Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:26:51 (1879990): wrapper (7.7.26015): starting
00:26:51 (1879990): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 00:26:52] Arguments: --nthreads 4
[2026-01-10 00:26:52] Threads: 4
[2026-01-10 00:26:52] Checking for CVMFS
[2026-01-10 00:26:52] No cvmfs_config command found, will try listing directly
[2026-01-10 00:26:52] CVMFS is ok
[2026-01-10 00:26:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:26:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:26:52] Further information can be found at the LHC@home message board.
[2026-01-10 00:26:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:26:52] Checking for apptainer binary...
[2026-01-10 00:26:52] which: no apptainer in ((null))
[2026-01-10 00:26:52] apptainer is not installed, using version from CVMFS
[2026-01-10 00:26:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:26:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-01-10 00:26:52] apptainer works
[2026-01-10 00:26:52] Set ATHENA_PROC_NUMBER=4
[2026-01-10 00:26:52] Set ATHENA_CORE_NUMBER=4
[2026-01-10 00:26:52] Starting ATLAS job with PandaID=6962922566
[2026-01-10 00:26:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:19:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:19:19] 2026-01-10 03:17:59,073 | INFO     | time since job start (13851s) is within the limit (174528.0s)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,349 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 04:19:19] 2026-01-10 03:17:59,372 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2669.1234062499984
[2026-01-10 04:19:19] 2026-01-10 03:17:59,397 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962922566/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,398 | INFO     | extracted standard info from prmon json
[2026-01-10 04:19:19] 2026-01-10 03:17:59,399 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:19:19] 2026-01-10 03:17:59,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:19:19] 2026-01-10 03:17:59,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:19:19] 2026-01-10 03:17:59,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:19:19] 2026-01-10 03:17:59,404 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:19:19] 2026-01-10 03:17:59,404 | INFO     | sum of square deviations: 3627000098.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,406 | INFO     | sum of deviations: -24269174581.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,406 | INFO     | mean x: 1768008155.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,406 | INFO     | mean y: 2347922.7356828195
[2026-01-10 04:19:19] 2026-01-10 03:17:59,406 | INFO     | intersect: 11832537449.884327
[2026-01-10 04:19:19] 2026-01-10 03:17:59,407 | INFO     | chi2: 2.040519702788555
[2026-01-10 04:19:19] 2026-01-10 03:17:59,407 | INFO     | sum of square deviations: 3392567795.5
[2026-01-10 04:19:19] 2026-01-10 03:17:59,409 | INFO     | sum of deviations: -10753748590.500002
[2026-01-10 04:19:19] 2026-01-10 03:17:59,409 | INFO     | mean x: 1768008002.5
[2026-01-10 04:19:19] 2026-01-10 03:17:59,409 | INFO     | mean y: 2356562.8603603602
[2026-01-10 04:19:19] 2026-01-10 03:17:59,409 | INFO     | intersect: 5606581654.57293
[2026-01-10 04:19:19] 2026-01-10 03:17:59,409 | INFO     | chi2: 1.3817075184369354
[2026-01-10 04:19:19] 2026-01-10 03:17:59,410 | INFO     | current chi2=1.3817075184369354 (change=32.28648973353667 %)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,410 | INFO     | sum of square deviations: 3168461268.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | sum of deviations: -10433489349.000002
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | mean x: 1768007850.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | mean y: 2356781.073732719
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | intersect: 5824265118.16608
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | chi2: 1.380967359015736
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | current chi2=1.380967359015736 (change=0.05356845868774205 %)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,412 | INFO     | right removable region: 216
[2026-01-10 04:19:19] 2026-01-10 03:17:59,413 | INFO     | sum of square deviations: 3392567795.5
[2026-01-10 04:19:19] 2026-01-10 03:17:59,414 | INFO     | sum of deviations: -49677177834.500015
[2026-01-10 04:19:19] 2026-01-10 03:17:59,415 | INFO     | mean x: 1768008307.5
[2026-01-10 04:19:19] 2026-01-10 03:17:59,415 | INFO     | mean y: 2364220.761261261
[2026-01-10 04:19:19] 2026-01-10 03:17:59,415 | INFO     | intersect: 25891209602.43667
[2026-01-10 04:19:19] 2026-01-10 03:17:59,415 | INFO     | chi2: 0.7867869059636046
[2026-01-10 04:19:19] 2026-01-10 03:17:59,415 | INFO     | current chi2=0.7867869059636046 (change=61.44183734720185 %)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,416 | INFO     | sum of square deviations: 3168461268.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,417 | INFO     | sum of deviations: -45744482550.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,417 | INFO     | mean x: 1768008460.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,417 | INFO     | mean y: 2361541.580645161
