Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:12:38 (1070588): wrapper (7.7.26015): starting
07:12:38 (1070588): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 07:12:38] Arguments: --nthreads 9
[2026-01-08 07:12:38] Threads: 9
[2026-01-08 07:12:38] Checking for CVMFS
[2026-01-08 07:12:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 07:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 07:12:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 07:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 07:12:39] 2.13.3.0 4306 88876 345172 154906 0 269 17124977 32935936 29612 16776704 0 405796607 99.691 318298676 32574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 07:12:39] CVMFS is ok
[2026-01-08 07:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 07:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 07:12:40] Further information can be found at the LHC@home message board.
[2026-01-08 07:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 07:12:40] Checking for apptainer binary...
[2026-01-08 07:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 07:12:40] Running /usr/bin/apptainer --version
[2026-01-08 07:12:40] apptainer version 1.4.5-2.el9
[2026-01-08 07:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 07:12:40] c-6-4.aglt2.org
[2026-01-08 07:12:40] apptainer works
[2026-01-08 07:12:40] Set ATHENA_PROC_NUMBER=9
[2026-01-08 07:12:40] Set ATHENA_CORE_NUMBER=9
[2026-01-08 07:12:41] Starting ATLAS job with PandaID=6962922631
[2026-01-08 07:12:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:11:50]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:11:50] 2026-01-08 22:10:47,011 | INFO     | extracted standard info from prmon json
[2026-01-08 17:11:50] 2026-01-08 22:10:47,011 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:11:50] 2026-01-08 22:10:47,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:11:50] 2026-01-08 22:10:47,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:11:50] 2026-01-08 22:10:47,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:11:50] 2026-01-08 22:10:47,098 | INFO     | time since job start (35837s) is within the limit (174528.0s)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,100 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:11:50] 2026-01-08 22:10:47,120 | INFO     | sum of square deviations: 62083063125.44617
[2026-01-08 17:11:50] 2026-01-08 22:10:47,127 | INFO     | monitor loop #1716: job 0:6962922631 is in state 'finished'
[2026-01-08 17:11:50] 2026-01-08 22:10:47,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,187 | INFO     | sum of deviations: -30512693058.369247
[2026-01-08 17:11:50] 2026-01-08 22:10:47,188 | INFO     | mean x: 1767892333.902564
[2026-01-08 17:11:50] 2026-01-08 22:10:47,188 | INFO     | mean y: 2563792.7128205127
[2026-01-08 17:11:50] 2026-01-08 22:10:47,188 | INFO     | intersect: 871450626.3990781
[2026-01-08 17:11:50] 2026-01-08 22:10:47,189 | INFO     | chi2: 3.29569547604837
[2026-01-08 17:11:50] 2026-01-08 22:10:47,205 | INFO     | sum of square deviations: 60504946579.97249
[2026-01-08 17:11:50] 2026-01-08 22:10:47,245 | INFO     | sum of deviations: 45026840625.12407
[2026-01-08 17:11:50] 2026-01-08 22:10:47,245 | INFO     | mean x: 1767892181.4068966
[2026-01-08 17:11:50] 2026-01-08 22:10:47,246 | INFO     | mean y: 2571054.668965517
[2026-01-08 17:11:50] 2026-01-08 22:10:47,246 | INFO     | intersect: -1313066822.7960846
[2026-01-08 17:11:50] 2026-01-08 22:10:47,247 | INFO     | chi2: 1.9224358573598788
[2026-01-08 17:11:50] 2026-01-08 22:10:47,247 | INFO     | current chi2=1.9224358573598788 (change=41.668279993364784 %)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,263 | INFO     | sum of square deviations: 58953665521.739
[2026-01-08 17:11:50] 2026-01-08 22:10:47,316 | INFO     | sum of deviations: 44485813411.878204
[2026-01-08 17:11:50] 2026-01-08 22:10:47,316 | INFO     | mean x: 1767892028.904348
[2026-01-08 17:11:50] 2026-01-08 22:10:47,316 | INFO     | mean y: 2571001.488695652
[2026-01-08 17:11:50] 2026-01-08 22:10:47,316 | INFO     | intersect: -1331461653.3796446
[2026-01-08 17:11:50] 2026-01-08 22:10:47,317 | INFO     | chi2: 1.9225771040830248
[2026-01-08 17:11:50] 2026-01-08 22:10:47,317 | INFO     | current chi2=1.9225771040830248 (change=-0.0073472788496600034 %)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,317 | INFO     | right removable region: 574
[2026-01-08 17:11:50] 2026-01-08 22:10:47,318 | INFO     | sum of square deviations: 60504695746.33791
[2026-01-08 17:11:50] 2026-01-08 22:10:47,412 | INFO     | sum of deviations: -135910063019.46552
[2026-01-08 17:11:50] 2026-01-08 22:10:47,413 | INFO     | mean x: 1767892486.4103448
[2026-01-08 17:11:50] 2026-01-08 22:10:47,413 | INFO     | mean y: 2573942.577586207
[2026-01-08 17:11:50] 2026-01-08 22:10:47,413 | INFO     | intersect: 3973743060.5416627
[2026-01-08 17:11:50] 2026-01-08 22:10:47,414 | INFO     | chi2: 1.6716676385370821
[2026-01-08 17:11:50] 2026-01-08 22:10:47,414 | INFO     | current chi2=1.6716676385370821 (change=49.277242066628745 %)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,415 | INFO     | sum of square deviations: 58953305617.158226
