Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:24 (300668): wrapper (7.7.26015): starting
08:04:24 (300668): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 08:04:24] Arguments: --nthreads 9
[2026-01-08 08:04:24] Threads: 9
[2026-01-08 08:04:24] Checking for CVMFS
[2026-01-08 08:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:04:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:04:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:04:26] 2.13.3.0 6317 20105 173532 154908 1 306 33826893 39288832 9067 16776704 0 6128247 99.383 11003944 39399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 08:04:26] CVMFS is ok
[2026-01-08 08:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:04:26] Further information can be found at the LHC@home message board.
[2026-01-08 08:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:04:26] Checking for apptainer binary...
[2026-01-08 08:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:04:26] Running /usr/bin/apptainer --version
[2026-01-08 08:04:26] apptainer version 1.4.5-2.el9
[2026-01-08 08:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:04:27] c-211-18.aglt2.org
[2026-01-08 08:04:27] apptainer works
[2026-01-08 08:04:27] Set ATHENA_PROC_NUMBER=9
[2026-01-08 08:04:27] Set ATHENA_CORE_NUMBER=9
[2026-01-08 08:04:27] Starting ATLAS job with PandaID=6962914088
[2026-01-08 08:04:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 20:33:06]  *** The last 200 lines of the pilot log: ***
[2026-01-08 20:33:06] 2026-01-09 01:32:29,365 | INFO     | number of running child processes to parent process 311781: 1
[2026-01-08 20:33:06] 2026-01-09 01:32:29,366 | INFO     | maximum number of monitored processes: 6
[2026-01-08 20:33:06] 2026-01-09 01:32:31,224 | INFO     | time since job start (44825s) is within the limit (174528.0s)
[2026-01-08 20:33:06] 2026-01-09 01:32:31,869 | INFO     | monitor loop #2552: job 0:6962914088 is in state 'finished'
[2026-01-08 20:33:06] 2026-01-09 01:32:31,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,230 | INFO     | time since job start (44827s) is within the limit (174528.0s)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,756 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 20:33:06] 2026-01-09 01:32:33,773 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2700.0196499999993
[2026-01-08 20:33:06] 2026-01-09 01:32:33,783 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962914088/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,784 | INFO     | extracted standard info from prmon json
[2026-01-08 20:33:06] 2026-01-09 01:32:33,784 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 20:33:06] 2026-01-09 01:32:33,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 20:33:06] 2026-01-09 01:32:33,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 20:33:06] 2026-01-09 01:32:33,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 20:33:06] 2026-01-09 01:32:33,807 | INFO     | fitting pss+swap vs Time
[2026-01-08 20:33:06] 2026-01-09 01:32:33,809 | INFO     | sum of square deviations: 122118315080.0349
[2026-01-08 20:33:06] 2026-01-09 01:32:33,833 | INFO     | sum of deviations: 203218681139.90176
[2026-01-08 20:33:06] 2026-01-09 01:32:33,834 | INFO     | mean x: 1767899990.2305593
[2026-01-08 20:33:06] 2026-01-09 01:32:33,834 | INFO     | mean y: 2582446.3615279673
[2026-01-08 20:33:06] 2026-01-09 01:32:33,834 | INFO     | intersect: -2939402989.3729725
[2026-01-08 20:33:06] 2026-01-09 01:32:33,835 | INFO     | chi2: 3.4826950116104083
[2026-01-08 20:33:06] 2026-01-09 01:32:33,837 | INFO     | sum of square deviations: 119636534342.41212