[2026-01-10 04:19:19] 2026-01-10 03:17:59,418 | INFO     | intersect: 25527884912.669044
[2026-01-10 04:19:19] 2026-01-10 03:17:59,418 | INFO     | chi2: 0.7858565691698116
[2026-01-10 04:19:19] 2026-01-10 03:17:59,418 | INFO     | current chi2=0.7858565691698116 (change=0.11824507839940941 %)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,418 | INFO     | left removable region: 20
[2026-01-10 04:19:19] 2026-01-10 03:17:59,418 | INFO     | sum of square deviations: 2334722845.0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,420 | INFO     | sum of deviations: -22605830210.500004
[2026-01-10 04:19:19] 2026-01-10 03:17:59,420 | INFO     | mean x: 1768008429.5
[2026-01-10 04:19:19] 2026-01-10 03:17:59,420 | INFO     | mean y: 2364442.535714286
[2026-01-10 04:19:19] 2026-01-10 03:17:59,420 | INFO     | intersect: 17121012359.826199
[2026-01-10 04:19:19] 2026-01-10 03:17:59,420 | INFO     | chi2: 0.09806892468935162
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | current memory leak: -9.68 B/s (using 196 data points, chi2=0.10)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | could have reported an average CPU frequency of 2694 MHz (11 samples)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | ..............................
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | . Timing measurements:
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | . get job = 0 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | . initial setup = 1 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,421 | INFO     | . payload setup = 8 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,422 | INFO     | . stage-in = 0 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,422 | INFO     | . payload execution = 13810 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,422 | INFO     | . stage-out = 1 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,422 | INFO     | . log creation = 0 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,422 | INFO     | ..............................
[2026-01-10 04:19:19] 2026-01-10 03:17:59,522 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 03:17:59,523 | INFO     | job summary report
[2026-01-10 04:19:19] 2026-01-10 03:17:59,523 | INFO     | --------------------------------------------------
[2026-01-10 04:19:19] 2026-01-10 03:17:59,523 | INFO     | PanDA job id: 6962922566
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | task id: 47898826
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | errors: (none)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | pilot state: finished 
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | transexitcode: 0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | exeerrorcode: 0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | exeerrordiag: 
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | exitcode: 0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | exitmsg: OK
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | cpuconsumptiontime: 53334 s
[2026-01-10 04:19:19] 2026-01-10 03:17:59,524 | INFO     | nevents: 400
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | neventsw: 0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | pid: 1891942
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | pgrp: 1891942
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | corecount: 4
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | event service: False
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | sizes: {0: 2283978, 7: 2284240, 11: 2284268, 13823: 2315293, 13825: 2324371, 13834: 2324509}
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | --------------------------------------------------
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 03:17:59,525 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-10 04:19:19] 2026-01-10 03:17:59,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 03:17:59,560 | INFO     | job 6962922566 has completed (purged errors)
[2026-01-10 04:19:19] 2026-01-10 03:17:59,561 | INFO     | overall cleanup function is called
[2026-01-10 04:19:19] 2026-01-10 03:18:00,569 | INFO     | --- collectZombieJob: --- 10, [1891942]
[2026-01-10 04:19:19] 2026-01-10 03:18:00,570 | INFO     | zombie collector waiting for pid 1891942
[2026-01-10 04:19:19] 2026-01-10 03:18:00,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:19:19] 2026-01-10 03:18:00,570 | INFO     | collected zombie processes
[2026-01-10 04:19:19] 2026-01-10 03:18:00,570 | INFO     | will attempt to kill all subprocesses of pid=1891942
[2026-01-10 04:19:19] 2026-01-10 03:18:01,418 | INFO     | process IDs to be killed: [1891942] (in reverse order)