[2026-01-08 17:11:50] 2026-01-08 22:10:47,496 | INFO     | sum of deviations: -137242828140.79657
[2026-01-08 17:11:50] 2026-01-08 22:10:47,496 | INFO     | mean x: 1767892638.9182608
[2026-01-08 17:11:50] 2026-01-08 22:10:47,496 | INFO     | mean y: 2574072.323478261
[2026-01-08 17:11:50] 2026-01-08 22:10:47,496 | INFO     | intersect: 4118214121.2475734
[2026-01-08 17:11:50] 2026-01-08 22:10:47,497 | INFO     | chi2: 1.6688882819713031
[2026-01-08 17:11:50] 2026-01-08 22:10:47,497 | INFO     | current chi2=1.6688882819713031 (change=0.16626250946697 %)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,497 | INFO     | left removable region: 20
[2026-01-08 17:11:50] 2026-01-08 22:10:47,498 | INFO     | sum of square deviations: 52727450433.6117
[2026-01-08 17:11:50] 2026-01-08 22:10:47,581 | INFO     | sum of deviations: -3450994067.651626
[2026-01-08 17:11:50] 2026-01-08 22:10:47,582 | INFO     | mean x: 1767892608.4277978
[2026-01-08 17:11:50] 2026-01-08 22:10:47,582 | INFO     | mean y: 2575491.146209386
[2026-01-08 17:11:50] 2026-01-08 22:10:47,583 | INFO     | intersect: 118283473.4923527
[2026-01-08 17:11:50] 2026-01-08 22:10:47,583 | INFO     | chi2: 0.12001801421479952
[2026-01-08 17:11:50] 2026-01-08 22:10:47,604 | INFO     | current memory leak: -0.07 B/s (using 554 data points, chi2=0.12)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,605 | INFO     | could have reported an average CPU frequency of 2599 MHz (23 samples)
[2026-01-08 17:11:50] 2026-01-08 22:10:47,605 | INFO     | ..............................
[2026-01-08 17:11:50] 2026-01-08 22:10:47,605 | INFO     | . Timing measurements:
[2026-01-08 17:11:50] 2026-01-08 22:10:47,605 | INFO     | . get job = 0 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . initial setup = 5 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . payload setup = 29 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . stage-in = 0 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . payload execution = 35691 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . stage-out = 6 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | . log creation = 0 s
[2026-01-08 17:11:50] 2026-01-08 22:10:47,606 | INFO     | ..............................
[2026-01-08 17:11:50] 2026-01-08 22:10:48,539 | INFO     | 
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | job summary report
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | --------------------------------------------------
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | PanDA job id: 6962922631
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | task id: 47898826
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | errors: (none)
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | pilot state: finished 
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | transexitcode: 0
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | exeerrorcode: 0
[2026-01-08 17:11:50] 2026-01-08 22:10:48,540 | INFO     | exeerrordiag: 
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | exitcode: 0
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | exitmsg: OK
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | cpuconsumptiontime: 74022 s
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | nevents: 400
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | neventsw: 0
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | pid: 1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | pgrp: 1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | corecount: 9
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | event service: False
[2026-01-08 17:11:50] 2026-01-08 22:10:48,541 | INFO     | sizes: {0: 2283797, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 25: 2284370, 35: 2284526, 35725: 2324089, 35732: 2333087, 35737: 2333143, 35782: 2333337}
[2026-01-08 17:11:50] 2026-01-08 22:10:48,542 | INFO     | --------------------------------------------------
[2026-01-08 17:11:50] 2026-01-08 22:10:48,542 | INFO     | 
[2026-01-08 17:11:50] 2026-01-08 22:10:48,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 17:11:50] 2026-01-08 22:10:48,683 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,745 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | job 6962922631 has completed (purged errors)
[2026-01-08 17:11:50] 2026-01-08 22:10:48,747 | INFO     | overall cleanup function is called
[2026-01-08 17:11:50] 2026-01-08 22:10:49,780 | INFO     | --- collectZombieJob: --- 10, [1090024]
[2026-01-08 17:11:50] 2026-01-08 22:10:49,780 | INFO     | zombie collector waiting for pid 1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:49,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:11:50] 2026-01-08 22:10:49,780 | INFO     | collected zombie processes
[2026-01-08 17:11:50] 2026-01-08 22:10:49,780 | INFO     | will attempt to kill all subprocesses of pid=1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:54,628 | INFO     | process IDs to be killed: [1090024] (in reverse order)
[2026-01-08 17:11:50] 2026-01-08 22:10:56,151 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:11:50] 2026-01-08 22:10:56,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:11:50] 2026-01-08 22:10:56,316 | INFO     | did not find any defunct processes belonging to 1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:56,454 | INFO     | did not find any defunct processes belonging to 1090024
