Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:42 (11720): wrapper (7.7.26015): starting
18:59:42 (11720): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:59:42] Arguments: --nthreads 8
[2026-01-08 18:59:42] Threads: 8
[2026-01-08 18:59:42] Checking for CVMFS
[2026-01-08 18:59:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:59:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:59:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:59:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:59:42] 2.11.2.0 2053 34297 107812 154915 3 138 24184937 25165824 435 130560 0 6706741 99.650 9342991 4186 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 18:59:42] CVMFS is ok
[2026-01-08 18:59:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:59:42] Checking for apptainer binary...
[2026-01-08 18:59:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:59:42] Running /usr/bin/apptainer --version
[2026-01-08 18:59:42] apptainer version 1.3.2-1.el7
[2026-01-08 18:59:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:59:44] cg-vwn436.simple-grid.lan
[2026-01-08 18:59:44] apptainer works
[2026-01-08 18:59:44] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:59:44] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:59:44] Starting ATLAS job with PandaID=6962922886
[2026-01-08 18:59:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:01:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:01:50] 2026-01-09 00:01:00,380 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 01:01:50] 2026-01-09 00:01:00,381 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 01:01:50] 2026-01-09 00:01:00,383 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962922886/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,384 | INFO     | extracted standard info from prmon json
[2026-01-09 01:01:50] 2026-01-09 00:01:00,384 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:01:50] 2026-01-09 00:01:00,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:01:50] 2026-01-09 00:01:00,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 01:01:50] 2026-01-09 00:01:00,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 01:01:50] 2026-01-09 00:01:00,398 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:01:50] 2026-01-09 00:01:00,399 | INFO     | sum of square deviations: 13639518992.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,403 | INFO     | sum of deviations: 37747523825.99999
[2026-01-09 01:01:50] 2026-01-09 00:01:00,403 | INFO     | mean x: 1767905977.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,403 | INFO     | mean y: 2481548.9603399434
[2026-01-09 01:01:50] 2026-01-09 00:01:00,403 | INFO     | intersect: -4890218334.963491
[2026-01-09 01:01:50] 2026-01-09 00:01:00,404 | INFO     | chi2: 2.252138093109568
[2026-01-09 01:01:50] 2026-01-09 00:01:00,405 | INFO     | sum of square deviations: 13068103627.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,418 | INFO     | sum of deviations: 60129372559.00001
[2026-01-09 01:01:50] 2026-01-09 00:01:00,418 | INFO     | mean x: 1767905824.5
[2026-01-09 01:01:50] 2026-01-09 00:01:00,418 | INFO     | mean y: 2487450.8620689656
[2026-01-09 01:01:50] 2026-01-09 00:01:00,419 | INFO     | intersect: -8132056856.772122
[2026-01-09 01:01:50] 2026-01-09 00:01:00,429 | INFO     | chi2: 1.4783534117615376
[2026-01-09 01:01:50] 2026-01-09 00:01:00,430 | INFO     | current chi2=1.4783534117615376 (change=34.35778133301106 %)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,430 | INFO     | sum of square deviations: 12512874612.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,435 | INFO     | sum of deviations: 58959615453.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,435 | INFO     | mean x: 1767905672.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,435 | INFO     | mean y: 2487129.556851312
[2026-01-09 01:01:50] 2026-01-09 00:01:00,435 | INFO     | intersect: -8327736085.365711
[2026-01-09 01:01:50] 2026-01-09 00:01:00,436 | INFO     | chi2: 1.4786666037654765
[2026-01-09 01:01:50] 2026-01-09 00:01:00,436 | INFO     | current chi2=1.4786666037654765 (change=-0.021185191676582452 %)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,436 | INFO     | right removable region: 342
[2026-01-09 01:01:50] 2026-01-09 00:01:00,437 | INFO     | sum of square deviations: 13068103627.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,441 | INFO     | sum of deviations: -14613535577.000004
[2026-01-09 01:01:50] 2026-01-09 00:01:00,441 | INFO     | mean x: 1767906129.5
[2026-01-09 01:01:50] 2026-01-09 00:01:00,441 | INFO     | mean y: 2495428.9482758623
[2026-01-09 01:01:50] 2026-01-09 00:01:00,441 | INFO     | intersect: 1979473868.7936876
[2026-01-09 01:01:50] 2026-01-09 00:01:00,442 | INFO     | chi2: 0.8525164508628256
[2026-01-09 01:01:50] 2026-01-09 00:01:00,442 | INFO     | current chi2=0.8525164508628256 (change=62.14635090667373 %)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,443 | INFO     | sum of square deviations: 12512874612.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,447 | INFO     | sum of deviations: -10762732274.000004
[2026-01-09 01:01:50] 2026-01-09 00:01:00,447 | INFO     | mean x: 1767906282.0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,447 | INFO     | mean y: 2494356.962099125
[2026-01-09 01:01:50] 2026-01-09 00:01:00,447 | INFO     | intersect: 1523128311.0849307
[2026-01-09 01:01:50] 2026-01-09 00:01:00,448 | INFO     | chi2: 0.8351497289345466
[2026-01-09 01:01:50] 2026-01-09 00:01:00,448 | INFO     | current chi2=0.8351497289345466 (change=2.0371128217763066 %)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,448 | INFO     | left removable region: 20
[2026-01-09 01:01:50] 2026-01-09 00:01:00,449 | INFO     | sum of square deviations: 10352419220.5
[2026-01-09 01:01:50] 2026-01-09 00:01:00,452 | INFO     | sum of deviations: 19329773055.5
[2026-01-09 01:01:50] 2026-01-09 00:01:00,453 | INFO     | mean x: 1767906251.5
[2026-01-09 01:01:50] 2026-01-09 00:01:00,453 | INFO     | mean y: 2498008.717391304
[2026-01-09 01:01:50] 2026-01-09 00:01:00,453 | INFO     | intersect: -3298491440.9007635
[2026-01-09 01:01:50] 2026-01-09 00:01:00,453 | INFO     | chi2: 0.0021759921031893215
[2026-01-09 01:01:50] 2026-01-09 00:01:00,454 | INFO     | current memory leak: 1.87 B/s (using 322 data points, chi2=0.00)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,454 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | ..............................
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . Timing measurements:
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . get job = 0 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . initial setup = 2 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . payload setup = 9 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . stage-in = 0 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . payload execution = 21504 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . stage-out = 3 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | . log creation = 1 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,455 | INFO     | ..............................
[2026-01-09 01:01:50] 2026-01-09 00:01:00,467 | INFO     | time since job start (21657s) is within the limit (174528.0s)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | 
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | job summary report
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | --------------------------------------------------
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | PanDA job id: 6962922886
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | task id: 47898826
[2026-01-09 01:01:50] 2026-01-09 00:01:00,572 | INFO     | errors: (none)
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | pilot state: finished 
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | transexitcode: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | exeerrorcode: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | exeerrordiag: 
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | exitcode: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | exitmsg: OK
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | cpuconsumptiontime: 80507 s
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | nevents: 400
[2026-01-09 01:01:50] 2026-01-09 00:01:00,573 | INFO     | neventsw: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | pid: 21905
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | pgrp: 21905
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | corecount: 8
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | event service: False
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | sizes: {0: 2283140, 1: 2283996, 8: 2284258, 12: 2284286, 21518: 2317636, 21523: 2326634, 21526: 2326818, 21639: 2327012}
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | --------------------------------------------------
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | 
[2026-01-09 01:01:50] 2026-01-09 00:01:00,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 01:01:50] 2026-01-09 00:01:01,148 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:01:50] 2026-01-09 00:01:01,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:01:50] 2026-01-09 00:01:01,151 | INFO     | job 6962922886 has completed (purged errors)
[2026-01-09 01:01:50] 2026-01-09 00:01:01,151 | INFO     | overall cleanup function is called
[2026-01-09 01:01:50] 2026-01-09 00:01:02,159 | INFO     | --- collectZombieJob: --- 10, [21905]
[2026-01-09 01:01:50] 2026-01-09 00:01:02,159 | INFO     | zombie collector waiting for pid 21905
[2026-01-09 01:01:50] 2026-01-09 00:01:02,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:01:50] 2026-01-09 00:01:02,160 | INFO     | collected zombie processes
[2026-01-09 01:01:50] 2026-01-09 00:01:02,160 | INFO     | will attempt to kill all subprocesses of pid=21905
[2026-01-09 01:01:50] 2026-01-09 00:01:02,266 | INFO     | process IDs to be killed: [21905] (in reverse order)
[2026-01-09 01:01:50] 2026-01-09 00:01:03,234 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:01:50] 2026-01-09 00:01:03,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:01:50] 2026-01-09 00:01:03,237 | INFO     | did not find any defunct processes belonging to 21905
[2026-01-09 01:01:50] 2026-01-09 00:01:03,239 | INFO     | did not find any defunct processes belonging to 21905
[2026-01-09 01:01:50] 2026-01-09 00:01:03,239 | INFO     | ready for new job
[2026-01-09 01:01:50] 2026-01-09 00:01:03,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:01:50] 2026-01-09 00:01:03,242 | INFO     | ***************************************
[2026-01-09 01:01:50] 2026-01-09 00:01:03,242 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:01:50] 2026-01-09 00:01:03,242 | INFO     | ***************************************
[2026-01-09 01:01:50] 2026-01-09 00:01:03,242 | INFO     | 
[2026-01-09 01:01:50] 2026-01-09 00:01:03,243 | INFO     | pilot is running in a VM
[2026-01-09 01:01:50] 2026-01-09 00:01:03,243 | INFO     | architecture information:
[2026-01-09 01:01:50] 2026-01-09 00:01:03,254 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:01:50] 2026-01-09 00:01:03,545 | INFO     | cat /etc/os-release:
[2026-01-09 01:01:50] NAME="CentOS Linux"
[2026-01-09 01:01:50] VERSION="7 (Core)"
[2026-01-09 01:01:50] ID="centos"
[2026-01-09 01:01:50] ID_LIKE="rhel fedora"
[2026-01-09 01:01:50] VERSION_ID="7"
[2026-01-09 01:01:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:01:50] ANSI_COLOR="0;31"
[2026-01-09 01:01:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:01:50] HOME_URL="https://www.centos.org/"
[2026-01-09 01:01:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:01:50] 
[2026-01-09 01:01:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:01:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:01:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:01:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:01:50] 
[2026-01-09 01:01:50] 2026-01-09 00:01:03,546 | INFO     | ***************************************
[2026-01-09 01:01:50] 2026-01-09 00:01:04,049 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 01:01:50] 2026-01-09 00:01:04,329 | INFO     | sufficient remaining disk space (496187211776 B)
[2026-01-09 01:01:50] 2026-01-09 00:01:04,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:01:50] 2026-01-09 00:01:04,330 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:01:50] 2026-01-09 00:01:04,330 | INFO     | update_server=False
[2026-01-09 01:01:50] 2026-01-09 00:01:04,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:01:50] 2026-01-09 00:01:04,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:01:50] 2026-01-09 00:01:04,332 | INFO     | aborting loop
[2026-01-09 01:01:50] 2026-01-09 00:01:04,683 | INFO     | all payload control threads have been joined
[2026-01-09 01:01:50] 2026-01-09 00:01:04,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:01:50] 2026-01-09 00:01:04,824 | INFO     | all data control threads have been joined
[2026-01-09 01:01:50] 2026-01-09 00:01:05,336 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,338 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:01:50] 2026-01-09 00:01:05,628 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,689 | INFO     | [payload] control thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,813 | INFO     | all job control threads have been joined
[2026-01-09 01:01:50] 2026-01-09 00:01:05,820 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:05,830 | INFO     | [data] control thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:01:50] 2026-01-09 00:01:06,142 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,388 | INFO     | [job] validate thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,450 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,580 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,597 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,692 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,795 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:06,819 | INFO     | [job] control thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:10,082 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:01:50] 2026-01-09 00:01:33,590 | INFO     | PID=15452 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:01:50] 2026-01-09 00:01:33,590 | INFO     | .. there are 2 such processes running
[2026-01-09 01:01:50] 2026-01-09 00:01:33,590 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:01:50] 2026-01-09 00:01:33,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:01:50] 2026-01-09 00:01:33,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:01:50] 2026-01-09 00:01:40,959 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:01:50] 2026-01-09 00:01:40,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520368985920)>', '<ExcThread(monitor, started 140519678125824)>']
[2026-01-09 01:01:50] 2026-01-09 00:01:41,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:01:50] 2026-01-09 00:01:41,639 | INFO     | [monitor] control thread has ended
[2026-01-09 01:01:50] 2026-01-09 00:01:46,019 | INFO     | all workflow threads have been joined
