Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:20:54 (3228550): wrapper (7.7.26015): starting
11:20:54 (3228550): wrapper: running run_atlas (--nthreads 11)
[2026-01-08 11:20:54] Arguments: --nthreads 11
[2026-01-08 11:20:54] Threads: 11
[2026-01-08 11:20:54] Checking for CVMFS
[2026-01-08 11:20:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:20:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:20:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:20:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:20:55] 2.13.3.0 11414 92156 167980 154914 0 277 16901655 25181184 28244 16776704 0 504295770 99.582 523026772 26309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 11:20:55] CVMFS is ok
[2026-01-08 11:20:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:20:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:20:55] Further information can be found at the LHC@home message board.
[2026-01-08 11:20:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:20:55] Checking for apptainer binary...
[2026-01-08 11:20:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:20:55] Running /usr/bin/apptainer --version
[2026-01-08 11:20:57] apptainer version 1.4.5-2.el9
[2026-01-08 11:20:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:20:58] c-16-34.aglt2.org
[2026-01-08 11:20:58] apptainer works
[2026-01-08 11:20:58] Set ATHENA_PROC_NUMBER=11
[2026-01-08 11:20:58] Set ATHENA_CORE_NUMBER=11
[2026-01-08 11:20:58] Starting ATLAS job with PandaID=6962922625
[2026-01-08 11:20:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:44:03]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:44:03] 2026-01-09 03:42:56,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:44:03] 2026-01-09 03:42:57,956 | INFO     | time since job start (40876s) is within the limit (174528.0s)
[2026-01-08 22:44:03] 2026-01-09 03:42:59,328 | INFO     | monitor loop #2257: job 0:6962922625 is in state 'finished'
[2026-01-08 22:44:03] 2026-01-09 03:42:59,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:44:03] 2026-01-09 03:42:59,965 | INFO     | time since job start (40878s) is within the limit (174528.0s)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,133 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 22:44:03] 2026-01-09 03:43:00,150 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2849.9840208333335
[2026-01-08 22:44:03] 2026-01-09 03:43:00,173 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962922625/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,174 | INFO     | extracted standard info from prmon json
[2026-01-08 22:44:03] 2026-01-09 03:43:00,174 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 22:44:03] 2026-01-09 03:43:00,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 22:44:03] 2026-01-09 03:43:00,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 22:44:03] 2026-01-09 03:43:00,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 22:44:03] 2026-01-09 03:43:00,204 | INFO     | fitting pss+swap vs Time
[2026-01-08 22:44:03] 2026-01-09 03:43:00,206 | INFO     | sum of square deviations: 92430231963.73662
[2026-01-08 22:44:03] 2026-01-09 03:43:00,221 | INFO     | sum of deviations: 107276304592.4251
[2026-01-08 22:44:03] 2026-01-09 03:43:00,221 | INFO     | mean x: 1767909750.245509
[2026-01-08 22:44:03] 2026-01-09 03:43:00,221 | INFO     | mean y: 2661175.0583832334
[2026-01-08 22:44:03] 2026-01-09 03:43:00,221 | INFO     | intersect: -2049208876.870764
[2026-01-08 22:44:03] 2026-01-09 03:43:00,223 | INFO     | chi2: 4.122543282172676
[2026-01-08 22:44:03] 2026-01-09 03:43:00,224 | INFO     | sum of square deviations: 90370382435.93674
[2026-01-08 22:44:03] 2026-01-09 03:43:00,238 | INFO     | sum of deviations: 154471030862.26254
[2026-01-08 22:44:03] 2026-01-09 03:43:00,238 | INFO     | mean x: 1767909597.7511313
[2026-01-08 22:44:03] 2026-01-09 03:43:00,238 | INFO     | mean y: 2664647.3167420817
[2026-01-08 22:44:03] 2026-01-09 03:43:00,239 | INFO     | intersect: -3019241542.2415276
[2026-01-08 22:44:03] 2026-01-09 03:43:00,240 | INFO     | chi2: 3.3310997678232384
[2026-01-08 22:44:03] 2026-01-09 03:43:00,240 | INFO     | current chi2=3.3310997678232384 (change=19.19794311855783 %)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,240 | INFO     | right removable region: 662
[2026-01-08 22:44:03] 2026-01-09 03:43:00,241 | INFO     | sum of square deviations: 90370078655.93666
[2026-01-08 22:44:03] 2026-01-09 03:43:00,255 | INFO     | sum of deviations: -76987986653.2172
[2026-01-08 22:44:03] 2026-01-09 03:43:00,256 | INFO     | mean x: 1767909902.7511313
[2026-01-08 22:44:03] 2026-01-09 03:43:00,256 | INFO     | mean y: 2674800.28959276
[2026-01-08 22:44:03] 2026-01-09 03:43:00,257 | INFO     | intersect: 1508790829.194402
[2026-01-08 22:44:03] 2026-01-09 03:43:00,258 | INFO     | chi2: 1.575950547275819
[2026-01-08 22:44:03] 2026-01-09 03:43:00,258 | INFO     | current chi2=1.575950547275819 (change=61.77237109696865 %)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,259 | INFO     | sum of square deviations: 88340803335.1064
[2026-01-08 22:44:03] 2026-01-09 03:43:00,274 | INFO     | sum of deviations: -130998421061.9151
[2026-01-08 22:44:03] 2026-01-09 03:43:00,274 | INFO     | mean x: 1767910055.255319
[2026-01-08 22:44:03] 2026-01-09 03:43:00,274 | INFO     | mean y: 2678854.6185410335
[2026-01-08 22:44:03] 2026-01-09 03:43:00,274 | INFO     | intersect: 2624269524.780528
[2026-01-08 22:44:03] 2026-01-09 03:43:00,275 | INFO     | chi2: 1.342853301764662
[2026-01-08 22:44:03] 2026-01-09 03:43:00,276 | INFO     | current chi2=1.342853301764662 (change=14.790898478006682 %)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,276 | INFO     | left removable region: 20
[2026-01-08 22:44:03] 2026-01-09 03:43:00,277 | INFO     | sum of square deviations: 82051918717.29742
[2026-01-08 22:44:03] 2026-01-09 03:43:00,291 | INFO     | sum of deviations: -110682275976.7803
[2026-01-08 22:44:03] 2026-01-09 03:43:00,291 | INFO     | mean x: 1767910177.2725856
[2026-01-08 22:44:03] 2026-01-09 03:43:00,291 | INFO     | mean y: 2684700.4158878503
[2026-01-08 22:44:03] 2026-01-09 03:43:00,291 | INFO     | intersect: 2387471372.0990725
[2026-01-08 22:44:03] 2026-01-09 03:43:00,292 | INFO     | chi2: 0.49102206043246716
[2026-01-08 22:44:03] 2026-01-09 03:43:00,293 | INFO     | current memory leak: -1.35 B/s (using 642 data points, chi2=0.49)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,293 | INFO     | could have reported an average CPU frequency of 2767 MHz (26 samples)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | ..............................
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . Timing measurements:
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . get job = 0 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . initial setup = 3 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . payload setup = 29 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . stage-in = 0 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,294 | INFO     | . payload execution = 40758 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,295 | INFO     | . stage-out = 5 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,295 | INFO     | . log creation = 1 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,295 | INFO     | ..............................
[2026-01-08 22:44:03] 2026-01-09 03:43:00,415 | INFO     | 
[2026-01-08 22:44:03] 2026-01-09 03:43:00,415 | INFO     | job summary report
[2026-01-08 22:44:03] 2026-01-09 03:43:00,415 | INFO     | --------------------------------------------------
[2026-01-08 22:44:03] 2026-01-09 03:43:00,415 | INFO     | PanDA job id: 6962922625
[2026-01-08 22:44:03] 2026-01-09 03:43:00,415 | INFO     | task id: 47898826
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | errors: (none)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | pilot state: finished 
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | transexitcode: 0
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | exeerrorcode: 0
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | exeerrordiag: 
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | exitcode: 0
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | exitmsg: OK
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | cpuconsumptiontime: 78599 s
[2026-01-08 22:44:03] 2026-01-09 03:43:00,416 | INFO     | nevents: 400
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | neventsw: 0
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | pid: 3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | pgrp: 3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | corecount: 11
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | event service: False
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2283853, 3: 2284024, 4: 2284052, 15: 2284080, 26: 2284236, 33: 2284526, 37: 2284582, 40791: 2327149, 40798: 2336147, 40801: 2336
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | --------------------------------------------------
[2026-01-08 22:44:03] 2026-01-09 03:43:00,417 | INFO     | 
[2026-01-08 22:44:03] 2026-01-09 03:43:00,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 22:44:03] 2026-01-09 03:43:00,515 | INFO     | job 6962922625 has completed (purged errors)
[2026-01-08 22:44:03] 2026-01-09 03:43:00,563 | INFO     | overall cleanup function is called
[2026-01-08 22:44:03] 2026-01-09 03:43:01,595 | INFO     | --- collectZombieJob: --- 10, [3258414]
[2026-01-08 22:44:03] 2026-01-09 03:43:01,595 | INFO     | zombie collector waiting for pid 3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:01,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 22:44:03] 2026-01-09 03:43:01,595 | INFO     | collected zombie processes
[2026-01-08 22:44:03] 2026-01-09 03:43:01,595 | INFO     | will attempt to kill all subprocesses of pid=3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:02,588 | INFO     | PID=3237151 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 22:44:03] 2026-01-09 03:43:02,588 | INFO     | .. there are 44 such processes running
[2026-01-08 22:44:03] 2026-01-09 03:43:03,004 | INFO     | process IDs to be killed: [3258414] (in reverse order)
[2026-01-08 22:44:03] 2026-01-09 03:43:03,171 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 22:44:03] 2026-01-09 03:43:03,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 22:44:03] 2026-01-09 03:43:03,243 | INFO     | did not find any defunct processes belonging to 3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:03,283 | INFO     | did not find any defunct processes belonging to 3258414
