Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:52:20 (544778): wrapper (7.7.26015): starting
04:52:20 (544778): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 04:52:20] Arguments: --nthreads 12
[2026-01-08 04:52:20] Threads: 12
[2026-01-08 04:52:20] Checking for CVMFS
[2026-01-08 04:52:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 04:52:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 04:52:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 04:52:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 04:52:21] 2.11.5.0 4065894 55121 332980 154908 2 487 34265502 45568001 14822 130560 0 367618141 99.771 259738065 23448 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 04:52:21] CVMFS is ok
[2026-01-08 04:52:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 04:52:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 04:52:21] Further information can be found at the LHC@home message board.
[2026-01-08 04:52:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:52:21] Checking for apptainer binary...
[2026-01-08 04:52:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 04:52:21] Running /usr/bin/apptainer --version
[2026-01-08 04:52:22] apptainer version 1.4.1-1.el9
[2026-01-08 04:52:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:52:22] wns0085.triumf.lcg
[2026-01-08 04:52:22] apptainer works
[2026-01-08 04:52:22] Set ATHENA_PROC_NUMBER=12
[2026-01-08 04:52:22] Set ATHENA_CORE_NUMBER=12
[2026-01-08 04:52:22] Starting ATLAS job with PandaID=6962922693
[2026-01-08 04:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:56:43]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . Timing measurements:
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . get job = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . initial setup = 3 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload setup = 7 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-in = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload execution = 35 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-out = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . log creation = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962922693/pilotlog.txt
[2026-01-08 04:56:43] 2026-01-08 12:55:58,962 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 04:56:43] - Log from pilotlog.txt -
[2026-01-08 04:56:43] 2026-01-08 12:55:58,815 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:56:43] 2026-01-08 12:55:58,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:56:43] 2026-01-08 12:55:58,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | found no stored workdir sizes
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | wrong length of table data, x=[1767876797.0], y=[2182.0] (must be same and length>=4)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . Timing measurements:
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . get job = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . initial setup = 3 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload setup = 7 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-in = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload execution = 35 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-out = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . log creation = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962922693/pilotlog.txt
[2026-01-08 04:56:43] 2026-01-08 12:55:58,962 | WARNING  | 
[2026-01-08 04:56:43] [begin log extracts]
[2026-01-08 04:56:43] - Log from pilotlog.txt -
[2026-01-08 04:56:43] 2026-01-08 12:55:58,815 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:56:43] 2026-01-08 12:55:58,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:56:43] 2026-01-08 12:55:58,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | found no stored workdir sizes
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | WARNING  | wrong length of table data, x=[1767876797.0], y=[2182.0] (must be same and length>=4)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,828 | INFO     | could have reported an average CPU frequency of 2682 MHz (4 samples)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . Timing measurements:
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . get job = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . initial setup = 3 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload setup = 7 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-in = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . payload execution = 35 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . stage-out = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | . log creation = 0 s
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | ..............................
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:56:43] 2026-01-08 12:55:58,829 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962922693/pilotlog.txt
[2026-01-08 04:56:43] [end log extracts]
[2026-01-08 04:56:43] 2026-01-08 12:55:58,962 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 04:56:43] 2026-01-08 12:55:58,963 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 04:56:43] 2026-01-08 12:55:59,652 | INFO     | 
[2026-01-08 04:56:43] 2026-01-08 12:55:59,652 | INFO     | job summary report
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | --------------------------------------------------
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | PanDA job id: 6962922693
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | task id: 47898826
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 04:53:36,208 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | pilot state: failed 
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | transexitcode: 65
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | exeerrorcode: 65
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | exitcode: 65
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | cpuconsumptiontime: 16 s
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | nevents: 0
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | neventsw: 0
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | pid: 556100
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | pgrp: 556100
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | corecount: 12
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | event service: False
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | sizes: {0: 2283794, 1: 2283993, 8: 2284255, 11: 2284283, 47: 2307702, 49: 2312150, 182: 2312288}
[2026-01-08 04:56:43] 2026-01-08 12:55:59,653 | INFO     | --------------------------------------------------
[2026-01-08 04:56:43] 2026-01-08 12:55:59,654 | INFO     | 
[2026-01-08 04:56:43] 2026-01-08 12:55:59,654 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | job 6962922693 has completed (purged errors)
[2026-01-08 04:56:43] 2026-01-08 12:55:59,841 | INFO     | overall cleanup function is called
[2026-01-08 04:56:43] 2026-01-08 12:56:00,515 | INFO     | PID=548454 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 04:56:43] 2026-01-08 12:56:00,516 | INFO     | .. there are 28 such processes running
[2026-01-08 04:56:43] 2026-01-08 12:56:00,848 | INFO     | --- collectZombieJob: --- 10, [556100]
[2026-01-08 04:56:43] 2026-01-08 12:56:00,849 | INFO     | zombie collector waiting for pid 556100
[2026-01-08 04:56:43] 2026-01-08 12:56:00,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:56:43] 2026-01-08 12:56:00,849 | INFO     | collected zombie processes
[2026-01-08 04:56:43] 2026-01-08 12:56:00,849 | INFO     | will attempt to kill all subprocesses of pid=556100
[2026-01-08 04:56:43] 2026-01-08 12:56:01,313 | INFO     | process IDs to be killed: [556100] (in reverse order)
[2026-01-08 04:56:43] 2026-01-08 12:56:01,427 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:56:43] 2026-01-08 12:56:01,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:56:43] 2026-01-08 12:56:01,435 | INFO     | did not find any defunct processes belonging to 556100
[2026-01-08 04:56:43] 2026-01-08 12:56:01,442 | INFO     | did not find any defunct processes belonging to 556100
[2026-01-08 04:56:43] 2026-01-08 12:56:01,442 | INFO     | ready for new job
[2026-01-08 04:56:43] 2026-01-08 12:56:01,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:56:43] 2026-01-08 12:56:01,445 | INFO     | ***************************************
[2026-01-08 04:56:43] 2026-01-08 12:56:01,445 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:56:43] 2026-01-08 12:56:01,445 | INFO     | ***************************************
[2026-01-08 04:56:43] 2026-01-08 12:56:01,445 | INFO     | 
[2026-01-08 04:56:43] 2026-01-08 12:56:01,447 | INFO     | architecture information:
[2026-01-08 04:56:43] 2026-01-08 12:56:01,459 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:56:43] 2026-01-08 12:56:01,480 | INFO     | cat /etc/os-release:
[2026-01-08 04:56:43] NAME="CentOS Linux"
[2026-01-08 04:56:43] VERSION="7 (Core)"
[2026-01-08 04:56:43] ID="centos"
[2026-01-08 04:56:43] ID_LIKE="rhel fedora"
[2026-01-08 04:56:43] VERSION_ID="7"
[2026-01-08 04:56:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:56:43] ANSI_COLOR="0;31"
[2026-01-08 04:56:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:56:43] HOME_URL="https://www.centos.org/"
[2026-01-08 04:56:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:56:43] 
[2026-01-08 04:56:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:56:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:56:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:56:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:56:43] 
[2026-01-08 04:56:43] 2026-01-08 12:56:01,480 | INFO     | ***************************************
[2026-01-08 04:56:43] 2026-01-08 12:56:01,984 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 04:56:43] 2026-01-08 12:56:02,004 | INFO     | sufficient remaining disk space (1802695081984 B)
[2026-01-08 04:56:43] 2026-01-08 12:56:02,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:56:43] 2026-01-08 12:56:02,004 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:56:43] 2026-01-08 12:56:02,004 | INFO     | update_server=False
[2026-01-08 04:56:43] 2026-01-08 12:56:02,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:56:43] 2026-01-08 12:56:02,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 04:56:43] 2026-01-08 12:56:02,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 04:56:43] 2026-01-08 12:56:02,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:56:43] 2026-01-08 12:56:02,348 | INFO     | will abort loop
[2026-01-08 04:56:43] 2026-01-08 12:56:02,521 | INFO     | all data control threads have been joined
[2026-01-08 04:56:43] 2026-01-08 12:56:02,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:56:43] 2026-01-08 12:56:02,684 | INFO     | all payload control threads have been joined
[2026-01-08 04:56:43] 2026-01-08 12:56:02,789 | INFO     | all job control threads have been joined
[2026-01-08 04:56:43] 2026-01-08 12:56:03,010 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,166 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,227 | INFO     | [job] validate thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,346 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,354 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,424 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,463 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,527 | INFO     | [data] control thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,609 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,662 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,689 | INFO     | [payload] control thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,795 | INFO     | [job] control thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:03,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:56:43] 2026-01-08 12:56:04,462 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:04,657 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:04,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:56:43] 2026-01-08 12:56:05,674 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:07,936 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:56:43] 2026-01-08 12:56:32,794 | INFO     | PID=548454 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 04:56:43] 2026-01-08 12:56:32,795 | INFO     | .. there are 28 such processes running
[2026-01-08 04:56:43] 2026-01-08 12:56:32,795 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:56:43] 2026-01-08 12:56:32,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:56:43] 2026-01-08 12:56:32,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:56:43] 2026-01-08 12:56:37,158 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:56:43] 2026-01-08 12:56:38,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903712991040)>', '<ExcThread(monitor, started 139903014774528)>']
[2026-01-08 04:56:43] 2026-01-08 12:56:38,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:56:43] 2026-01-08 12:56:38,831 | INFO     | [monitor] control thread has ended
[2026-01-08 04:56:43] 2026-01-08 12:56:43,190 | INFO     | all workflow threads have been joined
[2026-01-08 04:56:43] 2026-01-08 12:56:43,190 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:56:43] 2026-01-08 12:56:43,191 | INFO     | traces error code: 0
[2026-01-08 04:56:43] 2026-01-08 12:56:43,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:56:43] 2026-01-08 12:56:43,345 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:56:43] 2026-01-08 12:56:43,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:56:43] 2026-01-08 12:56:43,348 [wrapper] pilotpid: 548454
[2026-01-08 04:56:43] 2026-01-08 12:56:43,350 [wrapper] Pilot exit status: 0
[2026-01-08 04:56:43] 2026-01-08 12:56:43,359 [wrapper] pandaids: 6962922693
[2026-01-08 04:56:43] 2026-01-08 12:56:43,403 [wrapper] cleanup supervisor_pilot  548460 548455
[2026-01-08 04:56:43] 2026-01-08 12:56:43,405 [wrapper] Test setup, not cleaning
[2026-01-08 04:56:43] 2026-01-08 12:56:43,407 [wrapper] apfmon messages muted
[2026-01-08 04:56:43] 2026-01-08 12:56:43,409 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:56:43] 2026-01-08 12:56:43,411 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:56:43]  *** Error codes and diagnostics ***
[2026-01-08 04:56:43]     "exeErrorCode": 65,
[2026-01-08 04:56:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 04:56:43]     "pilotErrorCode": 1305,
[2026-01-08 04:56:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 04:56:43]  *** Listing of results directory ***
[2026-01-08 04:56:43] total 223780
[2026-01-08 04:56:43] -rwx------. 1 boinc boinc     36322 Jan  8 00:20 runpilot2-wrapper.sh
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc    579449 Jan  8 00:23 pilot3.tar.gz
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc      5112 Jan  8 00:27 queuedata.json
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc       100 Jan  8 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:56:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 04:52 run_atlas
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc       105 Jan  8 04:52 job.xml
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc      6595 Jan  8 04:52 init_data.xml
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc 225025250 Jan  8 04:52 EVNT.47898824._000852.pool.root.1
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:52 start_atlas.sh
[2026-01-08 04:56:43] drwxrwx--x. 2 boinc boinc      4096 Jan  8 04:52 shared
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc    592400 Jan  8 04:52 input.tar.gz
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc         0 Jan  8 04:52 boinc_lockfile
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc      2518 Jan  8 04:52 pandaJob.out
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc    989843 Jan  8 04:52 agis_schedconf.cvmfs.json
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc   1516240 Jan  8 04:52 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:56:43] drwx------. 5 boinc boinc      4096 Jan  8 04:52 pilot3
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc       522 Jan  8 04:53 boinc_task_state.xml
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc       949 Jan  8 04:53 memory_monitor_summary.json
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc     20785 Jan  8 04:53 log.47898826._022128.job.log.tgz.1
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc        95 Jan  8 04:55 pilot_heartbeat.json
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc      8409 Jan  8 04:55 heartbeat.json
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc        22 Jan  8 04:56 wrapper_checkpoint.txt
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc      8192 Jan  8 04:56 boinc_mmap_file
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc      5008 Jan  8 04:56 pilotlog.txt
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc     86986 Jan  8 04:56 log.47898826._022128.job.log.1
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc       188 Jan  8 04:56 output.list
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc       620 Jan  8 04:56 runtime_log
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc    122880 Jan  8 04:56 result.tar.gz
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc      8636 Jan  8 04:56 runtime_log.err
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc       645 Jan  8 04:56 p0zMDmIR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW3jKDmpOPgUm.diag
[2026-01-08 04:56:43] -rw-r--r--. 1 boinc boinc     21281 Jan  8 04:56 stderr.txt
[2026-01-08 04:56:43] No HITS result produced
[2026-01-08 04:56:43]  *** Contents of shared directory: ***
[2026-01-08 04:56:43] total 220472
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc 225025250 Jan  8 04:52 ATLAS.root_0
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:52 start_atlas.sh
[2026-01-08 04:56:43] -rw-r--r--. 2 boinc boinc    592400 Jan  8 04:52 input.tar.gz
[2026-01-08 04:56:43] -rw-------. 1 boinc boinc    122880 Jan  8 04:56 result.tar.gz
04:56:44 (544778): run_atlas exited; CPU time 23.858074
04:56:44 (544778): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN