Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:27:51 (395674): wrapper (7.7.26015): starting
14:27:51 (395674): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 14:27:51] Arguments: --nthreads 8
[2026-01-08 14:27:51] Threads: 8
[2026-01-08 14:27:51] Checking for CVMFS
[2026-01-08 14:27:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:27:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:27:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:27:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:27:53] 2.13.3.0 9278 92344 368132 154918 3 252 31454201 32935936 16394 16776704 0 452017323 99.752 304050958 33458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 14:27:53] CVMFS is ok
[2026-01-08 14:27:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:27:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:27:53] Further information can be found at the LHC@home message board.
[2026-01-08 14:27:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:27:53] Checking for apptainer binary...
[2026-01-08 14:27:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:27:53] Running /usr/bin/apptainer --version
[2026-01-08 14:27:53] apptainer version 1.4.5-2.el9
[2026-01-08 14:27:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:27:54] c-4-40.aglt2.org
[2026-01-08 14:27:54] apptainer works
[2026-01-08 14:27:54] Set ATHENA_PROC_NUMBER=8
[2026-01-08 14:27:54] Set ATHENA_CORE_NUMBER=8
[2026-01-08 14:27:54] Starting ATLAS job with PandaID=6962923064
[2026-01-08 14:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:29:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:29:17] 2026-01-09 07:28:19,868 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8740499999994
[2026-01-09 02:29:17] 2026-01-09 07:28:19,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962923064/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:29:17] 2026-01-09 07:28:19,901 | INFO     | extracted standard info from prmon json
[2026-01-09 02:29:17] 2026-01-09 07:28:19,901 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:29:17] 2026-01-09 07:28:19,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:29:17] 2026-01-09 07:28:19,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:29:17] 2026-01-09 07:28:19,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:29:17] 2026-01-09 07:28:19,915 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:29:17] 2026-01-09 07:28:19,916 | INFO     | sum of square deviations: 108651660504.53033
[2026-01-09 02:29:17] 2026-01-09 07:28:19,949 | INFO     | sum of deviations: 198336107265.47675
[2026-01-09 02:29:17] 2026-01-09 07:28:19,949 | INFO     | mean x: 1767922125.2567375
[2026-01-09 02:29:17] 2026-01-09 07:28:19,949 | INFO     | mean y: 2520018.2680851063
[2026-01-09 02:29:17] 2026-01-09 07:28:19,949 | INFO     | intersect: -3224699801.877319
[2026-01-09 02:29:17] 2026-01-09 07:28:19,950 | INFO     | chi2: 5.442411660326153
[2026-01-09 02:29:17] 2026-01-09 07:28:19,952 | INFO     | sum of square deviations: 106356329871.67984
[2026-01-09 02:29:17] 2026-01-09 07:28:19,989 | INFO     | sum of deviations: 243570786616.55978
[2026-01-09 02:29:17] 2026-01-09 07:28:19,989 | INFO     | mean x: 1767921972.76
[2026-01-09 02:29:17] 2026-01-09 07:28:19,989 | INFO     | mean y: 2523006.67
[2026-01-09 02:29:17] 2026-01-09 07:28:19,990 | INFO     | intersect: -4046264179.7757373
[2026-01-09 02:29:17] 2026-01-09 07:28:19,991 | INFO     | chi2: 4.761838241381453
[2026-01-09 02:29:17] 2026-01-09 07:28:19,991 | INFO     | current chi2=4.761838241381453 (change=12.504997075210492 %)
[2026-01-09 02:29:17] 2026-01-09 07:28:19,991 | INFO     | right removable region: 699
[2026-01-09 02:29:17] 2026-01-09 07:28:20,011 | INFO     | sum of square deviations: 106356004066.10733
[2026-01-09 02:29:17] 2026-01-09 07:28:20,026 | INFO     | sum of deviations: -6291394960.771599
[2026-01-09 02:29:17] 2026-01-09 07:28:20,026 | INFO     | mean x: 1767922277.7642858
[2026-01-09 02:29:17] 2026-01-09 07:28:20,026 | INFO     | mean y: 2533603.977142857
[2026-01-09 02:29:17] 2026-01-09 07:28:20,026 | INFO     | intersect: 107113476.1435377
[2026-01-09 02:29:17] 2026-01-09 07:28:20,027 | INFO     | chi2: 2.399399599506503
[2026-01-09 02:29:17] 2026-01-09 07:28:20,028 | INFO     | current chi2=2.399399599506503 (change=55.91293438904047 %)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,029 | INFO     | sum of square deviations: 104093034114.22116
[2026-01-09 02:29:17] 2026-01-09 07:28:20,055 | INFO     | sum of deviations: -130526668791.95685
[2026-01-09 02:29:17] 2026-01-09 07:28:20,055 | INFO     | mean x: 1767922430.2676258
[2026-01-09 02:29:17] 2026-01-09 07:28:20,055 | INFO     | mean y: 2541968.9352517985
[2026-01-09 02:29:17] 2026-01-09 07:28:20,055 | INFO     | intersect: 2219414860.2778177
[2026-01-09 02:29:17] 2026-01-09 07:28:20,056 | INFO     | chi2: 1.2577023277582113
[2026-01-09 02:29:17] 2026-01-09 07:28:20,057 | INFO     | current chi2=1.2577023277582113 (change=47.582623252213196 %)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,058 | INFO     | sum of square deviations: 101862221253.62955
[2026-01-09 02:29:17] 2026-01-09 07:28:20,076 | INFO     | sum of deviations: -157128993852.28412
[2026-01-09 02:29:17] 2026-01-09 07:28:20,076 | INFO     | mean x: 1767922582.7768116
[2026-01-09 02:29:17] 2026-01-09 07:28:20,077 | INFO     | mean y: 2543782.907246377
[2026-01-09 02:29:17] 2026-01-09 07:28:20,077 | INFO     | intersect: 2729677485.8801103
[2026-01-09 02:29:17] 2026-01-09 07:28:20,078 | INFO     | chi2: 1.1765105831972205
[2026-01-09 02:29:17] 2026-01-09 07:28:20,078 | INFO     | current chi2=1.1765105831972205 (change=6.455561285770292 %)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,078 | INFO     | left removable region: 30
[2026-01-09 02:29:17] 2026-01-09 07:28:20,079 | INFO     | sum of square deviations: 92841496730.16158
[2026-01-09 02:29:17] 2026-01-09 07:28:20,096 | INFO     | sum of deviations: -22790760395.52918
[2026-01-09 02:29:17] 2026-01-09 07:28:20,096 | INFO     | mean x: 1767922857.2914798
[2026-01-09 02:29:17] 2026-01-09 07:28:20,097 | INFO     | mean y: 2540791.7668161434
[2026-01-09 02:29:17] 2026-01-09 07:28:20,097 | INFO     | intersect: 436531061.8226371
[2026-01-09 02:29:17] 2026-01-09 07:28:20,099 | INFO     | chi2: 0.3088973103216573
[2026-01-09 02:29:17] 2026-01-09 07:28:20,099 | INFO     | current memory leak: -0.25 B/s (using 669 data points, chi2=0.31)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,100 | INFO     | could have reported an average CPU frequency of 2599 MHz (27 samples)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,100 | INFO     | ..............................
[2026-01-09 02:29:17] 2026-01-09 07:28:20,100 | INFO     | . Timing measurements:
[2026-01-09 02:29:17] 2026-01-09 07:28:20,100 | INFO     | . get job = 0 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . initial setup = 5 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . payload setup = 39 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . stage-in = 0 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . payload execution = 43031 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . stage-out = 6 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | . log creation = 0 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,101 | INFO     | ..............................
[2026-01-09 02:29:17] 2026-01-09 07:28:20,705 | INFO     | PID=405011 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:29:17] 2026-01-09 07:28:20,705 | INFO     | .. there are 28 such processes running
[2026-01-09 02:29:17] 2026-01-09 07:28:20,828 | INFO     | 
[2026-01-09 02:29:17] 2026-01-09 07:28:20,828 | INFO     | job summary report
[2026-01-09 02:29:17] 2026-01-09 07:28:20,828 | INFO     | --------------------------------------------------
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | PanDA job id: 6962923064
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | task id: 47898826
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | errors: (none)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | pilot state: finished 
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | transexitcode: 0
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | exeerrorcode: 0
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | exeerrordiag: 
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | exitcode: 0
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | exitmsg: OK
[2026-01-09 02:29:17] 2026-01-09 07:28:20,829 | INFO     | cpuconsumptiontime: 73097 s
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | nevents: 400
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | neventsw: 0
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | pid: 425150
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | pgrp: 425150
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | corecount: 8
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | event service: False
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | sizes: {0: 2283968, 1: 2283996, 13: 2283996, 21: 2284314, 23: 2284342, 43075: 2327421, 43082: 2336419, 43085: 2336475, 43126: 2336669}
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | --------------------------------------------------
[2026-01-09 02:29:17] 2026-01-09 07:28:20,830 | INFO     | 
[2026-01-09 02:29:17] 2026-01-09 07:28:20,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 02:29:17] 2026-01-09 07:28:20,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | job 6962923064 has completed (purged errors)
[2026-01-09 02:29:17] 2026-01-09 07:28:20,992 | INFO     | overall cleanup function is called
[2026-01-09 02:29:17] 2026-01-09 07:28:22,011 | INFO     | --- collectZombieJob: --- 10, [425150]
[2026-01-09 02:29:17] 2026-01-09 07:28:22,011 | INFO     | zombie collector waiting for pid 425150
[2026-01-09 02:29:17] 2026-01-09 07:28:22,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:29:17] 2026-01-09 07:28:22,012 | INFO     | collected zombie processes
[2026-01-09 02:29:17] 2026-01-09 07:28:22,012 | INFO     | will attempt to kill all subprocesses of pid=425150
[2026-01-09 02:29:17] 2026-01-09 07:28:25,810 | INFO     | process IDs to be killed: [425150] (in reverse order)
[2026-01-09 02:29:17] 2026-01-09 07:28:25,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:29:17] 2026-01-09 07:28:25,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:29:17] 2026-01-09 07:28:25,988 | INFO     | did not find any defunct processes belonging to 425150
[2026-01-09 02:29:17] 2026-01-09 07:28:26,002 | INFO     | did not find any defunct processes belonging to 425150
[2026-01-09 02:29:17] 2026-01-09 07:28:26,003 | INFO     | ready for new job
[2026-01-09 02:29:17] 2026-01-09 07:28:26,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:29:17] 2026-01-09 07:28:26,006 | INFO     | ***************************************
[2026-01-09 02:29:17] 2026-01-09 07:28:26,006 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:29:17] 2026-01-09 07:28:26,007 | INFO     | ***************************************
[2026-01-09 02:29:17] 2026-01-09 07:28:26,007 | INFO     | 
[2026-01-09 02:29:17] 2026-01-09 07:28:26,009 | INFO     | architecture information:
[2026-01-09 02:29:17] 2026-01-09 07:28:26,011 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:29:17] 2026-01-09 07:28:26,229 | INFO     | cat /etc/os-release:
[2026-01-09 02:29:17] NAME="CentOS Linux"
[2026-01-09 02:29:17] VERSION="7 (Core)"
[2026-01-09 02:29:17] ID="centos"
[2026-01-09 02:29:17] ID_LIKE="rhel fedora"
[2026-01-09 02:29:17] VERSION_ID="7"
[2026-01-09 02:29:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:29:17] ANSI_COLOR="0;31"
[2026-01-09 02:29:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:29:17] HOME_URL="https://www.centos.org/"
[2026-01-09 02:29:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:29:17] 
