Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:08 (29991): wrapper (7.7.26015): starting
21:52:08 (29991): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:52:08] Arguments: --nthreads 8
[2026-01-08 21:52:08] Threads: 8
[2026-01-08 21:52:08] Checking for CVMFS
[2026-01-08 21:52:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:52:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:52:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:52:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:52:11] 2.11.2.0 4684 34480 102728 154919 3 61 17718182 25165824 96 130560 0 16122154 99.809 10197610 3995 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 21:52:11] CVMFS is ok
[2026-01-08 21:52:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:52:11] Checking for apptainer binary...
[2026-01-08 21:52:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:52:11] Running /usr/bin/apptainer --version
[2026-01-08 21:52:12] apptainer version 1.3.2-1.el7
[2026-01-08 21:52:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:52:41] cg-vwn471.simple-grid.lan
[2026-01-08 21:52:41] apptainer works
[2026-01-08 21:52:41] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:52:41] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:52:41] Starting ATLAS job with PandaID=6962914970
[2026-01-08 21:52:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:49:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:49:50] 2026-01-09 02:48:45,592 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 03:49:50] 2026-01-09 02:48:45,594 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6962914970/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,595 | INFO     | extracted standard info from prmon json
[2026-01-09 03:49:50] 2026-01-09 02:48:45,595 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:49:50] 2026-01-09 02:48:45,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:49:50] 2026-01-09 02:48:45,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:49:50] 2026-01-09 02:48:45,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:49:50] 2026-01-09 02:48:45,602 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:49:50] 2026-01-09 02:48:45,603 | INFO     | sum of square deviations: 11657595320.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,607 | INFO     | sum of deviations: 198581952667.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,607 | INFO     | mean x: 1767916552.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,607 | INFO     | mean y: 2437601.647761194
[2026-01-09 03:49:50] 2026-01-09 02:48:45,607 | INFO     | intersect: -30113234748.562958
[2026-01-09 03:49:50] 2026-01-09 02:48:45,611 | INFO     | chi2: 8.602284316831213
[2026-01-09 03:49:50] 2026-01-09 02:48:45,612 | INFO     | sum of square deviations: 11143362422.5
[2026-01-09 03:49:50] 2026-01-09 02:48:45,616 | INFO     | sum of deviations: 217823615248.50006
[2026-01-09 03:49:50] 2026-01-09 02:48:45,616 | INFO     | mean x: 1767916399.5
[2026-01-09 03:49:50] 2026-01-09 02:48:45,616 | INFO     | mean y: 2443226.6333333333
[2026-01-09 03:49:50] 2026-01-09 02:48:45,616 | INFO     | intersect: -34555702420.55869
[2026-01-09 03:49:50] 2026-01-09 02:48:45,617 | INFO     | chi2: 7.8590185176027925
[2026-01-09 03:49:50] 2026-01-09 02:48:45,617 | INFO     | current chi2=7.8590185176027925 (change=8.640330543064568 %)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,617 | INFO     | right removable region: 329
[2026-01-09 03:49:50] 2026-01-09 02:48:45,618 | INFO     | sum of square deviations: 11143362422.5
[2026-01-09 03:49:50] 2026-01-09 02:48:45,621 | INFO     | sum of deviations: 81035576514.00002
[2026-01-09 03:49:50] 2026-01-09 02:48:45,622 | INFO     | mean x: 1767916704.5
[2026-01-09 03:49:50] 2026-01-09 02:48:45,622 | INFO     | mean y: 2472445.6
[2026-01-09 03:49:50] 2026-01-09 02:48:45,622 | INFO     | intersect: -12853983617.30416
[2026-01-09 03:49:50] 2026-01-09 02:48:45,622 | INFO     | chi2: 3.667809285879242
[2026-01-09 03:49:50] 2026-01-09 02:48:45,623 | INFO     | current chi2=3.667809285879242 (change=57.362380144738836 %)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,623 | INFO     | sum of square deviations: 10644478650.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,630 | INFO     | sum of deviations: -6765527873.000004
[2026-01-09 03:49:50] 2026-01-09 02:48:45,630 | INFO     | mean x: 1767916857.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,630 | INFO     | mean y: 2499254.6523076924
[2026-01-09 03:49:50] 2026-01-09 02:48:45,631 | INFO     | intersect: 1126170142.29884
[2026-01-09 03:49:50] 2026-01-09 02:48:45,631 | INFO     | chi2: 1.0585341336975218
[2026-01-09 03:49:50] 2026-01-09 02:48:45,631 | INFO     | current chi2=1.0585341336975218 (change=71.13988075190308 %)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,632 | INFO     | sum of square deviations: 10160711440.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,635 | INFO     | sum of deviations: -30914803416.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,636 | INFO     | mean x: 1767917009.5
