Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:57:05 (2077783): wrapper (7.7.26015): starting
03:57:05 (2077783): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 03:57:05] Arguments: --nthreads 8
[2026-01-08 03:57:05] Threads: 8
[2026-01-08 03:57:05] Checking for CVMFS
[2026-01-08 03:57:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:57:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:57:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:57:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:57:06] 2.11.3.0 1904511 55213 187184 154906 0 594 44885394 45568001 9185 130560 0 232158029 99.733 178575823 20598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 03:57:06] CVMFS is ok
[2026-01-08 03:57:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:57:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:57:06] Further information can be found at the LHC@home message board.
[2026-01-08 03:57:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:57:06] Checking for apptainer binary...
[2026-01-08 03:57:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:57:06] Running /usr/bin/apptainer --version
[2026-01-08 03:57:06] apptainer version 1.4.1-1.el9
[2026-01-08 03:57:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:57:06] wns0020.triumf.lcg
[2026-01-08 03:57:06] apptainer works
[2026-01-08 03:57:06] Set ATHENA_PROC_NUMBER=8
[2026-01-08 03:57:06] Set ATHENA_CORE_NUMBER=8
[2026-01-08 03:57:06] Starting ATLAS job with PandaID=6962931351
[2026-01-08 03:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:04:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | WARNING  | wrong length of table data, x=[1767873486.0, 1767873547.0, 1767873608.0, 1767873669.0], y=[1674.0, 611949.0, 371410.0, 712550.0] (must be same and length>=4)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . Timing measurements:
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . get job = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . initial setup = 3 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload setup = 13 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-in = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload execution = 209 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-out = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . log creation = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:04:29] 2026-01-08 12:03:42,007 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931351/pilotlog.txt
[2026-01-08 04:04:29] 2026-01-08 12:03:42,052 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 04:04:29] - Log from pilotlog.txt -
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931351/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | extracted standard info from prmon json
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | WARNING  | wrong length of table data, x=[1767873486.0, 1767873547.0, 1767873608.0, 1767873669.0], y=[1674.0, 611949.0, 371410.0, 712550.0] (must be same and length>=4)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . Timing measurements:
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . get job = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . initial setup = 3 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload setup = 13 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-in = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload execution = 209 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-out = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . log creation = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:04:29] 2026-01-08 12:03:42,007 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931351/pilotlog.txt
[2026-01-08 04:04:29] 2026-01-08 12:03:42,052 | WARNING  | 
[2026-01-08 04:04:29] [begin log extracts]
[2026-01-08 04:04:29] - Log from pilotlog.txt -
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962931351/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | extracted standard info from prmon json
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:04:29] 2026-01-08 12:03:41,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:04:29] 2026-01-08 12:03:42,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | WARNING  | wrong length of table data, x=[1767873486.0, 1767873547.0, 1767873608.0, 1767873669.0], y=[1674.0, 611949.0, 371410.0, 712550.0] (must be same and length>=4)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,005 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . Timing measurements:
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . get job = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . initial setup = 3 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload setup = 13 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-in = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . payload execution = 209 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . stage-out = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | . log creation = 0 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | ..............................
[2026-01-08 04:04:29] 2026-01-08 12:03:42,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 04:04:29] 2026-01-08 12:03:42,007 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962931351/pilotlog.txt
[2026-01-08 04:04:29] [end log extracts]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,053 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,053 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 04:04:29] 2026-01-08 12:03:42,565 | INFO     | 
[2026-01-08 04:04:29] 2026-01-08 12:03:42,601 | INFO     | job summary report
[2026-01-08 04:04:29] 2026-01-08 12:03:42,601 | INFO     | --------------------------------------------------
[2026-01-08 04:04:29] 2026-01-08 12:03:42,601 | INFO     | PanDA job id: 6962931351
[2026-01-08 04:04:29] 2026-01-08 12:03:42,601 | INFO     | task id: 47961985
[2026-01-08 04:04:29] 2026-01-08 12:03:42,601 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 04:01:20,070 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | pilot state: failed 