[2026-01-08 20:33:06] 2026-01-09 01:32:33,857 | INFO     | sum of deviations: 251971024029.4809
[2026-01-08 20:33:06] 2026-01-09 01:32:33,857 | INFO     | mean x: 1767899837.739011
[2026-01-08 20:33:06] 2026-01-09 01:32:33,857 | INFO     | mean y: 2585425.528846154
[2026-01-08 20:33:06] 2026-01-09 01:32:33,858 | INFO     | intersect: -3720855201.9111004
[2026-01-08 20:33:06] 2026-01-09 01:32:33,859 | INFO     | chi2: 2.769550229606504
[2026-01-08 20:33:06] 2026-01-09 01:32:33,859 | INFO     | current chi2=2.769550229606504 (change=20.476808323050484 %)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,859 | INFO     | right removable region: 727
[2026-01-08 20:33:06] 2026-01-09 01:32:33,861 | INFO     | sum of square deviations: 119636073185.36255
[2026-01-08 20:33:06] 2026-01-09 01:32:33,880 | INFO     | sum of deviations: 17690018353.670372
[2026-01-08 20:33:06] 2026-01-09 01:32:33,881 | INFO     | mean x: 1767900142.7362638
[2026-01-08 20:33:06] 2026-01-09 01:32:33,881 | INFO     | mean y: 2593827.717032967
[2026-01-08 20:33:06] 2026-01-09 01:32:33,881 | INFO     | intersect: -258817176.00259903
[2026-01-08 20:33:06] 2026-01-09 01:32:33,882 | INFO     | chi2: 1.0681395496148063
[2026-01-08 20:33:06] 2026-01-09 01:32:33,883 | INFO     | current chi2=1.0681395496148063 (change=69.33008644013029 %)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,884 | INFO     | sum of square deviations: 117187780959.60529
[2026-01-08 20:33:06] 2026-01-09 01:32:33,907 | INFO     | sum of deviations: -38801439837.50629
[2026-01-08 20:33:06] 2026-01-09 01:32:33,907 | INFO     | mean x: 1767900295.2392807
[2026-01-08 20:33:06] 2026-01-09 01:32:33,907 | INFO     | mean y: 2597344.257261411
[2026-01-08 20:33:06] 2026-01-09 01:32:33,908 | INFO     | intersect: 587957664.102229
[2026-01-08 20:33:06] 2026-01-09 01:32:33,909 | INFO     | chi2: 0.8583875990153979
[2026-01-08 20:33:06] 2026-01-09 01:32:33,909 | INFO     | current chi2=0.8583875990153979 (change=19.637129874560813 %)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,909 | INFO     | left removable region: 20
[2026-01-08 20:33:06] 2026-01-09 01:32:33,911 | INFO     | sum of square deviations: 109578438790.66202
[2026-01-08 20:33:06] 2026-01-09 01:32:33,929 | INFO     | sum of deviations: 1040153761.190874
[2026-01-08 20:33:06] 2026-01-09 01:32:33,930 | INFO     | mean x: 1767900417.2560112
[2026-01-08 20:33:06] 2026-01-09 01:32:33,930 | INFO     | mean y: 2601133.1315417257
[2026-01-08 20:33:06] 2026-01-09 01:32:33,930 | INFO     | intersect: -14180345.859345857
[2026-01-08 20:33:06] 2026-01-09 01:32:33,931 | INFO     | chi2: 0.10468563423978461
[2026-01-08 20:33:06] 2026-01-09 01:32:33,932 | INFO     | current memory leak: 0.01 B/s (using 707 data points, chi2=0.10)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,933 | INFO     | could have reported an average CPU frequency of 2885 MHz (28 samples)
[2026-01-08 20:33:06] 2026-01-09 01:32:33,933 | INFO     | ..............................
[2026-01-08 20:33:06] 2026-01-09 01:32:33,933 | INFO     | . Timing measurements:
[2026-01-08 20:33:06] 2026-01-09 01:32:33,933 | INFO     | . get job = 0 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . initial setup = 6 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . payload setup = 45 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . stage-in = 0 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . payload execution = 44714 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . stage-out = 2 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,934 | INFO     | . log creation = 0 s
[2026-01-08 20:33:06] 2026-01-09 01:32:33,935 | INFO     | ..............................
[2026-01-08 20:33:06] 2026-01-09 01:32:34,405 | INFO     | 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,406 | INFO     | job summary report
[2026-01-08 20:33:06] 2026-01-09 01:32:34,406 | INFO     | --------------------------------------------------
[2026-01-08 20:33:06] 2026-01-09 01:32:34,406 | INFO     | PanDA job id: 6962914088
[2026-01-08 20:33:06] 2026-01-09 01:32:34,406 | INFO     | task id: 47898826
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | errors: (none)
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | pilot state: finished 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | transexitcode: 0
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | exeerrorcode: 0
[2026-01-08 20:33:06] 2026-01-09 01:32:34,407 | INFO     | exeerrordiag: 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | exitcode: 0
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | exitmsg: OK
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | cpuconsumptiontime: 107843 s
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | nevents: 400
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | neventsw: 0
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | pid: 311781
[2026-01-08 20:33:06] 2026-01-09 01:32:34,408 | INFO     | pgrp: 311781
[2026-01-08 20:33:06] 2026-01-09 01:32:34,409 | INFO     | corecount: 9
[2026-01-08 20:33:06] 2026-01-09 01:32:34,409 | INFO     | event service: False
[2026-01-08 20:33:06] 2026-01-09 01:32:34,409 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2284024, 3: 2284024, 14: 2284052, 25: 2284136, 26: 2284498, 35: 2284526, 44764: 2329199, 44766: 2338197, 44769: 2338253, 44775: 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,409 | INFO     | --------------------------------------------------
[2026-01-08 20:33:06] 2026-01-09 01:32:34,409 | INFO     | 
[2026-01-08 20:33:06] 2026-01-09 01:32:34,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 20:33:06] 2026-01-09 01:32:34,431 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,432 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,435 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 20:33:06] 2026-01-09 01:32:34,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,435 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 20:33:06] 2026-01-09 01:32:34,435 | INFO     | job 6962914088 has completed (purged errors)
[2026-01-08 20:33:06] 2026-01-09 01:32:34,436 | INFO     | overall cleanup function is called
[2026-01-08 20:33:06] 2026-01-09 01:32:35,445 | INFO     | --- collectZombieJob: --- 10, [311781]
[2026-01-08 20:33:06] 2026-01-09 01:32:35,445 | INFO     | zombie collector waiting for pid 311781
[2026-01-08 20:33:06] 2026-01-09 01:32:35,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 20:33:06] 2026-01-09 01:32:35,445 | INFO     | collected zombie processes
[2026-01-08 20:33:06] 2026-01-09 01:32:35,445 | INFO     | will attempt to kill all subprocesses of pid=311781
[2026-01-08 20:33:06] 2026-01-09 01:32:35,722 | INFO     | process IDs to be killed: [311781] (in reverse order)
[2026-01-08 20:33:06] 2026-01-09 01:32:35,823 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 20:33:06] 2026-01-09 01:32:35,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 20:33:06] 2026-01-09 01:32:35,834 | INFO     | did not find any defunct processes belonging to 311781
[2026-01-08 20:33:06] 2026-01-09 01:32:35,846 | INFO     | did not find any defunct processes belonging to 311781
[2026-01-08 20:33:06] 2026-01-09 01:32:35,847 | INFO     | ready for new job
[2026-01-08 20:33:06] 2026-01-09 01:32:35,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 20:33:06] 2026-01-09 01:32:35,851 | INFO     | ***************************************
[2026-01-08 20:33:06] 2026-01-09 01:32:35,851 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 20:33:06] 2026-01-09 01:32:35,851 | INFO     | ***************************************
[2026-01-08 20:33:06] 2026-01-09 01:32:35,852 | INFO     | 
[2026-01-08 20:33:06] 2026-01-09 01:32:35,854 | INFO     | architecture information:
[2026-01-08 20:33:06] 2026-01-09 01:32:35,854 | INFO     | executing command: cat /etc/os-release
[2026-01-08 20:33:06] 2026-01-09 01:32:35,877 | INFO     | cat /etc/os-release:
[2026-01-08 20:33:06] NAME="CentOS Linux"
[2026-01-08 20:33:06] VERSION="7 (Core)"
[2026-01-08 20:33:06] ID="centos"
[2026-01-08 20:33:06] ID_LIKE="rhel fedora"
[2026-01-08 20:33:06] VERSION_ID="7"
[2026-01-08 20:33:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 20:33:06] ANSI_COLOR="0;31"
[2026-01-08 20:33:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 20:33:06] HOME_URL="https://www.centos.org/"
[2026-01-08 20:33:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 20:33:06] 
