Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:38:35 (14958): wrapper (7.7.26015): starting
19:38:35 (14958): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 19:38:35] Arguments: --nthreads 8
[2026-01-08 19:38:35] Threads: 8
[2026-01-08 19:38:35] Checking for CVMFS
[2026-01-08 19:38:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:38:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:38:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:38:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:38:39] 2.11.2.0 10693 34345 100548 154916 1 61 19781168 25165825 96 130560 0 14867823 99.823 8360688 3398 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 19:38:39] CVMFS is ok
[2026-01-08 19:38:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:38:39] Checking for apptainer binary...
[2026-01-08 19:38:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 19:38:39] Running /usr/bin/apptainer --version
[2026-01-08 19:38:39] apptainer version 1.3.2-1.el7
[2026-01-08 19:38:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:38:47] cg-vwn439.simple-grid.lan
[2026-01-08 19:38:47] apptainer works
[2026-01-08 19:38:47] Set ATHENA_PROC_NUMBER=8
[2026-01-08 19:38:47] Set ATHENA_CORE_NUMBER=8
[2026-01-08 19:38:47] Starting ATLAS job with PandaID=6962931509
[2026-01-08 19:38:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:40:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:40:02] 2026-01-09 00:39:12,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:14,294 | INFO     | time since job start (21360s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:15,224 | INFO     | monitor loop #1541: job 0:6962931509 is in state 'finished'
[2026-01-09 01:40:02] 2026-01-09 00:39:15,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:16,307 | INFO     | time since job start (21362s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:17,739 | INFO     | monitor loop #1542: job 0:6962931509 is in state 'finished'
[2026-01-09 01:40:02] 2026-01-09 00:39:17,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:18,315 | INFO     | time since job start (21364s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:20,244 | INFO     | monitor loop #1543: job 0:6962931509 is in state 'finished'
[2026-01-09 01:40:02] 2026-01-09 00:39:20,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:20,328 | INFO     | time since job start (21366s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:22,337 | INFO     | time since job start (21368s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:22,749 | INFO     | monitor loop #1544: job 0:6962931509 is in state 'finished'
[2026-01-09 01:40:02] 2026-01-09 00:39:22,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:24,349 | INFO     | time since job start (21370s) is within the limit (174528.0s)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,263 | INFO     | monitor loop #1545: job 0:6962931509 is in state 'finished'
[2026-01-09 01:40:02] 2026-01-09 00:39:25,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,327 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 01:40:02] 2026-01-09 00:39:25,328 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 01:40:02] 2026-01-09 00:39:25,330 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6962931509/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,331 | INFO     | extracted standard info from prmon json
[2026-01-09 01:40:02] 2026-01-09 00:39:25,331 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:40:02] 2026-01-09 00:39:25,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:40:02] 2026-01-09 00:39:25,339 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:40:02] 2026-01-09 00:39:25,339 | INFO     | sum of square deviations: 12080250861.687235
[2026-01-09 01:40:02] 2026-01-09 00:39:25,344 | INFO     | sum of deviations: 183124896423.5135
[2026-01-09 01:40:02] 2026-01-09 00:39:25,344 | INFO     | mean x: 1767908687.9174042
[2026-01-09 01:40:02] 2026-01-09 00:39:25,344 | INFO     | mean y: 2369343.946902655
[2026-01-09 01:40:02] 2026-01-09 00:39:25,344 | INFO     | intersect: -26797413133.07748
[2026-01-09 01:40:02] 2026-01-09 00:39:25,345 | INFO     | chi2: 36.43476224154219
[2026-01-09 01:40:02] 2026-01-09 00:39:25,346 | INFO     | sum of square deviations: 11553666069.9162
[2026-01-09 01:40:02] 2026-01-09 00:39:25,350 | INFO     | sum of deviations: 277585638591.378
[2026-01-09 01:40:02] 2026-01-09 00:39:25,350 | INFO     | mean x: 1767908535.4311378
[2026-01-09 01:40:02] 2026-01-09 00:39:25,350 | INFO     | mean y: 2396718.5598802394
[2026-01-09 01:40:02] 2026-01-09 00:39:25,350 | INFO     | intersect: -42472954118.92192
[2026-01-09 01:40:02] 2026-01-09 00:39:25,351 | INFO     | chi2: 32.54739411989067
[2026-01-09 01:40:02] 2026-01-09 00:39:25,351 | INFO     | current chi2=32.54739411989067 (change=10.66939341028338 %)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,351 | INFO     | right removable region: 333
[2026-01-09 01:40:02] 2026-01-09 00:39:25,352 | INFO     | sum of square deviations: 11553476359.916206