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | transexitcode: 65
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | exeerrorcode: 65
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | exitcode: 65
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | cpuconsumptiontime: 50 s
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | nevents: 0
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | neventsw: 0
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | pid: 2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | pgrp: 2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | corecount: 8
[2026-01-08 04:04:29] 2026-01-08 12:03:42,602 | INFO     | event service: False
[2026-01-08 04:04:29] 2026-01-08 12:03:42,603 | INFO     | sizes: {0: 2283720, 1: 2284573, 8: 2284835, 12: 2284863, 226: 2310398, 227: 2310374, 228: 2314820, 231: 2314848, 360: 2315014}
[2026-01-08 04:04:29] 2026-01-08 12:03:42,603 | INFO     | --------------------------------------------------
[2026-01-08 04:04:29] 2026-01-08 12:03:42,603 | INFO     | 
[2026-01-08 04:04:29] 2026-01-08 12:03:42,603 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 04:04:29] 2026-01-08 12:03:42,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | job 6962931351 has completed (purged errors)
[2026-01-08 04:04:29] 2026-01-08 12:03:42,768 | INFO     | overall cleanup function is called
[2026-01-08 04:04:29] 2026-01-08 12:03:43,805 | INFO     | --- collectZombieJob: --- 10, [2102114]
[2026-01-08 04:04:29] 2026-01-08 12:03:43,805 | INFO     | zombie collector waiting for pid 2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:43,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:04:29] 2026-01-08 12:03:43,805 | INFO     | collected zombie processes
[2026-01-08 04:04:29] 2026-01-08 12:03:43,806 | INFO     | will attempt to kill all subprocesses of pid=2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:43,985 | INFO     | process IDs to be killed: [2102114] (in reverse order)
[2026-01-08 04:04:29] 2026-01-08 12:03:44,044 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:04:29] 2026-01-08 12:03:44,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:04:29] 2026-01-08 12:03:44,050 | INFO     | did not find any defunct processes belonging to 2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:44,055 | INFO     | did not find any defunct processes belonging to 2102114
[2026-01-08 04:04:29] 2026-01-08 12:03:44,056 | INFO     | ready for new job
[2026-01-08 04:04:29] 2026-01-08 12:03:44,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:04:29] 2026-01-08 12:03:44,057 | INFO     | ***************************************
[2026-01-08 04:04:29] 2026-01-08 12:03:44,057 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:04:29] 2026-01-08 12:03:44,057 | INFO     | ***************************************
[2026-01-08 04:04:29] 2026-01-08 12:03:44,057 | INFO     | 
[2026-01-08 04:04:29] 2026-01-08 12:03:44,059 | INFO     | architecture information:
[2026-01-08 04:04:29] 2026-01-08 12:03:44,059 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:04:29] 2026-01-08 12:03:44,070 | INFO     | cat /etc/os-release:
[2026-01-08 04:04:29] NAME="CentOS Linux"
[2026-01-08 04:04:29] VERSION="7 (Core)"
[2026-01-08 04:04:29] ID="centos"
[2026-01-08 04:04:29] ID_LIKE="rhel fedora"
[2026-01-08 04:04:29] VERSION_ID="7"
[2026-01-08 04:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:04:29] ANSI_COLOR="0;31"
[2026-01-08 04:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:04:29] HOME_URL="https://www.centos.org/"
[2026-01-08 04:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:04:29] 
[2026-01-08 04:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:04:29] 
[2026-01-08 04:04:29] 2026-01-08 12:03:44,070 | INFO     | ***************************************
[2026-01-08 04:04:29] 2026-01-08 12:03:44,573 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 04:04:29] 2026-01-08 12:03:44,642 | INFO     | sufficient remaining disk space (1092689592320 B)
[2026-01-08 04:04:29] 2026-01-08 12:03:44,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:04:29] 2026-01-08 12:03:44,643 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:04:29] 2026-01-08 12:03:44,643 | INFO     | update_server=False
[2026-01-08 04:04:29] 2026-01-08 12:03:44,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:04:29] 2026-01-08 12:03:44,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:04:29] 2026-01-08 12:03:44,666 | INFO     | aborting loop
[2026-01-08 04:04:29] 2026-01-08 12:03:44,825 | INFO     | all job control threads have been joined
[2026-01-08 04:04:29] 2026-01-08 12:03:45,163 | INFO     | all data control threads have been joined
[2026-01-08 04:04:29] 2026-01-08 12:03:45,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:04:29] 2026-01-08 12:03:45,649 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:45,672 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:45,736 | INFO     | all payload control threads have been joined
[2026-01-08 04:04:29] 2026-01-08 12:03:45,831 | INFO     | [job] control thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:45,871 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:04:29] 2026-01-08 12:03:46,059 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,170 | INFO     | [data] control thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,288 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,315 | INFO     | [job] validate thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,552 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,676 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,742 | INFO     | [payload] control thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,816 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:46,877 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:47,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:04:29] 2026-01-08 12:03:48,058 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:48,151 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:03:49,394 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:04:29] 2026-01-08 12:04:14,846 | INFO     | PID=2082769 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 04:04:29] 2026-01-08 12:04:14,846 | INFO     | .. there are 19 such processes running
[2026-01-08 04:04:29] 2026-01-08 12:04:14,847 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:04:29] 2026-01-08 12:04:14,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:04:29] 2026-01-08 12:04:14,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:04:29] 2026-01-08 12:04:22,528 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:04:29] 2026-01-08 12:04:23,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632508655424)>', '<ExcThread(monitor, started 139631601383168)>']
[2026-01-08 04:04:29] 2026-01-08 12:04:23,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:04:29] 2026-01-08 12:04:23,899 | INFO     | [monitor] control thread has ended
[2026-01-08 04:04:29] 2026-01-08 12:04:28,092 | INFO     | all workflow threads have been joined
[2026-01-08 04:04:29] 2026-01-08 12:04:28,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:04:29] 2026-01-08 12:04:28,092 | INFO     | traces error code: 0
[2026-01-08 04:04:29] 2026-01-08 12:04:28,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:04:29] 2026-01-08 12:04:28,912 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:04:29] 2026-01-08 12:04:28,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:04:29] 2026-01-08 12:04:28,992 [wrapper] pilotpid: 2082769
[2026-01-08 04:04:29] 2026-01-08 12:04:29,014 [wrapper] Pilot exit status: 0
[2026-01-08 04:04:29] 2026-01-08 12:04:29,228 [wrapper] pandaids: 6962931351
[2026-01-08 04:04:29] 2026-01-08 12:04:29,377 [wrapper] cleanup supervisor_pilot 2082791 2082770
[2026-01-08 04:04:29] 2026-01-08 12:04:29,379 [wrapper] Test setup, not cleaning
[2026-01-08 04:04:29] 2026-01-08 12:04:29,381 [wrapper] apfmon messages muted
[2026-01-08 04:04:29] 2026-01-08 12:04:29,383 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:04:29] 2026-01-08 12:04:29,385 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:04:29]  *** Error codes and diagnostics ***
[2026-01-08 04:04:29]     "exeErrorCode": 65,
[2026-01-08 04:04:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-08 04:04:29]     "pilotErrorCode": 1305,
[2026-01-08 04:04:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-08 04:04:29]  *** Listing of results directory ***
[2026-01-08 04:04:29] total 409320
[2026-01-08 04:04:29] -rwx------. 1 boinc boinc     36322 Jan  8 00:17 runpilot2-wrapper.sh
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc      5112 Jan  8 00:23 queuedata.json
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc    579449 Jan  8 00:23 pilot3.tar.gz
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc       100 Jan  8 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:04:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 03:55 run_atlas
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc       105 Jan  8 03:55 job.xml
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc 414901083 Jan  8 03:57 EVNT.47961981._000022.pool.root.1
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc      6445 Jan  8 03:57 init_data.xml
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 03:57 start_atlas.sh
[2026-01-08 04:04:29] drwxrwx--x. 2 boinc boinc      4096 Jan  8 03:57 shared
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc    592608 Jan  8 03:57 input.tar.gz
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc         0 Jan  8 03:57 boinc_lockfile
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc      2875 Jan  8 03:57 pandaJob.out
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc    989835 Jan  8 03:57 agis_schedconf.cvmfs.json
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc   1516240 Jan  8 03:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:04:29] drwx------. 5 boinc boinc      4096 Jan  8 03:57 pilot3
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc       524 Jan  8 04:01 boinc_task_state.xml
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc      1007 Jan  8 04:01 memory_monitor_summary.json
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc     50383 Jan  8 04:01 log.47961985._000483.job.log.tgz.1
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc        95 Jan  8 04:03 pilot_heartbeat.json
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc     10347 Jan  8 04:03 heartbeat.json
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 04:04 boinc_mmap_file
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc        23 Jan  8 04:04 wrapper_checkpoint.txt
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc      4823 Jan  8 04:04 pilotlog.txt
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc    111910 Jan  8 04:04 log.47961985._000483.job.log.1
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc       186 Jan  8 04:04 output.list
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 04:04 runtime_log
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc    184320 Jan  8 04:04 result.tar.gz
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc      8634 Jan  8 04:04 runtime_log.err
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc       650 Jan  8 04:04 qwFNDmbO0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNqeKDmpfYEJo.diag
[2026-01-08 04:04:29] -rw-r--r--. 1 boinc boinc     22517 Jan  8 04:04 stderr.txt
[2026-01-08 04:04:29] No HITS result produced
[2026-01-08 04:04:29]  *** Contents of shared directory: ***
[2026-01-08 04:04:29] total 405960
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc 414901083 Jan  8 03:57 ATLAS.root_0
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 03:57 start_atlas.sh
[2026-01-08 04:04:29] -rw-r--r--. 2 boinc boinc    592608 Jan  8 03:57 input.tar.gz
[2026-01-08 04:04:29] -rw-------. 1 boinc boinc    184320 Jan  8 04:04 result.tar.gz
04:04:31 (2077783): run_atlas exited; CPU time 52.504435
04:04:31 (2077783): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN