] 2026-01-09 07:26:08,301 | INFO     | mean y: 2518250.7564338236
[2026-01-09 03:17:30] 2026-01-09 07:26:08,301 | INFO     | intersect: -1570608659.9066954
[2026-01-09 03:17:30] 2026-01-09 07:26:08,307 | INFO     | chi2: 2.3372675821475877
[2026-01-09 03:17:30] 2026-01-09 07:26:08,307 | INFO     | current chi2=2.3372675821475877 (change=62.15750121693675 %)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,308 | INFO     | sum of square deviations: 393860939543.6855
[2026-01-09 03:17:30] 2026-01-09 07:26:08,371 | INFO     | sum of deviations: 427059763488.871
[2026-01-09 03:17:30] 2026-01-09 07:26:08,375 | INFO     | mean x: 1767909564.2511542
[2026-01-09 03:17:30] 2026-01-09 07:26:08,375 | INFO     | mean y: 2520238.702677747
[2026-01-09 03:17:30] 2026-01-09 07:26:08,376 | INFO     | intersect: -1914407703.5642881
[2026-01-09 03:17:30] 2026-01-09 07:26:08,377 | INFO     | chi2: 1.5132738343112127
[2026-01-09 03:17:30] 2026-01-09 07:26:08,377 | INFO     | current chi2=1.5132738343112127 (change=35.254574791956514 %)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,379 | INFO     | sum of square deviations: 388431035974.83563
[2026-01-09 03:17:30] 2026-01-09 07:26:08,439 | INFO     | sum of deviations: 425748326312.281
[2026-01-09 03:17:30] 2026-01-09 07:26:08,439 | INFO     | mean x: 1767909411.7560296
[2026-01-09 03:17:30] 2026-01-09 07:26:08,439 | INFO     | mean y: 2520201.8413729127
[2026-01-09 03:17:30] 2026-01-09 07:26:08,440 | INFO     | intersect: -1935235547.3558185
[2026-01-09 03:17:30] 2026-01-09 07:26:08,445 | INFO     | chi2: 1.5129593468501252
[2026-01-09 03:17:30] 2026-01-09 07:26:08,445 | INFO     | current chi2=1.5129593468501252 (change=0.02078192683682816 %)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,446 | INFO     | right removable region: 1077
[2026-01-09 03:17:30] 2026-01-09 07:26:08,447 | INFO     | sum of square deviations: 404871204463.71625
[2026-01-09 03:17:30] 2026-01-09 07:26:08,510 | INFO     | sum of deviations: -557533106488.1838
[2026-01-09 03:17:30] 2026-01-09 07:26:08,510 | INFO     | mean x: 1767910174.240622
[2026-01-09 03:17:30] 2026-01-09 07:26:08,510 | INFO     | mean y: 2502316.152790485
[2026-01-09 03:17:30] 2026-01-09 07:26:08,511 | INFO     | intersect: 2437025790.703261
[2026-01-09 03:17:30] 2026-01-09 07:26:08,516 | INFO     | chi2: 9.181528685944501
[2026-01-09 03:17:30] 2026-01-09 07:26:08,516 | INFO     | current chi2=9.181528685944501 (change=13.227705500691147 %)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,516 | INFO     | left removable region: 10
[2026-01-09 03:17:30] 2026-01-09 07:26:08,518 | INFO     | sum of square deviations: 376660169283.93976
[2026-01-09 03:17:30] 2026-01-09 07:26:08,581 | INFO     | sum of deviations: 240650644661.38052
[2026-01-09 03:17:30] 2026-01-09 07:26:08,581 | INFO     | mean x: 1767909686.2652297
[2026-01-09 03:17:30] 2026-01-09 07:26:08,581 | INFO     | mean y: 2525425.161199625
[2026-01-09 03:17:30] 2026-01-09 07:26:08,581 | INFO     | intersect: -1127003631.5257268
[2026-01-09 03:17:30] 2026-01-09 07:26:08,583 | INFO     | chi2: 0.058698823813337936
[2026-01-09 03:17:30] 2026-01-09 07:26:08,587 | INFO     | current memory leak: 0.64 B/s (using 1067 data points, chi2=0.06)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | could have reported an average CPU frequency of 2600 MHz (40 samples)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | ..............................
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | . Timing measurements:
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | . get job = 0 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | . initial setup = 7 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | . payload setup = 44 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,589 | INFO     | . stage-in = 0 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,590 | INFO     | . payload execution = 66983 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,590 | INFO     | . stage-out = 4 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,590 | INFO     | . log creation = 0 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,590 | INFO     | ..............................
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | 
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | job summary report
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | --------------------------------------------------
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | PanDA job id: 6962915071
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | task id: 47898826
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | errors: (none)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | pilot state: finished 
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | transexitcode: 0
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | exeerrorcode: 0
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | exeerrordiag: 
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | exitcode: 0
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | exitmsg: OK
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | cpuconsumptiontime: 74663 s
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | nevents: 400
[2026-01-09 03:17:30] 2026-01-09 07:26:08,868 | INFO     | neventsw: 0
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | pid: 2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | pgrp: 2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | corecount: 8
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | event service: False
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2284024, 3: 2284052, 14: 2284052, 25: 2284080, 35: 2284526, 67033: 2339061, 67034: 2339060, 67039: 2348170, 67076: 2348308}
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | --------------------------------------------------
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | 
[2026-01-09 03:17:30] 2026-01-09 07:26:08,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 03:17:30] 2026-01-09 07:26:08,920 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | job 6962915071 has completed (purged errors)
[2026-01-09 03:17:30] 2026-01-09 07:26:08,923 | INFO     | overall cleanup function is called
[2026-01-09 03:17:30] 2026-01-09 07:26:09,937 | INFO     | --- collectZombieJob: --- 10, [2277327]
[2026-01-09 03:17:30] 2026-01-09 07:26:09,937 | INFO     | zombie collector waiting for pid 2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:09,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:17:30] 2026-01-09 07:26:09,938 | INFO     | collected zombie processes
[2026-01-09 03:17:30] 2026-01-09 07:26:09,938 | INFO     | will attempt to kill all subprocesses of pid=2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:10,679 | INFO     | process IDs to be killed: [2277327] (in reverse order)
[2026-01-09 03:17:30] 2026-01-09 07:26:10,768 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:17:30] 2026-01-09 07:26:10,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:17:30] 2026-01-09 07:26:10,782 | INFO     | did not find any defunct processes belonging to 2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:10,806 | INFO     | did not find any defunct processes belonging to 2277327
[2026-01-09 03:17:30] 2026-01-09 07:26:10,806 | INFO     | ready for new job
[2026-01-09 03:17:30] 2026-01-09 07:26:10,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:17:30] 2026-01-09 07:26:10,819 | INFO     | ***************************************
[2026-01-09 03:17:30] 2026-01-09 07:26:10,820 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:17:30] 2026-01-09 07:26:10,820 | INFO     | ***************************************
[2026-01-09 03:17:30] 2026-01-09 07:26:10,824 | INFO     | 
[2026-01-09 03:17:30] 2026-01-09 07:26:10,826 | INFO     | architecture information:
[2026-01-09 03:17:30] 2026-01-09 07:26:10,827 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:17:30] 2026-01-09 07:26:10,868 | INFO     | cat /etc/os-release:
[2026-01-09 03:17:30] NAME="CentOS Linux"
[2026-01-09 03:17:30] VERSION="7 (Core)"
[2026-01-09 03:17:30] ID="centos"
[2026-01-09 03:17:30] ID_LIKE="rhel fedora"
[2026-01-09 03:17:30] VERSION_ID="7"
[2026-01-09 03:17:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:17:30] ANSI_COLOR="0;31"
[2026-01-09 03:17:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:17:30] HOME_URL="https://www.centos.org/"
[2026-01-09 03:17:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:17:30] 
[2026-01-09 03:17:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:17:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:17:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:17:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:17:30] 
[2026-01-09 03:17:30] 2026-01-09 07:26:10,869 | INFO     | ***************************************
[2026-01-09 03:17:30] 2026-01-09 07:26:11,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 03:17:30] 2026-01-09 07:26:11,425 | INFO     | sufficient remaining disk space (52268367872 B)
[2026-01-09 03:17:30] 2026-01-09 07:26:11,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:17:30] 2026-01-09 07:26:11,426 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:17:30] 2026-01-09 07:26:11,426 | INFO     | update_server=False
[2026-01-09 03:17:30] 2026-01-09 07:26:11,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:17:30] 2026-01-09 07:26:11,515 | INFO     | all job control threads have been joined
[2026-01-09 03:17:30] 2026-01-09 07:26:11,615 | INFO     | all payload control threads have been joined
[2026-01-09 03:17:30] 2026-01-09 07:26:11,906 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 03:17:30] 2026-01-09 07:26:11,906 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 03:17:30] 2026-01-09 07:26:11,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:17:30] 2026-01-09 07:26:11,907 | INFO     | will abort loop
[2026-01-09 03:17:30] 2026-01-09 07:26:12,014 | INFO     | all data control threads have been joined
[2026-01-09 03:17:30] 2026-01-09 07:26:12,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:17:30] 2026-01-09 07:26:12,434 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,510 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,522 | INFO     | [job] control thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,620 | INFO     | [payload] control thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,681 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,810 | INFO     | [job] validate thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,865 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:12,952 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,020 | INFO     | [data] control thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,052 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,682 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,804 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:13,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:17:30] 2026-01-09 07:26:14,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:17:30] 2026-01-09 07:26:14,315 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:14,907 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:18,322 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:17:30] 2026-01-09 07:26:42,050 | INFO     | PID=2267555 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 03:17:30] 2026-01-09 07:26:42,051 | INFO     | .. there are 8 such processes running
[2026-01-09 03:17:30] 2026-01-09 07:26:42,051 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:17:30] 2026-01-09 07:26:42,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:17:30] 2026-01-09 07:26:42,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:17:30] 2026-01-09 07:27:05,874 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:17:30] 2026-01-09 07:27:07,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082024630080)>', '<ExcThread(monitor, started 140081482422016)>']
[2026-01-09 03:17:30] 2026-01-09 07:27:07,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:17:30] 2026-01-09 07:27:07,272 | INFO     | [monitor] control thread has ended
[2026-01-09 03:17:30] 2026-01-09 07:27:12,143 | INFO     | all workflow threads have been joined
[2026-01-09 03:17:30] 2026-01-09 07:27:12,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:17:30] 2026-01-09 07:27:12,144 | INFO     | traces error code: 0
[2026-01-09 03:17:30] 2026-01-09 07:27:12,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:17:30] 2026-01-09 07:27:13,021 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:17:30] 2026-01-09 07:27:13,067 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:17:30] 2026-01-09 07:27:13,122 [wrapper] pilotpid: 2267555
[2026-01-09 03:17:30] 2026-01-09 07:27:13,155 [wrapper] Pilot exit status: 0
[2026-01-09 03:17:30] 2026-01-09 07:27:13,397 [wrapper] pandaids: 6962915071
[2026-01-09 03:17:30] 2026-01-09 07:27:13,501 [wrapper] cleanup supervisor_pilot 3956911 2267556
[2026-01-09 03:17:30] 2026-01-09 07:27:13,504 [wrapper] Test setup, not cleaning
[2026-01-09 03:17:30] 2026-01-09 07:27:13,506 [wrapper] apfmon messages muted
[2026-01-09 03:17:30] 2026-01-09 07:27:13,509 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:17:30] 2026-01-09 07:27:13,511 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:17:30]  *** Error codes and diagnostics ***
[2026-01-09 03:17:30]     "exeErrorCode": 0,
[2026-01-09 03:17:30]     "exeErrorDiag": "",
[2026-01-09 03:17:30]     "pilotErrorCode": 0,
[2026-01-09 03:17:30]     "pilotErrorDiag": "",
[2026-01-09 03:17:30]  *** Listing of results directory ***
[2026-01-09 03:17:30] total 456248
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 03:17:30] -rwx------. 1 boincer umatlas     36322 Jan  8 03:01 runpilot2-wrapper.sh
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:01 queuedata.json
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas       100 Jan  8 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:17:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 07:45 run_atlas
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas       105 Jan  8 07:45 job.xml
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas 222336602 Jan  8 07:45 EVNT.47898824._000394.pool.root.1
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 07:45 start_atlas.sh
[2026-01-09 03:17:30] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 07:45 shared
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 07:45 input.tar.gz
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas         0 Jan  8 07:45 boinc_lockfile
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 07:45 pandaJob.out
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas        57 Jan  8 07:45 setup.sh.local
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas    989843 Jan  8 07:46 agis_schedconf.cvmfs.json
[2026-01-09 03:17:30] drwx------. 5 boincer umatlas      4096 Jan  8 07:46 pilot3
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas 222711243 Jan  9 02:13 HITS.47898826._018036.pool.root.1
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas       531 Jan  9 02:14 boinc_task_state.xml
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas      1052 Jan  9 02:25 memory_monitor_summary.json
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas   1516240 Jan  9 02:25 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas   1095033 Jan  9 02:25 log.47898826._018036.job.log.tgz.1
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas        95 Jan  9 02:25 pilot_heartbeat.json
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas      7824 Jan  9 02:26 heartbeat.json
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas      5009 Jan  9 02:27 pilotlog.txt
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas   8022315 Jan  9 02:27 log.47898826._018036.job.log.1
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas       357 Jan  9 02:27 output.list
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas       620 Jan  9 02:27 runtime_log
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas   9134080 Jan  9 02:27 result.tar.gz
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 02:27 runtime_log.err
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas       659 Jan  9 02:27 R3KNDmU8zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtRjKDml6Orbm.diag
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas      6660 Jan  9 03:10 init_data.xml
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 03:17 boinc_mmap_file
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas        28 Jan  9 03:17 wrapper_checkpoint.txt
[2026-01-09 03:17:30] -rw-r--r--. 1 boincer umatlas     21206 Jan  9 03:17 stderr.txt
[2026-01-09 03:17:30] HITS file was successfully produced:
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas 222711243 Jan  9 02:13 shared/HITS.pool.root.1
[2026-01-09 03:17:30]  *** Contents of shared directory: ***
[2026-01-09 03:17:30] total 444144
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas 222336602 Jan  8 07:45 ATLAS.root_0
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 07:45 start_atlas.sh
[2026-01-09 03:17:30] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 07:45 input.tar.gz
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas 222711243 Jan  9 02:13 HITS.pool.root.1
[2026-01-09 03:17:30] -rw-------. 1 boincer umatlas   9134080 Jan  9 02:27 result.tar.gz
03:17:32 (2263415): run_atlas exited; CPU time 76478.530114
03:17:32 (2263415): called boinc_finish(0)

</stderr_txt>
]]>

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