[2026-01-09 01:40:02] 2026-01-09 00:39:25,356 | INFO     | sum of deviations: 61177740194.886505
[2026-01-09 01:40:02] 2026-01-09 00:39:25,356 | INFO     | mean x: 1767908840.4311378
[2026-01-09 01:40:02] 2026-01-09 00:39:25,356 | INFO     | mean y: 2404651.7994011976
[2026-01-09 01:40:02] 2026-01-09 00:39:25,357 | INFO     | intersect: -9358991378.176434
[2026-01-09 01:40:02] 2026-01-09 00:39:25,357 | INFO     | chi2: 30.648802689586383
[2026-01-09 01:40:02] 2026-01-09 00:39:25,357 | INFO     | current chi2=30.648802689586383 (change=15.880327456504627 %)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,357 | INFO     | left removable region: 10
[2026-01-09 01:40:02] 2026-01-09 00:39:25,358 | INFO     | sum of square deviations: 10449156475.554125
[2026-01-09 01:40:02] 2026-01-09 00:39:25,362 | INFO     | sum of deviations: 67461311321.30362
[2026-01-09 01:40:02] 2026-01-09 00:39:25,362 | INFO     | mean x: 1767908809.9628482
[2026-01-09 01:40:02] 2026-01-09 00:39:25,362 | INFO     | mean y: 2474027.1919504646
[2026-01-09 01:40:02] 2026-01-09 00:39:25,363 | INFO     | intersect: -11411408700.624544
[2026-01-09 01:40:02] 2026-01-09 00:39:25,363 | INFO     | chi2: 21.11925480882665
[2026-01-09 01:40:02] 2026-01-09 00:39:25,363 | INFO     | current memory leak: 6.46 B/s (using 323 data points, chi2=21.12)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,364 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,364 | INFO     | ..............................
[2026-01-09 01:40:02] 2026-01-09 00:39:25,364 | INFO     | . Timing measurements:
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . get job = 0 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . initial setup = 5 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . payload setup = 192 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . stage-in = 0 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . payload execution = 20846 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . stage-out = 4 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | . log creation = 2 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,365 | INFO     | ..............................
[2026-01-09 01:40:02] 2026-01-09 00:39:25,517 | INFO     | 
[2026-01-09 01:40:02] 2026-01-09 00:39:25,517 | INFO     | job summary report
[2026-01-09 01:40:02] 2026-01-09 00:39:25,517 | INFO     | --------------------------------------------------
[2026-01-09 01:40:02] 2026-01-09 00:39:25,517 | INFO     | PanDA job id: 6962931509
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | task id: 47961985
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | errors: (none)
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | pilot state: finished 
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | transexitcode: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | exeerrorcode: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | exeerrordiag: 
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | exitcode: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:25,518 | INFO     | exitmsg: OK
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | cpuconsumptiontime: 67505 s
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | nevents: 150
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | neventsw: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | pid: 25130
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | pgrp: 25130
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | corecount: 8
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | event service: False
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | sizes: {0: 2283720, 1: 2284405, 2: 2284604, 13: 2284604, 23: 2284660, 34: 2284688, 45: 2284844, 56: 2284872, 66: 2284900, 77: 2284928, 88: 2284984, 99: 2285292, 10
[2026-01-09 01:40:02] 2026-01-09 00:39:25,519 | INFO     | --------------------------------------------------
[2026-01-09 01:40:02] 2026-01-09 00:39:25,520 | INFO     | 
[2026-01-09 01:40:02] 2026-01-09 00:39:25,520 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 01:40:02] 2026-01-09 00:39:26,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | job 6962931509 has completed (purged errors)
[2026-01-09 01:40:02] 2026-01-09 00:39:26,221 | INFO     | overall cleanup function is called
[2026-01-09 01:40:02] 2026-01-09 00:39:27,247 | INFO     | --- collectZombieJob: --- 10, [25130]
[2026-01-09 01:40:02] 2026-01-09 00:39:27,247 | INFO     | zombie collector waiting for pid 25130
[2026-01-09 01:40:02] 2026-01-09 00:39:27,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:40:02] 2026-01-09 00:39:27,248 | INFO     | collected zombie processes
[2026-01-09 01:40:02] 2026-01-09 00:39:27,248 | INFO     | will attempt to kill all subprocesses of pid=25130
[2026-01-09 01:40:02] 2026-01-09 00:39:27,338 | INFO     | process IDs to be killed: [25130] (in reverse order)
[2026-01-09 01:40:02] 2026-01-09 00:39:28,277 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:40:02] 2026-01-09 00:39:28,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:40:02] 2026-01-09 00:39:28,279 | INFO     | did not find any defunct processes belonging to 25130
[2026-01-09 01:40:02] 2026-01-09 00:39:28,281 | INFO     | did not find any defunct processes belonging to 25130
[2026-01-09 01:40:02] 2026-01-09 00:39:28,281 | INFO     | ready for new job
[2026-01-09 01:40:02] 2026-01-09 00:39:28,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:40:02] 2026-01-09 00:39:28,284 | INFO     | ***************************************
[2026-01-09 01:40:02] 2026-01-09 00:39:28,284 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:40:02] 2026-01-09 00:39:28,284 | INFO     | ***************************************
[2026-01-09 01:40:02] 2026-01-09 00:39:28,284 | INFO     | 
[2026-01-09 01:40:02] 2026-01-09 00:39:28,285 | INFO     | pilot is running in a VM
[2026-01-09 01:40:02] 2026-01-09 00:39:28,285 | INFO     | architecture information:
[2026-01-09 01:40:02] 2026-01-09 00:39:28,287 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:40:02] 2026-01-09 00:39:28,418 | INFO     | cat /etc/os-release:
[2026-01-09 01:40:02] NAME="CentOS Linux"
[2026-01-09 01:40:02] VERSION="7 (Core)"
[2026-01-09 01:40:02] ID="centos"
[2026-01-09 01:40:02] ID_LIKE="rhel fedora"
[2026-01-09 01:40:02] VERSION_ID="7"
[2026-01-09 01:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:40:02] ANSI_COLOR="0;31"
[2026-01-09 01:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:40:02] HOME_URL="https://www.centos.org/"
[2026-01-09 01:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:40:02] 
[2026-01-09 01:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:40:02] 
[2026-01-09 01:40:02] 2026-01-09 00:39:28,419 | INFO     | ***************************************
[2026-01-09 01:40:02] 2026-01-09 00:39:28,922 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 01:40:02] 2026-01-09 00:39:29,015 | INFO     | sufficient remaining disk space (496702062592 B)
[2026-01-09 01:40:02] 2026-01-09 00:39:29,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:40:02] 2026-01-09 00:39:29,015 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:40:02] 2026-01-09 00:39:29,016 | INFO     | update_server=False
[2026-01-09 01:40:02] 2026-01-09 00:39:29,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:40:02] 2026-01-09 00:39:29,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:40:02] 2026-01-09 00:39:29,017 | INFO     | aborting loop
[2026-01-09 01:40:02] 2026-01-09 00:39:29,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:40:02] 2026-01-09 00:39:30,022 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,023 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,087 | INFO     | all data control threads have been joined
[2026-01-09 01:40:02] 2026-01-09 00:39:30,135 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,217 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,246 | INFO     | all payload control threads have been joined
[2026-01-09 01:40:02] 2026-01-09 00:39:30,341 | INFO     | all job control threads have been joined
[2026-01-09 01:40:02] 2026-01-09 00:39:30,411 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,414 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,509 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:40:02] 2026-01-09 00:39:30,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:40:02] 2026-01-09 00:39:30,765 | INFO     | [job] validate thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:30,886 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,026 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,093 | INFO     | [data] control thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,252 | INFO     | [payload] control thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,347 | INFO     | [job] control thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,356 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:31,543 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:34,749 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:40:02] 2026-01-09 00:39:50,193 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:40:02] 2026-01-09 00:39:51,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104131057472)>', '<ExcThread(monitor, started 140103527667456)>']
[2026-01-09 01:40:02] 2026-01-09 00:39:56,028 | INFO     | all workflow threads have been joined
[2026-01-09 01:40:02] 2026-01-09 00:39:56,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:40:02] 2026-01-09 00:39:56,028 | INFO     | traces error code: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:56,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:40:02] 2026-01-09 00:39:57,498 | INFO     | PID=18679 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:40:02] 2026-01-09 00:39:57,499 | INFO     | .. there are 2 such processes running
[2026-01-09 01:40:02] 2026-01-09 00:39:57,500 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:40:02] 2026-01-09 00:39:57,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:40:02] 2026-01-09 00:39:57,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:40:02] 2026-01-09 00:39:57,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:40:02] 2026-01-09 00:39:57,500 | INFO     | [monitor] control thread has ended
[2026-01-09 01:40:02] 2026-01-09 00:39:57,646 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:40:02] 2026-01-09 00:39:57,682 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:40:02] 2026-01-09 00:39:57,767 [wrapper] pilotpid: 18679
[2026-01-09 01:40:02] 2026-01-09 00:39:57,850 [wrapper] Pilot exit status: 0
[2026-01-09 01:40:02] 2026-01-09 00:39:58,384 [wrapper] pandaids: 6962931509
[2026-01-09 01:40:02] 2026-01-09 00:39:59,327 [wrapper] cleanup supervisor_pilot 25607 18680
[2026-01-09 01:40:02] 2026-01-09 00:39:59,413 [wrapper] Test setup, not cleaning
[2026-01-09 01:40:02] 2026-01-09 00:39:59,514 [wrapper] apfmon messages muted
[2026-01-09 01:40:02] 2026-01-09 00:39:59,630 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:40:02] 2026-01-09 00:39:59,723 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:40:02]  *** Error codes and diagnostics ***
[2026-01-09 01:40:02]     "exeErrorCode": 0,
[2026-01-09 01:40:02]     "exeErrorDiag": "",
[2026-01-09 01:40:02]     "pilotErrorCode": 0,
[2026-01-09 01:40:02]     "pilotErrorDiag": "",
[2026-01-09 01:40:02]  *** Listing of results directory ***
[2026-01-09 01:40:02] total 564272
[2026-01-09 01:40:02] -rwx------. 1 boinc boinc     36322 Jan  8 09:21 runpilot2-wrapper.sh
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:27 queuedata.json
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc       100 Jan  8 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:40:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 19:38 run_atlas
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc       105 Jan  8 19:38 job.xml
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc 412828867 Jan  8 19:38 EVNT.47961981._000024.pool.root.1
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc     15847 Jan  8 19:38 start_atlas.sh
[2026-01-09 01:40:02] drwxrwx--x. 2 boinc boinc        68 Jan  8 19:38 shared
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc    592608 Jan  8 19:38 input.tar.gz
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc      6390 Jan  8 19:38 init_data.xml
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc         0 Jan  8 19:38 boinc_lockfile
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc      2875 Jan  8 19:38 pandaJob.out
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc    989829 Jan  8 19:43 agis_schedconf.cvmfs.json
[2026-01-09 01:40:02] drwx------. 5 boinc boinc      4096 Jan  8 19:43 pilot3
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc       531 Jan  9 01:11 boinc_task_state.xml
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc 152366214 Jan  9 01:36 HITS.47961985._000641.pool.root.1
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc      1019 Jan  9 01:37 memory_monitor_summary.json
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc   1516240 Jan  9 01:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc   1457871 Jan  9 01:37 log.47961985._000641.job.log.tgz.1
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc      7944 Jan  9 01:39 heartbeat.json
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc      8192 Jan  9 01:39 boinc_mmap_file
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc        28 Jan  9 01:39 wrapper_checkpoint.txt
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc        95 Jan  9 01:39 pilot_heartbeat.json
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc       820 Jan  9 01:39 pilotlog.txt
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc   2906965 Jan  9 01:39 log.47961985._000641.job.log.1
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc       353 Jan  9 01:40 output.list
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc       620 Jan  9 01:40 runtime_log
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc   4382720 Jan  9 01:40 result.tar.gz
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc       657 Jan  9 01:40 RyIMDmuR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM8jKDm9gCben.diag
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc      8817 Jan  9 01:40 runtime_log.err
[2026-01-09 01:40:02] -rw-r--r--. 1 boinc boinc     21349 Jan  9 01:40 stderr.txt
[2026-01-09 01:40:02] HITS file was successfully produced:
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc 152366214 Jan  9 01:36 shared/HITS.pool.root.1
[2026-01-09 01:40:02]  *** Contents of shared directory: ***
[2026-01-09 01:40:02] total 556828
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc 412828867 Jan  8 19:38 ATLAS.root_0
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc     15847 Jan  8 19:38 start_atlas.sh
[2026-01-09 01:40:02] -rw-r--r--. 2 boinc boinc    592608 Jan  8 19:38 input.tar.gz
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc 152366214 Jan  9 01:36 HITS.pool.root.1
[2026-01-09 01:40:02] -rw-------. 1 boinc boinc   4382720 Jan  9 01:40 result.tar.gz
01:40:04 (14958): run_atlas exited; CPU time 67588.260987
01:40:04 (14958): called boinc_finish(0)

</stderr_txt>
]]>

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