[2026-01-08 17:11:50] 2026-01-08 22:10:56,455 | INFO     | ready for new job
[2026-01-08 17:11:50] 2026-01-08 22:10:56,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:11:50] 2026-01-08 22:10:56,459 | INFO     | ***************************************
[2026-01-08 17:11:50] 2026-01-08 22:10:56,459 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:11:50] 2026-01-08 22:10:56,459 | INFO     | ***************************************
[2026-01-08 17:11:50] 2026-01-08 22:10:56,459 | INFO     | 
[2026-01-08 17:11:50] 2026-01-08 22:10:56,508 | INFO     | architecture information:
[2026-01-08 17:11:50] 2026-01-08 22:10:56,516 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:11:50] 2026-01-08 22:10:56,621 | INFO     | cat /etc/os-release:
[2026-01-08 17:11:50] NAME="CentOS Linux"
[2026-01-08 17:11:50] VERSION="7 (Core)"
[2026-01-08 17:11:50] ID="centos"
[2026-01-08 17:11:50] ID_LIKE="rhel fedora"
[2026-01-08 17:11:50] VERSION_ID="7"
[2026-01-08 17:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:11:50] ANSI_COLOR="0;31"
[2026-01-08 17:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:11:50] HOME_URL="https://www.centos.org/"
[2026-01-08 17:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:11:50] 
[2026-01-08 17:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:11:50] 
[2026-01-08 17:11:50] 2026-01-08 22:10:56,621 | INFO     | ***************************************
[2026-01-08 17:11:50] 2026-01-08 22:10:57,125 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 17:11:50] 2026-01-08 22:10:57,218 | INFO     | sufficient remaining disk space (75651612672 B)
[2026-01-08 17:11:50] 2026-01-08 22:10:57,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:11:50] 2026-01-08 22:10:57,219 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:11:50] 2026-01-08 22:10:57,219 | INFO     | update_server=False
[2026-01-08 17:11:50] 2026-01-08 22:10:57,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:11:50] 2026-01-08 22:10:57,467 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:11:50] 2026-01-08 22:10:57,467 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:11:50] 2026-01-08 22:10:57,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:11:50] 2026-01-08 22:10:57,467 | INFO     | will abort loop
[2026-01-08 17:11:50] 2026-01-08 22:10:57,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:11:50] 2026-01-08 22:10:57,500 | INFO     | all job control threads have been joined
[2026-01-08 17:11:50] 2026-01-08 22:10:57,674 | INFO     | all payload control threads have been joined
[2026-01-08 17:11:50] 2026-01-08 22:10:57,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:11:50] 2026-01-08 22:10:57,929 | INFO     | all data control threads have been joined
[2026-01-08 17:11:50] 2026-01-08 22:10:58,225 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,492 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,493 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,510 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,510 | INFO     | [job] control thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,532 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,680 | INFO     | [payload] control thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,701 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,804 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:58,935 | INFO     | [data] control thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:59,088 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:59,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:11:50] 2026-01-08 22:10:59,103 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:59,108 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:59,109 | INFO     | [job] validate thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:10:59,516 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:11:03,165 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:11:50] 2026-01-08 22:11:25,378 | INFO     | PID=1081593 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:11:50] 2026-01-08 22:11:25,379 | INFO     | .. there are 42 such processes running
[2026-01-08 17:11:50] 2026-01-08 22:11:25,379 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:11:50] 2026-01-08 22:11:25,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:11:50] 2026-01-08 22:11:25,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:11:50] 2026-01-08 22:11:42,505 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:11:50] 2026-01-08 22:11:42,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275934123840)>', '<ExcThread(monitor, started 140275309606656)>']
[2026-01-08 17:11:50] 2026-01-08 22:11:43,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:11:50] 2026-01-08 22:11:43,596 | INFO     | [monitor] control thread has ended
[2026-01-08 17:11:50] 2026-01-08 22:11:47,766 | INFO     | all workflow threads have been joined
[2026-01-08 17:11:50] 2026-01-08 22:11:47,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:11:50] 2026-01-08 22:11:47,770 | INFO     | traces error code: 0
[2026-01-08 17:11:50] 2026-01-08 22:11:47,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:11:50] 2026-01-08 22:11:48,325 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:11:50] 2026-01-08 22:11:48,382 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:11:50] 2026-01-08 22:11:48,434 [wrapper] pilotpid: 1081593
[2026-01-08 17:11:50] 2026-01-08 22:11:48,476 [wrapper] Pilot exit status: 0
[2026-01-08 17:11:50] 2026-01-08 22:11:48,647 [wrapper] pandaids: 6962922631
[2026-01-08 17:11:50] 2026-01-08 22:11:49,044 [wrapper] cleanup supervisor_pilot  481658 1081594
[2026-01-08 17:11:50] 2026-01-08 22:11:49,079 [wrapper] Test setup, not cleaning
[2026-01-08 17:11:50] 2026-01-08 22:11:49,122 [wrapper] apfmon messages muted
[2026-01-08 17:11:50] 2026-01-08 22:11:49,144 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:11:50] 2026-01-08 22:11:49,161 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:11:50]  *** Error codes and diagnostics ***
[2026-01-08 17:11:50]     "exeErrorCode": 0,
[2026-01-08 17:11:50]     "exeErrorDiag": "",
[2026-01-08 17:11:50]     "pilotErrorCode": 0,
[2026-01-08 17:11:50]     "pilotErrorDiag": "",
[2026-01-08 17:11:50]  *** Listing of results directory ***
[2026-01-08 17:11:50] total 454520
[2026-01-08 17:11:50] -rwx------. 1 boincer umatlas     36322 Jan  8 03:20 runpilot2-wrapper.sh
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:23 queuedata.json
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas       100 Jan  8 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:11:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 07:12 run_atlas
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas       105 Jan  8 07:12 job.xml
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas 227393760 Jan  8 07:12 EVNT.47898824._000848.pool.root.1
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 07:12 start_atlas.sh
[2026-01-08 17:11:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 07:12 shared
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas    592401 Jan  8 07:12 input.tar.gz
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas         0 Jan  8 07:12 boinc_lockfile
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 07:12 pandaJob.out
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas        57 Jan  8 07:12 setup.sh.local
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas    989835 Jan  8 07:13 agis_schedconf.cvmfs.json
[2026-01-08 17:11:50] drwx------. 5 boincer umatlas      4096 Jan  8 07:13 pilot3
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas 224996556 Jan  8 17:07 HITS.47898826._022066.pool.root.1
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas       531 Jan  8 17:07 boinc_task_state.xml
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas      1051 Jan  8 17:09 memory_monitor_summary.json
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas      6658 Jan  8 17:09 init_data.xml
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas   1516240 Jan  8 17:09 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas    703153 Jan  8 17:09 log.47898826._022066.job.log.tgz.1
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas        95 Jan  8 17:10 pilot_heartbeat.json
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas      7826 Jan  8 17:10 heartbeat.json
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 17:11 boinc_mmap_file
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas        28 Jan  8 17:11 wrapper_checkpoint.txt
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas      5010 Jan  8 17:11 pilotlog.txt
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas   3856911 Jan  8 17:11 log.47898826._022066.job.log.1
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas       357 Jan  8 17:11 output.list
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas       620 Jan  8 17:11 runtime_log
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas   4577280 Jan  8 17:11 result.tar.gz
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas      9328 Jan  8 17:11 runtime_log.err
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas       657 Jan  8 17:11 01hMDmIR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFseKDm4OYMIo.diag
[2026-01-08 17:11:50] -rw-r--r--. 1 boincer umatlas     21195 Jan  8 17:11 stderr.txt
[2026-01-08 17:11:50] HITS file was successfully produced:
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas 224996556 Jan  8 17:07 shared/HITS.pool.root.1
[2026-01-08 17:11:50]  *** Contents of shared directory: ***
[2026-01-08 17:11:50] total 446868
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas 227393760 Jan  8 07:12 ATLAS.root_0
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 07:12 start_atlas.sh
[2026-01-08 17:11:50] -rw-r--r--. 2 boincer umatlas    592401 Jan  8 07:12 input.tar.gz
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas 224996556 Jan  8 17:07 HITS.pool.root.1
[2026-01-08 17:11:50] -rw-------. 1 boincer umatlas   4577280 Jan  8 17:11 result.tar.gz
17:11:52 (1070588): run_atlas exited; CPU time 75369.209325
17:11:52 (1070588): called boinc_finish(0)

</stderr_txt>
]]>

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