[2026-01-09 03:49:50] 2026-01-09 02:48:45,636 | INFO     | mean y: 2506842.69375
[2026-01-09 03:49:50] 2026-01-09 02:48:45,636 | INFO     | intersect: 5381540301.840495
[2026-01-09 03:49:50] 2026-01-09 02:48:45,637 | INFO     | chi2: 0.8324317383503741
[2026-01-09 03:49:50] 2026-01-09 02:48:45,637 | INFO     | current chi2=0.8324317383503741 (change=21.35995317953128 %)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,637 | INFO     | left removable region: 30
[2026-01-09 03:49:50] 2026-01-09 02:48:45,637 | INFO     | sum of square deviations: 8288713550.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,641 | INFO     | sum of deviations: -9303514917.999996
[2026-01-09 03:49:50] 2026-01-09 02:48:45,641 | INFO     | mean x: 1767917284.0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,641 | INFO     | mean y: 2513826.9598662206
[2026-01-09 03:49:50] 2026-01-09 02:48:45,641 | INFO     | intersect: 1986880245.9784167
[2026-01-09 03:49:50] 2026-01-09 02:48:45,642 | INFO     | chi2: 0.019012554527634427
[2026-01-09 03:49:50] 2026-01-09 02:48:45,642 | INFO     | current memory leak: -1.12 B/s (using 299 data points, chi2=0.02)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | ..............................
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | . Timing measurements:
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | . get job = 0 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | . initial setup = 12 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,646 | INFO     | . payload setup = 159 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,647 | INFO     | . stage-in = 0 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,647 | INFO     | . payload execution = 20600 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,647 | INFO     | . stage-out = 5 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,647 | INFO     | . log creation = 1 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,647 | INFO     | ..............................
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | 
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | job summary report
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | --------------------------------------------------
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | PanDA job id: 6962914970
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | task id: 47898826
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | errors: (none)
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:49:50] 2026-01-09 02:48:45,768 | INFO     | pilot state: finished 
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | transexitcode: 0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | exeerrorcode: 0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | exeerrordiag: 
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | exitcode: 0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | exitmsg: OK
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | cpuconsumptiontime: 77378 s
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | nevents: 400
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | neventsw: 0
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | pid: 7897
[2026-01-09 03:49:50] 2026-01-09 02:48:45,769 | INFO     | pgrp: 7897
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | corecount: 8
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | event service: False
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | --------------------------------------------------
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | 
[2026-01-09 03:49:50] 2026-01-09 02:48:45,770 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 03:49:50] 2026-01-09 02:48:46,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:49:50] 2026-01-09 02:48:46,267 | INFO     | job 6962914970 has completed (purged errors)
[2026-01-09 03:49:50] 2026-01-09 02:48:46,267 | INFO     | overall cleanup function is called
[2026-01-09 03:49:50] 2026-01-09 02:48:47,276 | INFO     | --- collectZombieJob: --- 10, [7897]
[2026-01-09 03:49:50] 2026-01-09 02:48:47,276 | INFO     | zombie collector waiting for pid 7897
[2026-01-09 03:49:50] 2026-01-09 02:48:47,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:49:50] 2026-01-09 02:48:47,276 | INFO     | collected zombie processes
[2026-01-09 03:49:50] 2026-01-09 02:48:47,276 | INFO     | will attempt to kill all subprocesses of pid=7897
[2026-01-09 03:49:50] 2026-01-09 02:48:47,359 | INFO     | process IDs to be killed: [7897] (in reverse order)
[2026-01-09 03:49:50] 2026-01-09 02:48:48,268 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:49:50] 2026-01-09 02:48:48,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:49:50] 2026-01-09 02:48:48,270 | INFO     | did not find any defunct processes belonging to 7897
[2026-01-09 03:49:50] 2026-01-09 02:48:48,272 | INFO     | did not find any defunct processes belonging to 7897
[2026-01-09 03:49:50] 2026-01-09 02:48:48,272 | INFO     | ready for new job
[2026-01-09 03:49:50] 2026-01-09 02:48:48,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:49:50] 2026-01-09 02:48:48,275 | INFO     | ***************************************
[2026-01-09 03:49:50] 2026-01-09 02:48:48,275 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:49:50] 2026-01-09 02:48:48,275 | INFO     | ***************************************
[2026-01-09 03:49:50] 2026-01-09 02:48:48,275 | INFO     | 
[2026-01-09 03:49:50] 2026-01-09 02:48:48,276 | INFO     | pilot is running in a VM
[2026-01-09 03:49:50] 2026-01-09 02:48:48,276 | INFO     | architecture information:
[2026-01-09 03:49:50] 2026-01-09 02:48:48,288 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:49:50] 2026-01-09 02:48:48,544 | INFO     | cat /etc/os-release:
[2026-01-09 03:49:50] NAME="CentOS Linux"
[2026-01-09 03:49:50] VERSION="7 (Core)"
[2026-01-09 03:49:50] ID="centos"
[2026-01-09 03:49:50] ID_LIKE="rhel fedora"
[2026-01-09 03:49:50] VERSION_ID="7"
[2026-01-09 03:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:49:50] ANSI_COLOR="0;31"
[2026-01-09 03:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:49:50] HOME_URL="https://www.centos.org/"
[2026-01-09 03:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:49:50] 
[2026-01-09 03:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:49:50] 
[2026-01-09 03:49:50] 2026-01-09 02:48:48,544 | INFO     | ***************************************
[2026-01-09 03:49:50] 2026-01-09 02:48:49,048 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 03:49:50] 2026-01-09 02:48:49,241 | INFO     | sufficient remaining disk space (497116250112 B)
[2026-01-09 03:49:50] 2026-01-09 02:48:49,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:49:50] 2026-01-09 02:48:49,241 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:49:50] 2026-01-09 02:48:49,241 | INFO     | update_server=False
[2026-01-09 03:49:50] 2026-01-09 02:48:49,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:49:50] 2026-01-09 02:48:49,410 | INFO     | all data control threads have been joined
[2026-01-09 03:49:50] 2026-01-09 02:48:49,686 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 03:49:50] 2026-01-09 02:48:49,686 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 03:49:50] 2026-01-09 02:48:49,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:49:50] 2026-01-09 02:48:49,686 | INFO     | will abort loop
[2026-01-09 03:49:50] 2026-01-09 02:48:50,248 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:50,312 | INFO     | all job control threads have been joined
[2026-01-09 03:49:50] 2026-01-09 02:48:50,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:49:50] 2026-01-09 02:48:50,416 | INFO     | [data] control thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:50,519 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:50,535 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:50,692 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:50,726 | INFO     | all payload control threads have been joined
[2026-01-09 03:49:50] 2026-01-09 02:48:50,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:49:50] 2026-01-09 02:48:50,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:49:50] 2026-01-09 02:48:50,992 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,215 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,231 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,318 | INFO     | [job] control thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,337 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,539 | INFO     | [job] validate thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,732 | INFO     | [payload] control thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:51,788 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:52,397 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:48:54,969 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:49:50] 2026-01-09 02:49:18,712 | INFO     | PID=1310 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 03:49:50] 2026-01-09 02:49:18,712 | INFO     | .. there are 2 such processes running
[2026-01-09 03:49:50] 2026-01-09 02:49:18,713 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:49:50] 2026-01-09 02:49:18,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:49:50] 2026-01-09 02:49:18,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:49:50] 2026-01-09 02:49:38,020 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:49:50] 2026-01-09 02:49:40,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490207905600)>', '<ExcThread(monitor, started 140489764357888)>']
[2026-01-09 03:49:50] 2026-01-09 02:49:40,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:49:50] 2026-01-09 02:49:40,845 | INFO     | [monitor] control thread has ended
[2026-01-09 03:49:50] 2026-01-09 02:49:45,107 | INFO     | all workflow threads have been joined
[2026-01-09 03:49:50] 2026-01-09 02:49:45,107 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:49:50] 2026-01-09 02:49:45,107 | INFO     | traces error code: 0
[2026-01-09 03:49:50] 2026-01-09 02:49:45,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:49:50] 2026-01-09 02:49:45,575 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:49:50] 2026-01-09 02:49:45,656 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:49:50] 2026-01-09 02:49:45,755 [wrapper] pilotpid: 1310
[2026-01-09 03:49:50] 2026-01-09 02:49:45,861 [wrapper] Pilot exit status: 0
[2026-01-09 03:49:50] 2026-01-09 02:49:46,385 [wrapper] pandaids: 6962914970
[2026-01-09 03:49:50] 2026-01-09 02:49:47,405 [wrapper] cleanup supervisor_pilot  7103 1311
[2026-01-09 03:49:50] 2026-01-09 02:49:47,501 [wrapper] Test setup, not cleaning
[2026-01-09 03:49:50] 2026-01-09 02:49:47,595 [wrapper] apfmon messages muted
[2026-01-09 03:49:50] 2026-01-09 02:49:47,698 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:49:50] 2026-01-09 02:49:47,815 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:49:50]  *** Error codes and diagnostics ***
[2026-01-09 03:49:50]     "exeErrorCode": 0,
[2026-01-09 03:49:50]     "exeErrorDiag": "",
[2026-01-09 03:49:50]     "pilotErrorCode": 0,
[2026-01-09 03:49:50]     "pilotErrorDiag": "",
[2026-01-09 03:49:50]  *** Listing of results directory ***
[2026-01-09 03:49:50] total 450116
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-09 03:49:50] -rwx------. 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:49:50] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:52 run_atlas
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:52 job.xml
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc      6391 Jan  8 21:52 init_data.xml
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc 226926217 Jan  8 21:52 EVNT.47898824._000390.pool.root.1
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:52 start_atlas.sh
[2026-01-09 03:49:50] drwxrwx--x. 2 boinc boinc        68 Jan  8 21:52 shared
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc    592397 Jan  8 21:52 input.tar.gz
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:52 boinc_lockfile
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc      2518 Jan  8 21:52 pandaJob.out
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc    989845 Jan  8 21:56 agis_schedconf.cvmfs.json
[2026-01-09 03:49:50] drwx------. 5 boinc boinc      4096 Jan  8 21:57 pilot3
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc 223397004 Jan  9 03:45 HITS.47898826._017935.pool.root.1
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc       531 Jan  9 03:45 boinc_task_state.xml
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc      1015 Jan  9 03:46 memory_monitor_summary.json
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc   1516240 Jan  9 03:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc    544095 Jan  9 03:46 log.47898826._017935.job.log.tgz.1
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc      7780 Jan  9 03:48 heartbeat.json
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc        95 Jan  9 03:49 pilot_heartbeat.json
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc      8192 Jan  9 03:49 boinc_mmap_file
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc        28 Jan  9 03:49 wrapper_checkpoint.txt
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc      5070 Jan  9 03:49 pilotlog.txt
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc   2801723 Jan  9 03:49 log.47898826._017935.job.log.1
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc       357 Jan  9 03:49 output.list
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc       620 Jan  9 03:49 runtime_log
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc   3368960 Jan  9 03:49 result.tar.gz
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc       657 Jan  9 03:49 uQLLDmT8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaJeKDmOVun3m.diag
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc      8833 Jan  9 03:49 runtime_log.err
[2026-01-09 03:49:50] -rw-r--r--. 1 boinc boinc     20774 Jan  9 03:49 stderr.txt
[2026-01-09 03:49:50] HITS file was successfully produced:
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc 223397004 Jan  9 03:45 shared/HITS.pool.root.1
[2026-01-09 03:49:50]  *** Contents of shared directory: ***
[2026-01-09 03:49:50] total 443660
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc 226926217 Jan  8 21:52 ATLAS.root_0
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:52 start_atlas.sh
[2026-01-09 03:49:50] -rw-r--r--. 2 boinc boinc    592397 Jan  8 21:52 input.tar.gz
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc 223397004 Jan  9 03:45 HITS.pool.root.1
[2026-01-09 03:49:50] -rw-------. 1 boinc boinc   3368960 Jan  9 03:49 result.tar.gz
03:49:52 (29991): run_atlas exited; CPU time 77580.298721
03:49:52 (29991): called boinc_finish(0)

</stderr_txt>
]]>

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