[2026-01-08 22:44:03] 2026-01-09 03:43:03,283 | INFO     | ready for new job
[2026-01-08 22:44:03] 2026-01-09 03:43:03,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:44:03] 2026-01-09 03:43:03,286 | INFO     | ***************************************
[2026-01-08 22:44:03] 2026-01-09 03:43:03,286 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:44:03] 2026-01-09 03:43:03,286 | INFO     | ***************************************
[2026-01-08 22:44:03] 2026-01-09 03:43:03,286 | INFO     | 
[2026-01-08 22:44:03] 2026-01-09 03:43:03,333 | INFO     | architecture information:
[2026-01-08 22:44:03] 2026-01-09 03:43:03,347 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:44:03] 2026-01-09 03:43:03,483 | INFO     | cat /etc/os-release:
[2026-01-08 22:44:03] NAME="CentOS Linux"
[2026-01-08 22:44:03] VERSION="7 (Core)"
[2026-01-08 22:44:03] ID="centos"
[2026-01-08 22:44:03] ID_LIKE="rhel fedora"
[2026-01-08 22:44:03] VERSION_ID="7"
[2026-01-08 22:44:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:44:03] ANSI_COLOR="0;31"
[2026-01-08 22:44:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:44:03] HOME_URL="https://www.centos.org/"
[2026-01-08 22:44:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:44:03] 
[2026-01-08 22:44:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:44:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:44:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:44:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:44:03] 
[2026-01-08 22:44:03] 2026-01-09 03:43:03,484 | INFO     | ***************************************
[2026-01-08 22:44:03] 2026-01-09 03:43:03,987 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 22:44:03] 2026-01-09 03:43:04,048 | INFO     | sufficient remaining disk space (63748177920 B)
[2026-01-08 22:44:03] 2026-01-09 03:43:04,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:44:03] 2026-01-09 03:43:04,053 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:44:03] 2026-01-09 03:43:04,053 | INFO     | update_server=False
[2026-01-08 22:44:03] 2026-01-09 03:43:04,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:44:03] 2026-01-09 03:43:04,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:44:03] 2026-01-09 03:43:04,356 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 22:44:03] 2026-01-09 03:43:04,357 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 22:44:03] 2026-01-09 03:43:04,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:44:03] 2026-01-09 03:43:04,357 | INFO     | will abort loop
[2026-01-08 22:44:03] 2026-01-09 03:43:04,519 | INFO     | all data control threads have been joined
[2026-01-08 22:44:03] 2026-01-09 03:43:05,061 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,062 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,105 | INFO     | [job] validate thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,353 | INFO     | all payload control threads have been joined
[2026-01-08 22:44:03] 2026-01-09 03:43:05,360 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,370 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:44:03] 2026-01-09 03:43:05,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:44:03] 2026-01-09 03:43:05,453 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,529 | INFO     | [data] control thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,660 | INFO     | all job control threads have been joined
[2026-01-08 22:44:03] 2026-01-09 03:43:05,770 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,787 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:05,797 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:06,106 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:06,359 | INFO     | [payload] control thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:06,439 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:06,668 | INFO     | [job] control thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:09,406 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:44:03] 2026-01-09 03:43:36,514 | INFO     | PID=3237151 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 22:44:03] 2026-01-09 03:43:36,514 | INFO     | .. there are 45 such processes running
[2026-01-08 22:44:03] 2026-01-09 03:43:36,515 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:44:03] 2026-01-09 03:43:36,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:44:03] 2026-01-09 03:43:36,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:44:03] 2026-01-09 03:43:54,338 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:44:03] 2026-01-09 03:43:56,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478596200256)>', '<ExcThread(monitor, started 140477969983232)>']
[2026-01-08 22:44:03] 2026-01-09 03:43:56,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:44:03] 2026-01-09 03:43:56,650 | INFO     | [monitor] control thread has ended
[2026-01-08 22:44:03] 2026-01-09 03:44:01,314 | INFO     | all workflow threads have been joined
[2026-01-08 22:44:03] 2026-01-09 03:44:01,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:44:03] 2026-01-09 03:44:01,314 | INFO     | traces error code: 0
[2026-01-08 22:44:03] 2026-01-09 03:44:01,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:44:03] 2026-01-09 03:44:02,238 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:44:03] 2026-01-09 03:44:02,250 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:44:03] 2026-01-09 03:44:02,255 [wrapper] pilotpid: 3237151
[2026-01-08 22:44:03] 2026-01-09 03:44:02,270 [wrapper] Pilot exit status: 0
[2026-01-08 22:44:03] 2026-01-09 03:44:02,355 [wrapper] pandaids: 6962922625
[2026-01-08 22:44:03] 2026-01-09 03:44:02,468 [wrapper] cleanup supervisor_pilot 2572981 3237152
[2026-01-08 22:44:03] 2026-01-09 03:44:02,481 [wrapper] Test setup, not cleaning
[2026-01-08 22:44:03] 2026-01-09 03:44:02,485 [wrapper] apfmon messages muted
[2026-01-08 22:44:03] 2026-01-09 03:44:02,492 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:44:03] 2026-01-09 03:44:02,518 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:44:03]  *** Error codes and diagnostics ***
[2026-01-08 22:44:03]     "exeErrorCode": 0,
[2026-01-08 22:44:03]     "exeErrorDiag": "",
[2026-01-08 22:44:03]     "pilotErrorCode": 0,
[2026-01-08 22:44:03]     "pilotErrorDiag": "",
[2026-01-08 22:44:03]  *** Listing of results directory ***
[2026-01-08 22:44:03] total 459324
[2026-01-08 22:44:03] -rwx------. 1 boincer umatlas     36322 Jan  8 03:20 runpilot2-wrapper.sh
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:23 queuedata.json
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas       100 Jan  8 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:44:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 11:20 run_atlas
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas       105 Jan  8 11:20 job.xml
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas 227393760 Jan  8 11:20 EVNT.47898824._000848.pool.root.1
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:20 start_atlas.sh
[2026-01-08 22:44:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 11:20 shared
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 11:20 input.tar.gz
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas         0 Jan  8 11:20 boinc_lockfile
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 11:20 pandaJob.out
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas        57 Jan  8 11:20 setup.sh.local
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas    989837 Jan  8 11:21 agis_schedconf.cvmfs.json
[2026-01-08 22:44:03] drwx------. 5 boincer umatlas      4096 Jan  8 11:21 pilot3
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas      6612 Jan  8 22:36 init_data.xml
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas 227729151 Jan  8 22:41 HITS.47898826._022060.pool.root.1
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas       531 Jan  8 22:41 boinc_task_state.xml
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas      1069 Jan  8 22:42 memory_monitor_summary.json
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas   1516240 Jan  8 22:42 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas    820228 Jan  8 22:42 log.47898826._022060.job.log.tgz.1
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas      7848 Jan  8 22:43 heartbeat.json
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas        95 Jan  8 22:43 pilot_heartbeat.json
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 22:43 boinc_mmap_file
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas        28 Jan  8 22:44 wrapper_checkpoint.txt
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas      5010 Jan  8 22:44 pilotlog.txt
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas   4836117 Jan  8 22:44 log.47898826._022060.job.log.1
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas       357 Jan  8 22:44 output.list
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas       620 Jan  8 22:44 runtime_log
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas   5672960 Jan  8 22:44 result.tar.gz
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas      9340 Jan  8 22:44 runtime_log.err
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas       661 Jan  8 22:44 PuZMDmIR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9reKDmbnOdkm.diag
[2026-01-08 22:44:03] -rw-r--r--. 1 boincer umatlas     21511 Jan  8 22:44 stderr.txt
[2026-01-08 22:44:03] HITS file was successfully produced:
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas 227729151 Jan  8 22:41 shared/HITS.pool.root.1
[2026-01-08 22:44:03]  *** Contents of shared directory: ***
[2026-01-08 22:44:03] total 450600
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas 227393760 Jan  8 11:20 ATLAS.root_0
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:20 start_atlas.sh
[2026-01-08 22:44:03] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 11:20 input.tar.gz
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas 227729151 Jan  8 22:41 HITS.pool.root.1
[2026-01-08 22:44:03] -rw-------. 1 boincer umatlas   5672960 Jan  8 22:44 result.tar.gz
22:44:05 (3228550): run_atlas exited; CPU time 80757.507132
22:44:05 (3228550): called boinc_finish(0)

</stderr_txt>
]]>

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