[2026-01-09 01:01:50] 2026-01-09 00:01:46,019 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:01:50] 2026-01-09 00:01:46,019 | INFO     | traces error code: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:46,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:01:50] 2026-01-09 00:01:46,495 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:01:50] 2026-01-09 00:01:46,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:01:50] 2026-01-09 00:01:46,706 [wrapper] pilotpid: 15452
[2026-01-09 01:01:50] 2026-01-09 00:01:46,810 [wrapper] Pilot exit status: 0
[2026-01-09 01:01:50] 2026-01-09 00:01:47,293 [wrapper] pandaids: 6962922886
[2026-01-09 01:01:50] 2026-01-09 00:01:48,153 [wrapper] cleanup supervisor_pilot 23946 15453
[2026-01-09 01:01:50] 2026-01-09 00:01:48,223 [wrapper] Test setup, not cleaning
[2026-01-09 01:01:50] 2026-01-09 00:01:48,293 [wrapper] apfmon messages muted
[2026-01-09 01:01:50] 2026-01-09 00:01:48,361 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:01:50] 2026-01-09 00:01:48,438 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:01:50]  *** Error codes and diagnostics ***
[2026-01-09 01:01:50]     "exeErrorCode": 0,
[2026-01-09 01:01:50]     "exeErrorDiag": "",
[2026-01-09 01:01:50]     "pilotErrorCode": 0,
[2026-01-09 01:01:50]     "pilotErrorDiag": "",
[2026-01-09 01:01:50]  *** Listing of results directory ***
[2026-01-09 01:01:50] total 437508
[2026-01-09 01:01:50] -rwx------. 1 boinc boinc     36322 Jan  8 09:20 runpilot2-wrapper.sh
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc       100 Jan  8 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:01:50] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 18:59 run_atlas
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc       105 Jan  8 18:59 job.xml
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc      6388 Jan  8 18:59 init_data.xml
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc 221704210 Jan  8 18:59 EVNT.47898824._000857.pool.root.1
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:59 start_atlas.sh
[2026-01-09 01:01:50] drwxrwx--x. 2 boinc boinc        68 Jan  8 18:59 shared
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc    592397 Jan  8 18:59 input.tar.gz
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc         0 Jan  8 18:59 boinc_lockfile
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc      2518 Jan  8 18:59 pandaJob.out
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc    989837 Jan  8 19:00 agis_schedconf.cvmfs.json
[2026-01-09 01:01:50] drwx------. 5 boinc boinc      4096 Jan  8 19:00 pilot3
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc 215450230 Jan  9 00:57 HITS.47898826._022246.pool.root.1
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc       531 Jan  9 00:57 boinc_task_state.xml
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc      1016 Jan  9 00:58 memory_monitor_summary.json
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc   1516240 Jan  9 00:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc    566136 Jan  9 00:59 log.47898826._022246.job.log.tgz.1
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc        95 Jan  9 01:00 pilot_heartbeat.json
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc      7776 Jan  9 01:01 heartbeat.json
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc      8192 Jan  9 01:01 boinc_mmap_file
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc        28 Jan  9 01:01 wrapper_checkpoint.txt
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc      4884 Jan  9 01:01 pilotlog.txt
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc   2911284 Jan  9 01:01 log.47898826._022246.job.log.1
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc       357 Jan  9 01:01 output.list
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc       620 Jan  9 01:01 runtime_log
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc   3491840 Jan  9 01:01 result.tar.gz
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc       657 Jan  9 01:01 yDNODmUR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPteKDmLEgFCo.diag
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc      8817 Jan  9 01:01 runtime_log.err
[2026-01-09 01:01:50] -rw-r--r--. 1 boinc boinc     20741 Jan  9 01:01 stderr.txt
[2026-01-09 01:01:50] HITS file was successfully produced:
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc 215450230 Jan  9 00:57 shared/HITS.pool.root.1
[2026-01-09 01:01:50]  *** Contents of shared directory: ***
[2026-01-09 01:01:50] total 430924
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc 221704210 Jan  8 18:59 ATLAS.root_0
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:59 start_atlas.sh
[2026-01-09 01:01:50] -rw-r--r--. 2 boinc boinc    592397 Jan  8 18:59 input.tar.gz
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc 215450230 Jan  9 00:57 HITS.pool.root.1
[2026-01-09 01:01:50] -rw-------. 1 boinc boinc   3491840 Jan  9 01:01 result.tar.gz
01:01:52 (11720): run_atlas exited; CPU time 80727.756754
01:01:52 (11720): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN