Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 11:14:24 (10900): vboxwrapper version 26210
2026-01-08 11:14:24 (10900): BOINC client version: 8.2.4
2026-01-08 11:14:24 (10900): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-08 11:14:24 (10900): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 11:14:25 (10900): Create VM. (boinc_43efffb7edbe3385, slot#1)
2026-01-08 11:14:25 (10900): Setting Memory Size for VM. (4400MB)
2026-01-08 11:14:25 (10900): Setting CPU Count for VM. (4)
2026-01-08 11:14:26 (10900): Setting Chipset Options for VM.
2026-01-08 11:14:26 (10900): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 11:14:26 (10900): Setting Boot Options for VM.
2026-01-08 11:14:27 (10900): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 11:14:27 (10900): Enabling VM Network Access.
2026-01-08 11:14:27 (10900): Disabling USB Support for VM.
2026-01-08 11:14:28 (10900): Disabling COM Port Support for VM.
2026-01-08 11:14:28 (10900): Disabling LPT Port Support for VM.
2026-01-08 11:14:28 (10900): Disabling Audio Support for VM.
2026-01-08 11:14:28 (10900): Disabling Clipboard Support for VM.
2026-01-08 11:14:29 (10900): Disabling Drag and Drop Support for VM.
2026-01-08 11:14:29 (10900): Adding storage controller(s) to VM.
2026-01-08 11:14:29 (10900): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 11:14:31 (10900): Adding VirtualBox Guest Additions to VM.
2026-01-08 11:14:31 (10900): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 11:14:32 (10900): forwarding host port 58234 to guest port 80
2026-01-08 11:14:32 (10900): Enabling remote desktop for VM.
2026-01-08 11:14:32 (10900): Required extension pack not installed, remote desktop not enabled.
2026-01-08 11:14:32 (10900): Enabling shared directory for VM.
2026-01-08 11:14:33 (10900): Starting VM using VBoxManage interface. (boinc_43efffb7edbe3385, slot#1)
2026-01-08 11:14:41 (10900): Successfully started VM. (PID = '1672')
2026-01-08 11:14:41 (10900): Reporting VM Process ID to BOINC.
2026-01-08 11:14:41 (10900): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-08 11:14:41 (10900): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 11:14:41 (10900): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 11:14:41 (10900): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 11:14:41 (10900): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 11:14:41 (10900): Detected: Web Application Enabled (http://localhost:58234)
2026-01-08 11:14:41 (10900): Preference change detected
2026-01-08 11:14:41 (10900): Setting CPU throttle for VM. (100%)
2026-01-08 11:14:41 (10900): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 11:14:43 (10900): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 11:14:43 (10900): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 11:14:46 (10900): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 11:14:46 (10900): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 11:14:46 (10900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 11:14:54 (10900): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 11:14:54 (10900): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 11:15:05 (10900): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000243 main     Log opened 2026-01-08T11:15:02.778175000Z
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000447 main     OS Product: Linux
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000517 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000576 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000629 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000631 main     Process ID: 1314
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.000631 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 11:15:05 (10900): Guest Log: 00:00:00.002347 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 11:15:05 (10900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 11:15:05 (10900): Guest Log: [INFO] Mounting shared directory
2026-01-08 11:15:05 (10900): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 11:15:13 (10900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 11:15:13 (10900): Guest Log: [INFO] Detected branch: prod
2026-01-08 11:15:13 (10900): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 11:15:13 (10900): Guest Log: Copying input files
2026-01-08 11:15:15 (10900): Guest Log: 00:00:10.006221 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 609 612 388 000ns (GuestNow=1 767 892 512 395 228 000 ns GuestLast=1 767 870 902 782 840 000 ns fSetTimeLastLoop=true )
2026-01-08 11:15:15 (10900): Guest Log: Copied input files into RunAtlas.
2026-01-08 11:15:15 (10900): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 11:15:15 (10900): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 11:15:15 (10900): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 11:15:15 (10900): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 11:15:24 (10900): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 11:15:25 (10900): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 11:15:25 (10900): Guest Log: 2.6.3.0 1607 0 32052 154915 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 11:15:26 (10900): Guest Log: copied the webapp to /var/www
2026-01-08 11:15:26 (10900): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-08 11:15:26 (10900): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-08 11:15:26 (10900): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 11:15:26 (10900): Guest Log:  *** Starting ATLAS job. (PandaID=6962915453 taskID=47898826) ***
2026-01-08 12:54:43 (10900): Status Report: Elapsed Time: '6000.000000'
2026-01-08 12:54:43 (10900): Status Report: CPU Time: '21358.046875'
2026-01-08 14:00:08 (10900): VM state change detected. (old = 'running', new = 'paused')
2026-01-08 14:38:11 (10900): VM state change detected. (old = 'paused', new = 'running')
2026-01-08 14:38:19 (10900): Guest Log: 02:45:07.438496 timesync vgsvcTimeSyncWorker: Radical host time change: 2 287 367 000 000ns (HostNow=1 767 904 677 590 000 000 ns HostLast=1 767 902 390 223 000 000 ns)
2026-01-08 14:38:29 (10900): Guest Log: 02:45:17.440636 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 277 765 105 000ns (GuestNow=1 767 904 687 592 395 000 ns GuestLast=1 767 902 409 827 290 000 ns fSetTimeLastLoop=true )
2026-01-08 15:12:49 (10900): Status Report: Elapsed Time: '12000.000000'
2026-01-08 15:12:49 (10900): Status Report: CPU Time: '44778.062500'
2026-01-08 16:52:51 (10900): Status Report: Elapsed Time: '18000.000000'
2026-01-08 16:52:51 (10900): Status Report: CPU Time: '68282.421875'
2026-01-08 18:32:53 (10900): Status Report: Elapsed Time: '24000.000000'
2026-01-08 18:32:53 (10900): Status Report: CPU Time: '91690.375000'
2026-01-08 18:44:32 (10900): Guest Log:  *** Job finished ***
2026-01-08 18:44:32 (10900): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:43:56,523 | INFO     | all workflow threads have been joined
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:43:56,523 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:43:56,524 | INFO     | traces error code: 0
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:43:56,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,299 | INFO     | PID=6005 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,301 | INFO     | found 0 job(s) in 20 queues
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,302 | INFO     | [monitor] control thread has ended
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,568 [wrapper] ==== pilot stdout END ====
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,580 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,592 [wrapper] pilotpid: 6005
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,603 [wrapper] Pilot exit status: 0
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,743 [wrapper] pandaids: 6962915453
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,810 [wrapper] cleanup supervisor_pilot 31727 6006
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,841 [wrapper] Test setup, not cleaning
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,853 [wrapper] apfmon messages muted
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,869 [wrapper] ==== wrapper stdout END ====
2026-01-08 18:44:32 (10900): Guest Log: 2026-01-09 00:44:07,883 [wrapper] ==== wrapper stderr END ====
2026-01-08 18:44:32 (10900): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 18:44:32 (10900): Guest Log:     "exeErrorCode": 0,
2026-01-08 18:44:32 (10900): Guest Log:     "exeErrorDiag": "",
2026-01-08 18:44:32 (10900): Guest Log:     "pilotErrorCode": 0,
2026-01-08 18:44:32 (10900): Guest Log:     "pilotErrorDiag": "",
2026-01-08 18:44:32 (10900): Guest Log:  *** Listing of results directory ***
2026-01-08 18:44:32 (10900): Guest Log: total 226916
2026-01-08 18:44:32 (10900): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 07:56 pilot3.tar.gz
2026-01-08 18:44:32 (10900): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 08:01 runpilot2-wrapper.sh
2026-01-08 18:44:32 (10900): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 08:03 queuedata.json
2026-01-08 18:44:32 (10900): Guest Log: -rwxr-xr-x. 1 atlas atlas      8571 Jan  8 17:15 init_data.xml
2026-01-08 18:44:32 (10900): Guest Log: -rwxr-xr-x. 1 atlas atlas    592394 Jan  8 17:15 input.tar.gz
2026-01-08 18:44:32 (10900): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 17:15 start_atlas.sh
2026-01-08 18:44:32 (10900): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 17:15 EVNT.47898824._000400.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 18:44:32 (10900): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan  8 17:15 pandaJob.out
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas    989837 Jan  8 17:16 agis_schedconf.cvmfs.json
2026-01-08 18:44:32 (10900): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 17:16 pilot3
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas 221026105 Jan  9 00:42 HITS.47898826._018195.pool.root.1
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas      1036 Jan  9 00:43 memory_monitor_summary.json
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas        97 Jan  9 00:43 pilot_heartbeat.json
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 00:43 agis_ddmendpoints.agis.ALL.json
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas    542943 Jan  9 00:43 log.47898826._018195.job.log.tgz.1
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas      7804 Jan  9 00:43 heartbeat.json
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas       744 Jan  9 00:44 pilotlog.txt
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas   3204613 Jan  9 00:44 log.47898826._018195.job.log.1
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 00:44 output.list
2026-01-08 18:44:32 (10900): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 00:44 runtime_log
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas   3768320 Jan  9 00:44 result.tar.gz
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas       653 Jan  9 00:44 UdqLDmv8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqKeKDmTCEHgm.diag
2026-01-08 18:44:32 (10900): Guest Log: -rw-r--r--. 1 atlas atlas      8725 Jan  9 00:44 runtime_log.err
2026-01-08 18:44:32 (10900): Guest Log: Looking for outputfile HITS.47898826._018195.pool.root.1
2026-01-08 18:44:32 (10900): Guest Log: HITS file was successfully produced
2026-01-08 18:44:32 (10900): Guest Log: -rw-------. 1 atlas atlas 221026105 Jan  9 00:42 /home/atlas/RunAtlas/HITS.47898826._018195.pool.root.1
2026-01-08 18:44:34 (10900): Guest Log: Successfully finished the ATLAS job!
2026-01-08 18:44:34 (10900): Guest Log: Copying the results back to the shared directory!
2026-01-08 18:44:35 (10900): Guest Log:  *** Contents of shared directory: ***
2026-01-08 18:44:35 (10900): Guest Log: total 442176
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root 227366877 Jan  8 17:14 ATLAS.root_0
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root 221026105 Jan  9  2026 HITS.pool.root.1
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root      8571 Jan  8 17:14 init_data.xml
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root    592394 Jan  8 12:41 input.tar.gz
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root   3768320 Jan  9  2026 result.tar.gz
2026-01-08 18:44:35 (10900): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 12:41 start_atlas.sh
2026-01-08 18:44:35 (10900): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 18:44:35 (10900): VM Completion File Detected.
2026-01-08 18:44:35 (10900): Powering off VM.
2026-01-08 18:44:36 (10900): Successfully stopped VM.
2026-01-08 18:44:36 (10900): Deregistering VM. (boinc_43efffb7edbe3385, slot#1)
2026-01-08 18:44:36 (10900): Removing network bandwidth throttle group from VM.
2026-01-08 18:44:36 (10900): Removing VM from VirtualBox.
2026-01-08 18:44:42 (10900): called boinc_finish(0)

</stderr_txt>
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