[2026-01-10 04:19:19] 2026-01-10 03:18:01,742 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:19:19] 2026-01-10 03:18:01,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:19:19] 2026-01-10 03:18:01,786 | INFO     | did not find any defunct processes belonging to 1891942
[2026-01-10 04:19:19] 2026-01-10 03:18:01,830 | INFO     | did not find any defunct processes belonging to 1891942
[2026-01-10 04:19:19] 2026-01-10 03:18:01,830 | INFO     | ready for new job
[2026-01-10 04:19:19] 2026-01-10 03:18:01,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:19:19] 2026-01-10 03:18:01,834 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 03:18:01,834 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:19:19] 2026-01-10 03:18:01,835 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 03:18:01,835 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 03:18:01,844 | INFO     | architecture information:
[2026-01-10 04:19:19] 2026-01-10 03:18:01,844 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:19:19] 2026-01-10 03:18:01,872 | INFO     | cat /etc/os-release:
[2026-01-10 04:19:19] NAME="CentOS Linux"
[2026-01-10 04:19:19] VERSION="7 (Core)"
[2026-01-10 04:19:19] ID="centos"
[2026-01-10 04:19:19] ID_LIKE="rhel fedora"
[2026-01-10 04:19:19] VERSION_ID="7"
[2026-01-10 04:19:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:19:19] ANSI_COLOR="0;31"
[2026-01-10 04:19:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:19:19] HOME_URL="https://www.centos.org/"
[2026-01-10 04:19:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:19:19] 
[2026-01-10 04:19:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:19:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:19:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:19:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:19:19] 
[2026-01-10 04:19:19] 2026-01-10 03:18:01,873 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 03:18:02,376 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-10 04:19:19] 2026-01-10 03:18:02,402 | INFO     | sufficient remaining disk space (3315254427648 B)
[2026-01-10 04:19:19] 2026-01-10 03:18:02,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:19:19] 2026-01-10 03:18:02,402 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:19:19] 2026-01-10 03:18:02,402 | INFO     | update_server=False
[2026-01-10 04:19:19] 2026-01-10 03:18:02,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:19:19] 2026-01-10 03:18:02,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 03:18:02,403 | INFO     | aborting loop
[2026-01-10 04:19:19] 2026-01-10 03:18:03,127 | INFO     | all job control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 03:18:03,170 | INFO     | all data control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 03:18:03,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 03:18:03,408 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:03,409 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:03,516 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:03,849 | INFO     | all payload control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 03:18:03,879 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,133 | INFO     | [job] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,176 | INFO     | [data] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 03:18:04,565 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,570 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,712 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,795 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,855 | INFO     | [payload] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:04,878 | INFO     | [job] validate thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:05,381 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:05,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 03:18:05,539 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:09,498 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:12,939 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:19:19] 2026-01-10 03:18:13,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:19:19] 2026-01-10 03:18:30,381 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:19:19] 2026-01-10 03:18:31,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23093441165120)>', '<ExcThread(monitor, started 23093200250624)>']
[2026-01-10 04:19:19] 2026-01-10 03:18:33,303 | INFO     | PID=1884342 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 04:19:19] 2026-01-10 03:18:33,303 | INFO     | .. there are 4 such processes running
[2026-01-10 04:19:19] 2026-01-10 03:18:33,303 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:19:19] 2026-01-10 03:18:33,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:19:19] 2026-01-10 03:18:33,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:19:19] 2026-01-10 03:18:33,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:19:19] 2026-01-10 03:18:33,304 | INFO     | [monitor] control thread has ended
[2026-01-10 04:19:19] 2026-01-10 03:18:36,825 | INFO     | all workflow threads have been joined
[2026-01-10 04:19:19] 2026-01-10 03:18:36,826 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:19:19] 2026-01-10 03:18:36,826 | INFO     | traces error code: 0
[2026-01-10 04:19:19] 2026-01-10 03:18:36,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:19:19] 2026-01-10 03:18:37,024 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:19:19] 2026-01-10 03:18:37,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:19:19] 2026-01-10 03:18:37,032 [wrapper] pilotpid: 1884342
[2026-01-10 04:19:19] 2026-01-10 03:18:37,036 [wrapper] Pilot exit status: 0
[2026-01-10 04:19:19] 2026-01-10 03:18:37,050 [wrapper] pandaids: 6962922566
[2026-01-10 04:19:19] 2026-01-10 03:18:37,230 [wrapper] cleanup supervisor_pilot 2257464 1884343
[2026-01-10 04:19:19] 2026-01-10 03:18:37,235 [wrapper] Test setup, not cleaning
[2026-01-10 04:19:19] 2026-01-10 03:18:37,239 [wrapper] apfmon messages muted
[2026-01-10 04:19:19] 2026-01-10 03:18:37,243 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:19:19] 2026-01-10 03:18:37,246 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:19:19]  *** Error codes and diagnostics ***
[2026-01-10 04:19:19]     "exeErrorCode": 0,
[2026-01-10 04:19:19]     "exeErrorDiag": "",
[2026-01-10 04:19:19]     "pilotErrorCode": 0,
[2026-01-10 04:19:19]     "pilotErrorDiag": "",
[2026-01-10 04:19:19]  *** Listing of results directory ***
[2026-01-10 04:19:19] total 445512
[2026-01-10 04:19:19] -rwx------ 1 boinc boinc     36322 Jan  8 09:20 runpilot2-wrapper.sh
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc       100 Jan 10 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:19:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 00:22 run_atlas
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc       105 Jan 10 00:22 job.xml
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc      6691 Jan 10 00:26 init_data.xml
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc 225502966 Jan 10 00:26 EVNT.47898824._000846.pool.root.1
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:26 start_atlas.sh
[2026-01-10 04:19:19] drwxrwx--x 2 boinc boinc      4096 Jan 10 00:26 shared
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc    592397 Jan 10 00:26 input.tar.gz
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc         0 Jan 10 00:26 boinc_lockfile
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc      2517 Jan 10 00:26 pandaJob.out
[2026-01-10 04:19:19] -rw------- 1 boinc boinc    989374 Jan 10 00:27 agis_schedconf.cvmfs.json
[2026-01-10 04:19:19] drwx------ 5 boinc boinc      4096 Jan 10 00:27 pilot3
[2026-01-10 04:19:19] -rw------- 1 boinc boinc 222181790 Jan 10 04:17 HITS.47898826._022001.pool.root.1
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc       528 Jan 10 04:17 boinc_task_state.xml
[2026-01-10 04:19:19] -rw------- 1 boinc boinc        95 Jan 10 04:17 pilot_heartbeat.json
[2026-01-10 04:19:19] -rw------- 1 boinc boinc      1033 Jan 10 04:17 memory_monitor_summary.json
[2026-01-10 04:19:19] -rw------- 1 boinc boinc   1516240 Jan 10 04:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:19:19] -rw------- 1 boinc boinc    385225 Jan 10 04:17 log.47898826._022001.job.log.tgz.1
[2026-01-10 04:19:19] -rw------- 1 boinc boinc      7793 Jan 10 04:17 heartbeat.json
[2026-01-10 04:19:19] -rw------- 1 boinc boinc      4907 Jan 10 04:18 pilotlog.txt
[2026-01-10 04:19:19] -rw------- 1 boinc boinc   1915924 Jan 10 04:18 log.47898826._022001.job.log.1
[2026-01-10 04:19:19] -rw------- 1 boinc boinc       357 Jan 10 04:18 output.list
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc       620 Jan 10 04:18 runtime_log
[2026-01-10 04:19:19] -rw------- 1 boinc boinc   2324480 Jan 10 04:18 result.tar.gz
[2026-01-10 04:19:19] -rw------- 1 boinc boinc       666 Jan 10 04:18 v29KDmIR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEreKDmwmggEn.diag
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc      9223 Jan 10 04:18 runtime_log.err
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc      8192 Jan 10 04:19 boinc_mmap_file
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc        26 Jan 10 04:19 wrapper_checkpoint.txt
[2026-01-10 04:19:19] -rw-r--r-- 1 boinc boinc     20844 Jan 10 04:19 stderr.txt
[2026-01-10 04:19:19] HITS file was successfully produced:
[2026-01-10 04:19:19] -rw------- 1 boinc boinc 222181790 Jan 10 04:17 shared/HITS.pool.root.1
[2026-01-10 04:19:19]  *** Contents of shared directory: ***
[2026-01-10 04:19:19] total 440068
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc 225502966 Jan 10 00:26 ATLAS.root_0
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:26 start_atlas.sh
[2026-01-10 04:19:19] -rw-r--r-- 2 boinc boinc    592397 Jan 10 00:26 input.tar.gz
[2026-01-10 04:19:19] -rw------- 1 boinc boinc 222181790 Jan 10 04:17 HITS.pool.root.1
[2026-01-10 04:19:19] -rw------- 1 boinc boinc   2324480 Jan 10 04:18 result.tar.gz
04:19:21 (1879990): run_atlas exited; CPU time 54329.681698
04:19:21 (1879990): called boinc_finish(0)

</stderr_txt>
]]>

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