[2026-01-08 20:33:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 20:33:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 20:33:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 20:33:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 20:33:06] 
[2026-01-08 20:33:06] 2026-01-09 01:32:35,878 | INFO     | ***************************************
[2026-01-08 20:33:06] 2026-01-09 01:32:36,384 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 20:33:06] 2026-01-09 01:32:36,408 | INFO     | sufficient remaining disk space (53314846720 B)
[2026-01-08 20:33:06] 2026-01-09 01:32:36,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 20:33:06] 2026-01-09 01:32:36,409 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 20:33:06] 2026-01-09 01:32:36,409 | INFO     | update_server=False
[2026-01-08 20:33:06] 2026-01-09 01:32:36,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 20:33:06] 2026-01-09 01:32:36,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 20:33:06] 2026-01-09 01:32:36,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 20:33:06] 2026-01-09 01:32:36,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 20:33:06] 2026-01-09 01:32:36,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:33:06] 2026-01-09 01:32:36,879 | INFO     | will abort loop
[2026-01-08 20:33:06] 2026-01-09 01:32:36,995 | INFO     | all data control threads have been joined
[2026-01-08 20:33:06] 2026-01-09 01:32:37,033 | INFO     | all payload control threads have been joined
[2026-01-08 20:33:06] 2026-01-09 01:32:37,410 | INFO     | [job] retrieve thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,574 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,575 | INFO     | [payload] failed_post thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,735 | INFO     | [job] validate thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,830 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,884 | INFO     | [job] job monitor thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:37,945 | INFO     | all job control threads have been joined
[2026-01-08 20:33:06] 2026-01-09 01:32:38,000 | INFO     | [data] control thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,038 | INFO     | [payload] control thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,411 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,416 | INFO     | [data] copytool_out thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,655 | INFO     | [payload] validate_post thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,749 | INFO     | [data] copytool_in thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:38,950 | INFO     | [job] control thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:39,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:33:06] 2026-01-09 01:32:39,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 20:33:06] 2026-01-09 01:32:40,136 | INFO     | [job] queue monitor thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:43,213 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:46,608 | INFO     | job.realtimelogging is not enabled
[2026-01-08 20:33:06] 2026-01-09 01:32:47,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 20:33:06] 2026-01-09 01:32:50,130 | INFO     | [monitor] cgroup control has ended
[2026-01-08 20:33:06] 2026-01-09 01:32:51,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496250144576)>', '<ExcThread(monitor, started 140495879657216)>']
[2026-01-08 20:33:06] 2026-01-09 01:32:56,652 | INFO     | all workflow threads have been joined
[2026-01-08 20:33:06] 2026-01-09 01:32:56,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 20:33:06] 2026-01-09 01:32:56,653 | INFO     | traces error code: 0
[2026-01-08 20:33:06] 2026-01-09 01:32:56,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 20:33:06] 2026-01-09 01:33:06,576 | INFO     | PID=304818 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 20:33:06] 2026-01-09 01:33:06,576 | INFO     | .. there are 7 such processes running
[2026-01-08 20:33:06] 2026-01-09 01:33:06,577 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 20:33:06] 2026-01-09 01:33:06,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 20:33:06] 2026-01-09 01:33:06,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 20:33:06] 2026-01-09 01:33:06,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 20:33:06] 2026-01-09 01:33:06,577 | INFO     | [monitor] control thread has ended
[2026-01-08 20:33:06] 2026-01-09 01:33:06,696 [wrapper] ==== pilot stdout END ====
[2026-01-08 20:33:06] 2026-01-09 01:33:06,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 20:33:06] 2026-01-09 01:33:06,701 [wrapper] pilotpid: 304818
[2026-01-08 20:33:06] 2026-01-09 01:33:06,703 [wrapper] Pilot exit status: 0
[2026-01-08 20:33:06] 2026-01-09 01:33:06,717 [wrapper] pandaids: 6962914088
[2026-01-08 20:33:06] 2026-01-09 01:33:06,764 [wrapper] cleanup supervisor_pilot 1377109 304819
[2026-01-08 20:33:06] 2026-01-09 01:33:06,767 [wrapper] Test setup, not cleaning
[2026-01-08 20:33:06] 2026-01-09 01:33:06,770 [wrapper] apfmon messages muted
[2026-01-08 20:33:06] 2026-01-09 01:33:06,772 [wrapper] ==== wrapper stdout END ====
[2026-01-08 20:33:06] 2026-01-09 01:33:06,775 [wrapper] ==== wrapper stderr END ====
[2026-01-08 20:33:06]  *** Error codes and diagnostics ***
[2026-01-08 20:33:06]     "exeErrorCode": 0,
[2026-01-08 20:33:06]     "exeErrorDiag": "",
[2026-01-08 20:33:06]     "pilotErrorCode": 0,
[2026-01-08 20:33:06]     "pilotErrorDiag": "",
[2026-01-08 20:33:06]  *** Listing of results directory ***
[2026-01-08 20:33:06] total 450808
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 20:33:06] -rwx------. 1 boincer umatlas     36322 Jan  8 03:00 runpilot2-wrapper.sh
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:01 queuedata.json
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas       100 Jan  8 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 20:33:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 08:04 run_atlas
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas       105 Jan  8 08:04 job.xml
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas 228678797 Jan  8 08:04 EVNT.47898824._000310.pool.root.1
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 08:04 start_atlas.sh
[2026-01-08 20:33:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 08:04 shared
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas    592394 Jan  8 08:04 input.tar.gz
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas         0 Jan  8 08:04 boinc_lockfile
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 08:04 pandaJob.out
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas        57 Jan  8 08:04 setup.sh.local
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas    989843 Jan  8 08:05 agis_schedconf.cvmfs.json
[2026-01-08 20:33:06] drwx------. 5 boincer umatlas      4096 Jan  8 08:05 pilot3
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas      6525 Jan  8 20:29 init_data.xml
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas 216577077 Jan  8 20:31 HITS.47898826._017305.pool.root.1
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas       532 Jan  8 20:31 boinc_task_state.xml
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas        95 Jan  8 20:32 pilot_heartbeat.json
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas      1040 Jan  8 20:32 memory_monitor_summary.json
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas   1516240 Jan  8 20:32 agis_ddmendpoints.agis.ALL.json
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas    833354 Jan  8 20:32 log.47898826._017305.job.log.tgz.1
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas      7819 Jan  8 20:32 heartbeat.json
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 20:33 boinc_mmap_file
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas       821 Jan  8 20:33 pilotlog.txt
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas   5398797 Jan  8 20:33 log.47898826._017305.job.log.1
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas       357 Jan  8 20:33 output.list
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas       620 Jan  8 20:33 runtime_log
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas   6246400 Jan  8 20:33 result.tar.gz
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 20:33 runtime_log.err
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas       660 Jan  8 20:33 9gLODm57zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2MjKDmvh96kn.diag
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas        29 Jan  8 20:33 wrapper_checkpoint.txt
[2026-01-08 20:33:06] -rw-r--r--. 1 boincer umatlas     21355 Jan  8 20:33 stderr.txt
[2026-01-08 20:33:06] HITS file was successfully produced:
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas 216577077 Jan  8 20:31 shared/HITS.pool.root.1
[2026-01-08 20:33:06]  *** Contents of shared directory: ***
[2026-01-08 20:33:06] total 441524
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas 228678797 Jan  8 08:04 ATLAS.root_0
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 08:04 start_atlas.sh
[2026-01-08 20:33:06] -rw-r--r--. 2 boincer umatlas    592394 Jan  8 08:04 input.tar.gz
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas 216577077 Jan  8 20:31 HITS.pool.root.1
[2026-01-08 20:33:06] -rw-------. 1 boincer umatlas   6246400 Jan  8 20:33 result.tar.gz
20:33:08 (300668): run_atlas exited; CPU time 109015.148546
20:33:08 (300668): called boinc_finish(0)

</stderr_txt>
]]>

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