[2026-01-09 02:29:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:29:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:29:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:29:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:29:17] 
[2026-01-09 02:29:17] 2026-01-09 07:28:26,229 | INFO     | ***************************************
[2026-01-09 02:29:17] 2026-01-09 07:28:26,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 02:29:17] 2026-01-09 07:28:26,926 | INFO     | sufficient remaining disk space (75278319616 B)
[2026-01-09 02:29:17] 2026-01-09 07:28:26,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:29:17] 2026-01-09 07:28:26,927 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:29:17] 2026-01-09 07:28:26,927 | INFO     | update_server=False
[2026-01-09 02:29:17] 2026-01-09 07:28:26,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:29:17] 2026-01-09 07:28:26,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:29:17] 2026-01-09 07:28:26,973 | INFO     | all data control threads have been joined
[2026-01-09 02:29:17] 2026-01-09 07:28:27,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:29:17] 2026-01-09 07:28:27,088 | INFO     | aborting loop
[2026-01-09 02:29:17] 2026-01-09 07:28:27,115 | INFO     | all payload control threads have been joined
[2026-01-09 02:29:17] 2026-01-09 07:28:27,837 | INFO     | all job control threads have been joined
[2026-01-09 02:29:17] 2026-01-09 07:28:27,933 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:27,979 | INFO     | [data] control thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,081 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,094 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,121 | INFO     | [payload] control thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:29:17] 2026-01-09 07:28:28,302 | INFO     | [job] validate thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,326 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,576 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,595 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:28,843 | INFO     | [job] control thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:29,058 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:29,156 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:29,410 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:29,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:29:17] 2026-01-09 07:28:30,201 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:30,639 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:30,968 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:29:17] 2026-01-09 07:28:49,457 [wrapper] supervise_pilot (15 min periods counter: 49)
[2026-01-09 02:29:17] 2026-01-09 07:28:53,819 | INFO     | PID=405011 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:29:17] 2026-01-09 07:28:53,820 | INFO     | .. there are 28 such processes running
[2026-01-09 02:29:17] 2026-01-09 07:28:53,821 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:29:17] 2026-01-09 07:28:53,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:29:17] 2026-01-09 07:28:53,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:29:17] 2026-01-09 07:29:09,148 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:29:17] 2026-01-09 07:29:09,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140283979396928)>', '<ExcThread(monitor, started 140283496888064)>']
[2026-01-09 02:29:17] 2026-01-09 07:29:09,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:29:17] 2026-01-09 07:29:09,952 | INFO     | [monitor] control thread has ended
[2026-01-09 02:29:17] 2026-01-09 07:29:14,463 | INFO     | all workflow threads have been joined
[2026-01-09 02:29:17] 2026-01-09 07:29:14,463 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:29:17] 2026-01-09 07:29:14,464 | INFO     | traces error code: 0
[2026-01-09 02:29:17] 2026-01-09 07:29:14,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:29:17] 2026-01-09 07:29:16,124 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:29:17] 2026-01-09 07:29:16,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:29:17] 2026-01-09 07:29:16,240 [wrapper] pilotpid: 405011
[2026-01-09 02:29:17] 2026-01-09 07:29:16,267 [wrapper] Pilot exit status: 0
[2026-01-09 02:29:17] 2026-01-09 07:29:16,442 [wrapper] pandaids: 6962923064
[2026-01-09 02:29:17] 2026-01-09 07:29:16,828 [wrapper] cleanup supervisor_pilot 3102652 405012
[2026-01-09 02:29:17] 2026-01-09 07:29:16,831 [wrapper] Test setup, not cleaning
[2026-01-09 02:29:17] 2026-01-09 07:29:16,834 [wrapper] apfmon messages muted
[2026-01-09 02:29:17] 2026-01-09 07:29:16,844 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:29:17] 2026-01-09 07:29:16,853 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:29:17]  *** Error codes and diagnostics ***
[2026-01-09 02:29:17]     "exeErrorCode": 0,
[2026-01-09 02:29:17]     "exeErrorDiag": "",
[2026-01-09 02:29:17]     "pilotErrorCode": 0,
[2026-01-09 02:29:17]     "pilotErrorDiag": "",
[2026-01-09 02:29:17]  *** Listing of results directory ***
[2026-01-09 02:29:17] total 452544
[2026-01-09 02:29:17] -rwx------. 1 boincer umatlas     36322 Jan  8 03:17 runpilot2-wrapper.sh
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas       100 Jan  8 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:29:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 14:27 run_atlas
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas       105 Jan  8 14:27 job.xml
[2026-01-09 02:29:17] -rw-r--r--. 2 boincer umatlas 224577801 Jan  8 14:27 EVNT.47898824._000864.pool.root.1
[2026-01-09 02:29:17] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 14:27 start_atlas.sh
[2026-01-09 02:29:17] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 14:27 shared
[2026-01-09 02:29:17] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 14:27 input.tar.gz
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas         0 Jan  8 14:27 boinc_lockfile
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 14:27 pandaJob.out
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas        57 Jan  8 14:27 setup.sh.local
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas    989845 Jan  8 14:28 agis_schedconf.cvmfs.json
[2026-01-09 02:29:17] drwx------. 5 boincer umatlas      4096 Jan  8 14:28 pilot3
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas      6658 Jan  9 02:22 init_data.xml
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas 223358723 Jan  9 02:25 HITS.47898826._022424.pool.root.1
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas       531 Jan  9 02:26 boinc_task_state.xml
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas      1067 Jan  9 02:27 memory_monitor_summary.json
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas   1516240 Jan  9 02:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas    807144 Jan  9 02:27 log.47898826._022424.job.log.tgz.1
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas      7841 Jan  9 02:28 heartbeat.json
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas        95 Jan  9 02:28 pilot_heartbeat.json
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas        28 Jan  9 02:29 wrapper_checkpoint.txt
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 02:29 boinc_mmap_file
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas      4823 Jan  9 02:29 pilotlog.txt
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas   4969478 Jan  9 02:29 log.47898826._022424.job.log.1
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas       357 Jan  9 02:29 output.list
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas       620 Jan  9 02:29 runtime_log
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas   5795840 Jan  9 02:29 result.tar.gz
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas      9333 Jan  9 02:29 runtime_log.err
[2026-01-09 02:29:17] -rw-------. 1 boincer umatlas       659 Jan  9 02:29 m84LDmDO0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB1jKDmFzW8No.diag
[2026-01-09 02:29:17] -rw-r--r--. 1 boincer umatlas     21263 Jan  9 02:29 stderr.txt
[2026-01-09 02:29:18] HITS file was successfully produced:
[2026-01-09 02:29:18] -rw-------. 1 boincer umatlas 223358723 Jan  9 02:25 shared/HITS.pool.root.1
[2026-01-09 02:29:18]  *** Contents of shared directory: ***
[2026-01-09 02:29:18] total 443700
[2026-01-09 02:29:18] -rw-r--r--. 2 boincer umatlas 224577801 Jan  8 14:27 ATLAS.root_0
[2026-01-09 02:29:18] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 14:27 start_atlas.sh
[2026-01-09 02:29:18] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 14:27 input.tar.gz
[2026-01-09 02:29:18] -rw-------. 1 boincer umatlas 223358723 Jan  9 02:25 HITS.pool.root.1
[2026-01-09 02:29:18] -rw-------. 1 boincer umatlas   5795840 Jan  9 02:29 result.tar.gz
02:29:40 (395674): run_atlas exited; CPU time 74633.993352
02:29:40 (395674): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN