Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:31:23 (14753): wrapper (7.7.26015): starting
21:31:23 (14753): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:31:23] Arguments: --nthreads 8
[2026-01-08 21:31:23] Threads: 8
[2026-01-08 21:31:23] Checking for CVMFS
[2026-01-08 21:31:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:31:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:31:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:31:26] 2.11.2.0 20308 34457 123832 154919 1 61 18090307 25165825 96 130560 0 16507486 99.818 10714016 2608 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 21:31:26] CVMFS is ok
[2026-01-08 21:31:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:31:26] Checking for apptainer binary...
[2026-01-08 21:31:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:31:26] Running /usr/bin/apptainer --version
[2026-01-08 21:31:27] apptainer version 1.3.2-1.el7
[2026-01-08 21:31:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:31:43] cg-vwn476.simple-grid.lan
[2026-01-08 21:31:43] apptainer works
[2026-01-08 21:31:43] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:31:43] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:31:44] Starting ATLAS job with PandaID=6962920222
[2026-01-08 21:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:33:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:33:34] 2026-01-09 01:32:51,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:33:34] 2026-01-09 01:32:51,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:33:34] 2026-01-09 01:32:51,881 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:33:34] 2026-01-09 01:32:51,882 | INFO     | sum of square deviations: 7028008982.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,884 | INFO     | sum of deviations: 169401229739.99994
[2026-01-09 02:33:34] 2026-01-09 01:32:51,885 | INFO     | mean x: 1767913712.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,885 | INFO     | mean y: 2440289.1307420493
[2026-01-09 02:33:34] 2026-01-09 01:32:51,885 | INFO     | intersect: -42610874186.42666
[2026-01-09 02:33:34] 2026-01-09 01:32:51,885 | INFO     | chi2: 8.135354204946406
[2026-01-09 02:33:34] 2026-01-09 01:32:51,886 | INFO     | sum of square deviations: 6662039329.5
[2026-01-09 02:33:34] 2026-01-09 01:32:51,889 | INFO     | sum of deviations: 166172706591.00003
[2026-01-09 02:33:34] 2026-01-09 01:32:51,889 | INFO     | mean x: 1767913559.5
[2026-01-09 02:33:34] 2026-01-09 01:32:51,889 | INFO     | mean y: 2438943.690647482
[2026-01-09 02:33:34] 2026-01-09 01:32:51,889 | INFO     | intersect: -44095016305.51045
[2026-01-09 02:33:34] 2026-01-09 01:32:51,890 | INFO     | chi2: 8.147770345461318
[2026-01-09 02:33:34] 2026-01-09 01:32:51,890 | INFO     | current chi2=8.147770345461318 (change=-0.1526195443016176 %)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,890 | INFO     | right removable region: 277
[2026-01-09 02:33:34] 2026-01-09 01:32:51,890 | INFO     | sum of square deviations: 6662039329.5
[2026-01-09 02:33:34] 2026-01-09 01:32:51,893 | INFO     | sum of deviations: 70034493084.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,893 | INFO     | mean x: 1767913864.5
[2026-01-09 02:33:34] 2026-01-09 01:32:51,894 | INFO     | mean y: 2481674.2086330936
[2026-01-09 02:33:34] 2026-01-09 01:32:51,894 | INFO     | intersect: -18582660981.460068
[2026-01-09 02:33:34] 2026-01-09 01:32:51,894 | INFO     | chi2: 3.0415011891611017
[2026-01-09 02:33:34] 2026-01-09 01:32:51,894 | INFO     | current chi2=3.0415011891611017 (change=62.61378284780979 %)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,895 | INFO     | sum of square deviations: 6309000152.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,897 | INFO     | sum of deviations: -6578514500.000001
[2026-01-09 02:33:34] 2026-01-09 01:32:51,898 | INFO     | mean x: 1767914017.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,898 | INFO     | mean y: 2514733.8791208793
[2026-01-09 02:33:34] 2026-01-09 01:32:51,898 | INFO     | intersect: 1845952317.5508971
[2026-01-09 02:33:34] 2026-01-09 01:32:51,898 | INFO     | chi2: 0.21718484713112168
[2026-01-09 02:33:34] 2026-01-09 01:32:51,898 | INFO     | current chi2=0.21718484713112168 (change=92.85928777851225 %)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,899 | INFO     | sum of square deviations: 5968658887.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,901 | INFO     | sum of deviations: -17570428928.499996
[2026-01-09 02:33:34] 2026-01-09 01:32:51,902 | INFO     | mean x: 1767914169.5
[2026-01-09 02:33:34] 2026-01-09 01:32:51,902 | INFO     | mean y: 2519627.3470149254
[2026-01-09 02:33:34] 2026-01-09 01:32:51,902 | INFO     | intersect: 5206873043.244922
[2026-01-09 02:33:34] 2026-01-09 01:32:51,902 | INFO     | chi2: 0.12888438514522885
[2026-01-09 02:33:34] 2026-01-09 01:32:51,903 | INFO     | current chi2=0.12888438514522885 (change=40.656824429644914 %)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,903 | INFO     | sum of square deviations: 5640782972.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,906 | INFO     | sum of deviations: -12357146796.999996
[2026-01-09 02:33:34] 2026-01-09 01:32:51,906 | INFO     | mean x: 1767914322.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,906 | INFO     | mean y: 2517184.399239544
[2026-01-09 02:33:34] 2026-01-09 01:32:51,906 | INFO     | intersect: 3875450589.1969166
[2026-01-09 02:33:34] 2026-01-09 01:32:51,907 | INFO     | chi2: 0.11010758618222348
[2026-01-09 02:33:34] 2026-01-09 01:32:51,907 | INFO     | current chi2=0.11010758618222348 (change=14.56871516425158 %)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,907 | INFO     | left removable region: 40
[2026-01-09 02:33:34] 2026-01-09 01:32:51,907 | INFO     | sum of square deviations: 4127772278.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,909 | INFO     | sum of deviations: 7780624664.000003
[2026-01-09 02:33:34] 2026-01-09 01:32:51,910 | INFO     | mean x: 1767914749.0
[2026-01-09 02:33:34] 2026-01-09 01:32:51,910 | INFO     | mean y: 2506875.535864979
[2026-01-09 02:33:34] 2026-01-09 01:32:51,910 | INFO     | intersect: -3329915596.806437
[2026-01-09 02:33:34] 2026-01-09 01:32:51,910 | INFO     | chi2: 0.0013880205266241375
[2026-01-09 02:33:34] 2026-01-09 01:32:51,910 | INFO     | current memory leak: 1.88 B/s (using 237 data points, chi2=0.00)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,911 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-01-09 02:33:34] 2026-01-09 01:32:51,911 | INFO     | ..............................
[2026-01-09 02:33:34] 2026-01-09 01:32:51,911 | INFO     | . Timing measurements:
[2026-01-09 02:33:34] 2026-01-09 01:32:51,911 | INFO     | . get job = 0 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,911 | INFO     | . initial setup = 11 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | . payload setup = 144 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | . stage-in = 0 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | . payload execution = 17424 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | . stage-out = 1 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | . log creation = 0 s
[2026-01-09 02:33:34] 2026-01-09 01:32:51,912 | INFO     | ..............................
[2026-01-09 02:33:34] 2026-01-09 01:32:52,025 | INFO     | 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | job summary report
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | --------------------------------------------------
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | PanDA job id: 6962920222
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | task id: 47898826
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | errors: (none)
[2026-01-09 02:33:34] 2026-01-09 01:32:52,026 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | pilot state: finished 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | transexitcode: 0
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | exeerrorcode: 0
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | exeerrordiag: 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | exitcode: 0
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | exitmsg: OK
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | cpuconsumptiontime: 72824 s
[2026-01-09 02:33:34] 2026-01-09 01:32:52,027 | INFO     | nevents: 400
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | neventsw: 0
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | pid: 24986
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | pgrp: 24986
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | corecount: 8
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | event service: False
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | sizes: {0: 2283741, 1: 2283996, 12: 2283996, 23: 2284024, 34: 2284052, 44: 2284080, 55: 2284236, 66: 2284264, 76: 2284292, 87: 2284348, 98: 2284376, 109: 2284684, 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | --------------------------------------------------
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | 
[2026-01-09 02:33:34] 2026-01-09 01:32:52,028 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 02:33:34] 2026-01-09 01:32:52,072 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,072 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,072 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,072 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:33:34] 2026-01-09 01:32:52,074 | INFO     | job 6962920222 has completed (purged errors)
[2026-01-09 02:33:34] 2026-01-09 01:32:52,075 | INFO     | overall cleanup function is called
[2026-01-09 02:33:34] 2026-01-09 01:32:53,082 | INFO     | --- collectZombieJob: --- 10, [24986]
[2026-01-09 02:33:34] 2026-01-09 01:32:53,083 | INFO     | zombie collector waiting for pid 24986
[2026-01-09 02:33:34] 2026-01-09 01:32:53,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:33:34] 2026-01-09 01:32:53,083 | INFO     | collected zombie processes
[2026-01-09 02:33:34] 2026-01-09 01:32:53,083 | INFO     | will attempt to kill all subprocesses of pid=24986
[2026-01-09 02:33:34] 2026-01-09 01:32:53,148 | INFO     | process IDs to be killed: [24986] (in reverse order)
[2026-01-09 02:33:34] 2026-01-09 01:32:53,222 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:33:34] 2026-01-09 01:32:53,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:33:34] 2026-01-09 01:32:53,225 | INFO     | did not find any defunct processes belonging to 24986
[2026-01-09 02:33:34] 2026-01-09 01:32:53,227 | INFO     | did not find any defunct processes belonging to 24986
[2026-01-09 02:33:34] 2026-01-09 01:32:53,227 | INFO     | ready for new job
[2026-01-09 02:33:34] 2026-01-09 01:32:53,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:33:34] 2026-01-09 01:32:53,229 | INFO     | ***************************************
[2026-01-09 02:33:34] 2026-01-09 01:32:53,229 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:33:34] 2026-01-09 01:32:53,230 | INFO     | ***************************************
[2026-01-09 02:33:34] 2026-01-09 01:32:53,230 | INFO     | 
[2026-01-09 02:33:34] 2026-01-09 01:32:53,230 | INFO     | pilot is running in a VM
[2026-01-09 02:33:34] 2026-01-09 01:32:53,230 | INFO     | architecture information:
[2026-01-09 02:33:34] 2026-01-09 01:32:53,231 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:33:34] 2026-01-09 01:32:53,262 | INFO     | cat /etc/os-release:
[2026-01-09 02:33:34] NAME="CentOS Linux"
[2026-01-09 02:33:34] VERSION="7 (Core)"
[2026-01-09 02:33:34] ID="centos"
[2026-01-09 02:33:34] ID_LIKE="rhel fedora"
[2026-01-09 02:33:34] VERSION_ID="7"
[2026-01-09 02:33:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:33:34] ANSI_COLOR="0;31"
[2026-01-09 02:33:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:33:34] HOME_URL="https://www.centos.org/"
[2026-01-09 02:33:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:33:34] 
[2026-01-09 02:33:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:33:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:33:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:33:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:33:34] 
[2026-01-09 02:33:34] 2026-01-09 01:32:53,262 | INFO     | ***************************************
[2026-01-09 02:33:34] 2026-01-09 01:32:53,765 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 02:33:34] 2026-01-09 01:32:53,804 | INFO     | sufficient remaining disk space (497519951872 B)
[2026-01-09 02:33:34] 2026-01-09 01:32:53,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:33:34] 2026-01-09 01:32:53,805 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:33:34] 2026-01-09 01:32:53,805 | INFO     | update_server=False
[2026-01-09 02:33:34] 2026-01-09 01:32:53,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:33:34] 2026-01-09 01:32:53,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:33:34] 2026-01-09 01:32:53,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:33:34] 2026-01-09 01:32:53,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:33:34] 2026-01-09 01:32:53,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:33:34] 2026-01-09 01:32:53,807 | INFO     | aborting loop
[2026-01-09 02:33:34] 2026-01-09 01:32:53,979 | INFO     | all data control threads have been joined
[2026-01-09 02:33:34] 2026-01-09 01:32:54,138 | INFO     | all payload control threads have been joined
[2026-01-09 02:33:34] 2026-01-09 01:32:54,808 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:54,813 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:54,815 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:54,985 | INFO     | [data] control thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,144 | INFO     | [payload] control thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,196 | INFO     | all job control threads have been joined
[2026-01-09 02:33:34] 2026-01-09 01:32:55,362 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,471 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,568 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,592 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,809 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:55,892 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:56,059 | INFO     | [job] validate thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:56,201 | INFO     | [job] control thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:56,379 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:32:57,814 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:33:34] 2026-01-09 01:33:24,043 | INFO     | PID=18497 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:33:34] 2026-01-09 01:33:24,044 | INFO     | .. there are 2 such processes running
[2026-01-09 02:33:34] 2026-01-09 01:33:24,044 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:33:34] 2026-01-09 01:33:24,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:33:34] 2026-01-09 01:33:24,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:33:34] 2026-01-09 01:33:28,539 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:33:34] 2026-01-09 01:33:28,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584335161152)>', '<ExcThread(monitor, started 140583607727872)>']
[2026-01-09 02:33:34] 2026-01-09 01:33:29,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:33:34] 2026-01-09 01:33:29,070 | INFO     | [monitor] control thread has ended
[2026-01-09 02:33:34] 2026-01-09 01:33:33,565 | INFO     | all workflow threads have been joined
[2026-01-09 02:33:34] 2026-01-09 01:33:33,566 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:33:34] 2026-01-09 01:33:33,566 | INFO     | traces error code: 0
[2026-01-09 02:33:34] 2026-01-09 01:33:33,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:33:34] 2026-01-09 01:33:33,706 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:33:34] 2026-01-09 01:33:33,710 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:33:34] 2026-01-09 01:33:33,717 [wrapper] pilotpid: 18497
[2026-01-09 02:33:34] 2026-01-09 01:33:33,723 [wrapper] Pilot exit status: 0
[2026-01-09 02:33:34] 2026-01-09 01:33:33,755 [wrapper] pandaids: 6962920222
[2026-01-09 02:33:34] 2026-01-09 01:33:33,803 [wrapper] cleanup supervisor_pilot 30521 18498
[2026-01-09 02:33:34] 2026-01-09 01:33:33,808 [wrapper] Test setup, not cleaning
[2026-01-09 02:33:34] 2026-01-09 01:33:33,820 [wrapper] apfmon messages muted
[2026-01-09 02:33:34] 2026-01-09 01:33:33,825 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:33:34] 2026-01-09 01:33:33,831 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:33:34]  *** Error codes and diagnostics ***
[2026-01-09 02:33:34]     "exeErrorCode": 0,
[2026-01-09 02:33:34]     "exeErrorDiag": "",
[2026-01-09 02:33:34]     "pilotErrorCode": 0,
[2026-01-09 02:33:34]     "pilotErrorDiag": "",
[2026-01-09 02:33:34]  *** Listing of results directory ***
[2026-01-09 02:33:34] total 437604
[2026-01-09 02:33:34] -rwx------. 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:33:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:31 run_atlas
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:31 job.xml
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc      6391 Jan  8 21:31 init_data.xml
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc 222270817 Jan  8 21:31 EVNT.47898824._000829.pool.root.1
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:31 start_atlas.sh
[2026-01-09 02:33:34] drwxrwx--x. 2 boinc boinc        68 Jan  8 21:31 shared
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc    592400 Jan  8 21:31 input.tar.gz
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:31 boinc_lockfile
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc      2518 Jan  8 21:31 pandaJob.out
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc    989845 Jan  8 21:35 agis_schedconf.cvmfs.json
[2026-01-09 02:33:34] drwx------. 5 boinc boinc      4096 Jan  8 21:35 pilot3
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc 216200211 Jan  9 02:32 HITS.47898826._021827.pool.root.1
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc        95 Jan  9 02:32 pilot_heartbeat.json
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc       531 Jan  9 02:32 boinc_task_state.xml
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc      1019 Jan  9 02:32 memory_monitor_summary.json
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc   1516240 Jan  9 02:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc    489790 Jan  9 02:32 log.47898826._021827.job.log.tgz.1
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc      7779 Jan  9 02:32 heartbeat.json
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc        28 Jan  9 02:33 wrapper_checkpoint.txt
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc      8192 Jan  9 02:33 boinc_mmap_file
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc      4885 Jan  9 02:33 pilotlog.txt
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc   2379626 Jan  9 02:33 log.47898826._021827.job.log.1
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc       357 Jan  9 02:33 output.list
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc       620 Jan  9 02:33 runtime_log
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc   2887680 Jan  9 02:33 result.tar.gz
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc       656 Jan  9 02:33 ySSLDmkE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGxjKDm7h1YMn.diag
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc      8833 Jan  9 02:33 runtime_log.err
[2026-01-09 02:33:34] -rw-r--r--. 1 boinc boinc     20638 Jan  9 02:33 stderr.txt
[2026-01-09 02:33:34] HITS file was successfully produced:
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc 216200211 Jan  9 02:32 shared/HITS.pool.root.1
[2026-01-09 02:33:34]  *** Contents of shared directory: ***
[2026-01-09 02:33:34] total 431616
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc 222270817 Jan  8 21:31 ATLAS.root_0
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:31 start_atlas.sh
[2026-01-09 02:33:34] -rw-r--r--. 2 boinc boinc    592400 Jan  8 21:31 input.tar.gz
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc 216200211 Jan  9 02:32 HITS.pool.root.1
[2026-01-09 02:33:34] -rw-------. 1 boinc boinc   2887680 Jan  9 02:33 result.tar.gz
02:33:35 (14753): run_atlas exited; CPU time 72986.476013
02:33:35 (14753): called boinc_finish(0)

</stderr_txt>
]]>

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