Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:55 (1840668): wrapper (7.7.26015): starting
05:18:55 (1840668): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 05:18:55] Arguments: --nthreads 12
[2026-01-08 05:18:55] Threads: 12
[2026-01-08 05:18:55] Checking for CVMFS
[2026-01-08 05:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:18:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:18:57] 2.11.5.0 3814305 90072 192864 154909 3 32 31005858 45568000 17487 130560 0 740876720 99.790 463533317 19259 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 05:18:57] CVMFS is ok
[2026-01-08 05:18:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 05:18:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 05:18:58] Further information can be found at the LHC@home message board.
[2026-01-08 05:18:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:18:58] Checking for apptainer binary...
[2026-01-08 05:18:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:18:58] Running /usr/bin/apptainer --version
[2026-01-08 05:18:58] apptainer version 1.4.1-1.el9
[2026-01-08 05:18:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:18:59] wns0094.triumf.lcg
[2026-01-08 05:18:59] apptainer works
[2026-01-08 05:18:59] Set ATHENA_PROC_NUMBER=12
[2026-01-08 05:18:59] Set ATHENA_CORE_NUMBER=12
[2026-01-08 05:18:59] Starting ATLAS job with PandaID=6962931592
[2026-01-08 05:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:25:37]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | wrong length of table data, x=[1767878448.0, 1767878509.0], y=[2437.0, 714269.0] (must be same and length>=4)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . Timing measurements:
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . get job = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . initial setup = 3 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload setup = 27 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-in = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload execution = 111 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-out = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . log creation = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:25:37] 2026-01-08 13:24:55,617 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931592/pilotlog.txt
[2026-01-08 05:25:37] 2026-01-08 13:24:55,630 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 05:25:37] - Log from pilotlog.txt -
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931592/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | extracted standard info from prmon json
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | wrong length of table data, x=[1767878448.0, 1767878509.0], y=[2437.0, 714269.0] (must be same and length>=4)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . Timing measurements:
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . get job = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . initial setup = 3 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload setup = 27 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-in = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload execution = 111 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-out = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . log creation = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:25:37] 2026-01-08 13:24:55,617 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931592/pilotlog.txt
[2026-01-08 05:25:37] 2026-01-08 13:24:55,630 | WARNING  | 
[2026-01-08 05:25:37] [begin log extracts]
[2026-01-08 05:25:37] - Log from pilotlog.txt -
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931592/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | extracted standard info from prmon json
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:25:37] 2026-01-08 13:24:55,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:25:37] 2026-01-08 13:24:55,615 | WARNING  | wrong length of table data, x=[1767878448.0, 1767878509.0], y=[2437.0, 714269.0] (must be same and length>=4)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | could have reported an average CPU frequency of 2726 MHz (4 samples)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . Timing measurements:
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . get job = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . initial setup = 3 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload setup = 27 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-in = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . payload execution = 111 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . stage-out = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | . log creation = 0 s
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | ..............................
[2026-01-08 05:25:37] 2026-01-08 13:24:55,616 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 05:25:37] 2026-01-08 13:24:55,617 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931592/pilotlog.txt
[2026-01-08 05:25:37] [end log extracts]
[2026-01-08 05:25:37] 2026-01-08 13:24:55,631 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-08 05:25:37] 2026-01-08 13:24:55,631 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | 
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | job summary report
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | --------------------------------------------------
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | PanDA job id: 6962931592
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | task id: 47961985
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 05:22:14,372 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 05:25:37] 2026-01-08 13:24:56,051 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | pilot state: failed 
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | transexitcode: 65
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | exeerrorcode: 65
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | exitcode: 65
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | cpuconsumptiontime: 39 s
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | nevents: 0
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | neventsw: 0
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | pid: 1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | pgrp: 1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | corecount: 12
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | event service: False
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | sizes: {0: 2284545, 11: 2284545, 21: 2284835, 22: 2284863, 143: 2310319, 144: 2310295, 145: 2314741, 148: 2314769, 297: 2314935}
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | --------------------------------------------------
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | 
[2026-01-08 05:25:37] 2026-01-08 13:24:56,052 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 05:25:37] 2026-01-08 13:24:56,155 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:25:37] 2026-01-08 13:24:56,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,161 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:25:37] 2026-01-08 13:24:56,161 | INFO     | job 6962931592 has completed (purged errors)
[2026-01-08 05:25:37] 2026-01-08 13:24:56,161 | INFO     | overall cleanup function is called
[2026-01-08 05:25:37] 2026-01-08 13:24:57,172 | INFO     | --- collectZombieJob: --- 10, [1859396]
[2026-01-08 05:25:37] 2026-01-08 13:24:57,172 | INFO     | zombie collector waiting for pid 1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:57,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:25:37] 2026-01-08 13:24:57,172 | INFO     | collected zombie processes
[2026-01-08 05:25:37] 2026-01-08 13:24:57,172 | INFO     | will attempt to kill all subprocesses of pid=1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:57,487 | INFO     | process IDs to be killed: [1859396] (in reverse order)
[2026-01-08 05:25:37] 2026-01-08 13:24:57,563 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:25:37] 2026-01-08 13:24:57,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:25:37] 2026-01-08 13:24:57,576 | INFO     | did not find any defunct processes belonging to 1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:57,584 | INFO     | did not find any defunct processes belonging to 1859396
[2026-01-08 05:25:37] 2026-01-08 13:24:57,584 | INFO     | ready for new job
[2026-01-08 05:25:37] 2026-01-08 13:24:57,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:25:37] 2026-01-08 13:24:57,586 | INFO     | ***************************************
[2026-01-08 05:25:37] 2026-01-08 13:24:57,586 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:25:37] 2026-01-08 13:24:57,586 | INFO     | ***************************************
[2026-01-08 05:25:37] 2026-01-08 13:24:57,586 | INFO     | 
[2026-01-08 05:25:37] 2026-01-08 13:24:57,587 | INFO     | architecture information:
[2026-01-08 05:25:37] 2026-01-08 13:24:57,588 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:25:37] 2026-01-08 13:24:57,599 | INFO     | cat /etc/os-release:
[2026-01-08 05:25:37] NAME="CentOS Linux"
[2026-01-08 05:25:37] VERSION="7 (Core)"
[2026-01-08 05:25:37] ID="centos"
[2026-01-08 05:25:37] ID_LIKE="rhel fedora"
[2026-01-08 05:25:37] VERSION_ID="7"
[2026-01-08 05:25:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:25:37] ANSI_COLOR="0;31"
[2026-01-08 05:25:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:25:37] HOME_URL="https://www.centos.org/"
[2026-01-08 05:25:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:25:37] 
[2026-01-08 05:25:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:25:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:25:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:25:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:25:37] 
[2026-01-08 05:25:37] 2026-01-08 13:24:57,599 | INFO     | ***************************************
[2026-01-08 05:25:37] 2026-01-08 13:24:58,101 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 05:25:37] 2026-01-08 13:24:58,113 | INFO     | sufficient remaining disk space (2156694339584 B)
[2026-01-08 05:25:37] 2026-01-08 13:24:58,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | INFO     | update_server=False
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | INFO     | aborting loop
[2026-01-08 05:25:37] 2026-01-08 13:24:58,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:25:37] 2026-01-08 13:24:58,218 | INFO     | all data control threads have been joined
[2026-01-08 05:25:37] 2026-01-08 13:24:59,119 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,120 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,224 | INFO     | [data] control thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,454 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,626 | INFO     | all payload control threads have been joined
[2026-01-08 05:25:37] 2026-01-08 13:24:59,656 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,718 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:24:59,764 | INFO     | all job control threads have been joined
[2026-01-08 05:25:37] 2026-01-08 13:24:59,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,104 | INFO     | [job] validate thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,117 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,121 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,479 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,483 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,632 | INFO     | [payload] control thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,770 | INFO     | [job] control thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:00,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:25:37] 2026-01-08 13:25:01,829 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:02,127 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:25:37] 2026-01-08 13:25:28,549 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:25:37] 2026-01-08 13:25:28,786 | INFO     | PID=1844463 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 05:25:37] 2026-01-08 13:25:28,787 | INFO     | .. there are 35 such processes running
[2026-01-08 05:25:37] 2026-01-08 13:25:28,787 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:25:37] 2026-01-08 13:25:28,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:25:37] 2026-01-08 13:25:28,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:25:37] 2026-01-08 13:25:30,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836759627584)>', '<ExcThread(monitor, started 139835931088640)>']
[2026-01-08 05:25:37] 2026-01-08 13:25:30,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:25:37] 2026-01-08 13:25:30,803 | INFO     | [monitor] control thread has ended
[2026-01-08 05:25:37] 2026-01-08 13:25:35,548 | INFO     | all workflow threads have been joined
[2026-01-08 05:25:37] 2026-01-08 13:25:35,548 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:25:37] 2026-01-08 13:25:35,548 | INFO     | traces error code: 0
[2026-01-08 05:25:37] 2026-01-08 13:25:35,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:25:37] 2026-01-08 13:25:36,054 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:25:37] 2026-01-08 13:25:36,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:25:37] 2026-01-08 13:25:36,132 [wrapper] pilotpid: 1844463
[2026-01-08 05:25:37] 2026-01-08 13:25:36,162 [wrapper] Pilot exit status: 0
[2026-01-08 05:25:37] 2026-01-08 13:25:36,354 [wrapper] pandaids: 6962931592
[2026-01-08 05:25:37] 2026-01-08 13:25:36,957 [wrapper] cleanup supervisor_pilot 1844469 1844464
[2026-01-08 05:25:37] 2026-01-08 13:25:36,980 [wrapper] Test setup, not cleaning
[2026-01-08 05:25:37] 2026-01-08 13:25:37,084 [wrapper] apfmon messages muted
[2026-01-08 05:25:37] 2026-01-08 13:25:37,089 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:25:37] 2026-01-08 13:25:37,091 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:25:37]  *** Error codes and diagnostics ***
[2026-01-08 05:25:37]     "exeErrorCode": 65,
[2026-01-08 05:25:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-08 05:25:37]     "pilotErrorCode": 1305,
[2026-01-08 05:25:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-08 05:25:37]  *** Listing of results directory ***
[2026-01-08 05:25:37] total 410788
[2026-01-08 05:25:37] -rwx------. 1 boinc boinc     36322 Jan  8 00:21 runpilot2-wrapper.sh
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc      5112 Jan  8 00:23 queuedata.json
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc    579449 Jan  8 00:23 pilot3.tar.gz
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:25:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:18 run_atlas
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:18 job.xml
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc      6595 Jan  8 05:18 init_data.xml
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc 416420645 Jan  8 05:18 EVNT.47961981._000026.pool.root.1
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:18 start_atlas.sh
[2026-01-08 05:25:37] drwxrwx--x. 2 boinc boinc      4096 Jan  8 05:18 shared
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc    592602 Jan  8 05:18 input.tar.gz
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:18 boinc_lockfile
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc      2875 Jan  8 05:18 pandaJob.out
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc    989835 Jan  8 05:19 agis_schedconf.cvmfs.json
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc   1516240 Jan  8 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:25:37] drwx------. 5 boinc boinc      4096 Jan  8 05:19 pilot3
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc       525 Jan  8 05:21 boinc_task_state.xml
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc       991 Jan  8 05:22 memory_monitor_summary.json
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc     49434 Jan  8 05:22 log.47961985._000724.job.log.tgz.1
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc        95 Jan  8 05:24 pilot_heartbeat.json
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc     10337 Jan  8 05:24 heartbeat.json
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:25 boinc_mmap_file
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc        23 Jan  8 05:25 wrapper_checkpoint.txt
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc      4823 Jan  8 05:25 pilotlog.txt
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc    104628 Jan  8 05:25 log.47961985._000724.job.log.1
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc       186 Jan  8 05:25 output.list
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:25 runtime_log
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc    174080 Jan  8 05:25 result.tar.gz
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc      8636 Jan  8 05:25 runtime_log.err
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc       647 Jan  8 05:25 i6rLDmuR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7veKDmvmD3Ko.diag
[2026-01-08 05:25:37] -rw-r--r--. 1 boinc boinc     21664 Jan  8 05:25 stderr.txt
[2026-01-08 05:25:37] No HITS result produced
[2026-01-08 05:25:37]  *** Contents of shared directory: ***
[2026-01-08 05:25:37] total 407436
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc 416420645 Jan  8 05:18 ATLAS.root_0
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:18 start_atlas.sh
[2026-01-08 05:25:37] -rw-r--r--. 2 boinc boinc    592602 Jan  8 05:18 input.tar.gz
[2026-01-08 05:25:37] -rw-------. 1 boinc boinc    174080 Jan  8 05:25 result.tar.gz
05:25:38 (1840668): run_atlas exited; CPU time 45.680430
05:25:38 (1840668): called boinc_finish(0)

</stderr_txt>
]]>

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