Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:10 (2513661): wrapper (7.7.26015): starting
02:25:10 (2513661): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 02:25:10] Arguments: --nthreads 4
[2026-01-10 02:25:10] Threads: 4
[2026-01-10 02:25:10] Checking for CVMFS
[2026-01-10 02:25:10] No cvmfs_config command found, will try listing directly
[2026-01-10 02:25:10] CVMFS is ok
[2026-01-10 02:25:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:25:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:25:10] Further information can be found at the LHC@home message board.
[2026-01-10 02:25:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:25:10] Checking for apptainer binary...
[2026-01-10 02:25:10] which: no apptainer in ((null))
[2026-01-10 02:25:10] apptainer is not installed, using version from CVMFS
[2026-01-10 02:25:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:25:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-10 02:25:10] apptainer works
[2026-01-10 02:25:10] Set ATHENA_PROC_NUMBER=4
[2026-01-10 02:25:10] Set ATHENA_CORE_NUMBER=4
[2026-01-10 02:25:10] Starting ATLAS job with PandaID=6962919579
[2026-01-10 02:25:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:05:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:05:13] 2026-01-10 06:58:03,202 | INFO     | chi2: 0.08546859201437007
[2026-01-10 08:05:13] 2026-01-10 06:58:03,203 | INFO     | current memory leak: -1.59 B/s (using 301 data points, chi2=0.09)
[2026-01-10 08:05:13] 2026-01-10 06:58:03,204 | INFO     | could have reported an average CPU frequency of 2488 MHz (14 samples)
[2026-01-10 08:05:13] 2026-01-10 06:58:03,205 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 08:05:13] 2026-01-10 06:58:04,131 | INFO     | time since job start (19964s) is within the limit (174528.0s)
[2026-01-10 08:05:13] 2026-01-10 06:58:05,604 | INFO     | PID=2517376 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 08:05:13] 2026-01-10 06:58:05,707 | INFO     | monitor loop #1419: job 0:6962919579 is in state 'finished'
[2026-01-10 08:05:13] 2026-01-10 06:58:05,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:05:13] 2026-01-10 06:58:06,605 | INFO     | time since job start (19966s) is within the limit (174528.0s)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,090 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 08:05:13] 2026-01-10 06:58:07,098 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2429.925975
[2026-01-10 08:05:13] 2026-01-10 06:58:07,107 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962919579/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,108 | INFO     | extracted standard info from prmon json
[2026-01-10 08:05:13] 2026-01-10 06:58:07,108 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:05:13] 2026-01-10 06:58:07,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:05:13] 2026-01-10 06:58:07,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:05:13] 2026-01-10 06:58:07,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:05:13] 2026-01-10 06:58:07,116 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:05:13] 2026-01-10 06:58:07,117 | INFO     | sum of square deviations: 10842205148.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,120 | INFO     | sum of deviations: -11796241549.00001
[2026-01-10 08:05:13] 2026-01-10 06:58:07,120 | INFO     | mean x: 1768018289.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,121 | INFO     | mean y: 2385013.2935779816
[2026-01-10 08:05:13] 2026-01-10 06:58:07,121 | INFO     | intersect: 1925976249.1540146
[2026-01-10 08:05:13] 2026-01-10 06:58:07,121 | INFO     | chi2: 1.4021181085301455
[2026-01-10 08:05:13] 2026-01-10 06:58:07,122 | INFO     | sum of square deviations: 10352419220.5
[2026-01-10 08:05:13] 2026-01-10 06:58:07,126 | INFO     | sum of deviations: -11949402026.499998
[2026-01-10 08:05:13] 2026-01-10 06:58:07,126 | INFO     | mean x: 1768018136.5
[2026-01-10 08:05:13] 2026-01-10 06:58:07,126 | INFO     | mean y: 2384965.6428571427
[2026-01-10 08:05:13] 2026-01-10 06:58:07,126 | INFO     | intersect: 2043140759.3559206
[2026-01-10 08:05:13] 2026-01-10 06:58:07,127 | INFO     | chi2: 1.4014526328926091
[2026-01-10 08:05:13] 2026-01-10 06:58:07,127 | INFO     | current chi2=1.4014526328926091 (change=0.04746216695211278 %)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,127 | INFO     | right removable region: 321
[2026-01-10 08:05:13] 2026-01-10 06:58:07,128 | INFO     | sum of square deviations: 10352419220.5
[2026-01-10 08:05:13] 2026-01-10 06:58:07,131 | INFO     | sum of deviations: -45664304790.50001
[2026-01-10 08:05:13] 2026-01-10 06:58:07,131 | INFO     | mean x: 1768018441.5
[2026-01-10 08:05:13] 2026-01-10 06:58:07,132 | INFO     | mean y: 2395443.6242236025
[2026-01-10 08:05:13] 2026-01-10 06:58:07,132 | INFO     | intersect: 7801087833.129433
[2026-01-10 08:05:13] 2026-01-10 06:58:07,132 | INFO     | chi2: 0.20085255053828074
[2026-01-10 08:05:13] 2026-01-10 06:58:07,133 | INFO     | current chi2=0.20085255053828074 (change=85.6750619426179 %)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,133 | INFO     | sum of square deviations: 9877610318.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,136 | INFO     | sum of deviations: -32337420223.00001
[2026-01-10 08:05:13] 2026-01-10 06:58:07,137 | INFO     | mean x: 1768018594.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,137 | INFO     | mean y: 2391155.0157728707
[2026-01-10 08:05:13] 2026-01-10 06:58:07,137 | INFO     | intersect: 5790548249.254328
[2026-01-10 08:05:13] 2026-01-10 06:58:07,137 | INFO     | chi2: 0.15140642589739914
[2026-01-10 08:05:13] 2026-01-10 06:58:07,138 | INFO     | current chi2=0.15140642589739914 (change=24.618121357367382 %)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,138 | INFO     | left removable region: 20
[2026-01-10 08:05:13] 2026-01-10 06:58:07,138 | INFO     | sum of square deviations: 8456158550.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,141 | INFO     | sum of deviations: -13470143830.000002
[2026-01-10 08:05:13] 2026-01-10 06:58:07,142 | INFO     | mean x: 1768018716.0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,142 | INFO     | mean y: 2384714.4983388702
[2026-01-10 08:05:13] 2026-01-10 06:58:07,142 | INFO     | intersect: 2818730488.744959
[2026-01-10 08:05:13] 2026-01-10 06:58:07,142 | INFO     | chi2: 0.08546859201437007
[2026-01-10 08:05:13] 2026-01-10 06:58:07,143 | INFO     | current memory leak: -1.59 B/s (using 301 data points, chi2=0.09)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,143 | INFO     | could have reported an average CPU frequency of 2484 MHz (15 samples)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | ..............................
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . Timing measurements:
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . get job = 0 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . initial setup = 1 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . payload setup = 5 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . stage-in = 0 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . payload execution = 19929 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,144 | INFO     | . stage-out = 1 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,145 | INFO     | . log creation = 0 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,145 | INFO     | ..............................
[2026-01-10 08:05:13] 2026-01-10 06:58:07,261 | INFO     | 
[2026-01-10 08:05:13] 2026-01-10 06:58:07,261 | INFO     | job summary report
[2026-01-10 08:05:13] 2026-01-10 06:58:07,261 | INFO     | --------------------------------------------------
[2026-01-10 08:05:13] 2026-01-10 06:58:07,261 | INFO     | PanDA job id: 6962919579
[2026-01-10 08:05:13] 2026-01-10 06:58:07,261 | INFO     | task id: 47898826
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | errors: (none)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | pilot state: finished 
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | transexitcode: 0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | exeerrorcode: 0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | exeerrordiag: 
[2026-01-10 08:05:13] 2026-01-10 06:58:07,262 | INFO     | exitcode: 0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | exitmsg: OK
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | cpuconsumptiontime: 74038 s
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | nevents: 400
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | neventsw: 0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | pid: 2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | pgrp: 2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:07,263 | INFO     | corecount: 4
[2026-01-10 08:05:13] 2026-01-10 06:58:07,264 | INFO     | event service: False
[2026-01-10 08:05:13] 2026-01-10 06:58:07,264 | INFO     | sizes: {0: 2283866, 1: 2284008, 5: 2284270, 12: 2284326, 19938: 2317844, 19940: 2326864, 19941: 2327048, 19950: 2327266}
[2026-01-10 08:05:13] 2026-01-10 06:58:07,264 | INFO     | --------------------------------------------------
[2026-01-10 08:05:13] 2026-01-10 06:58:07,264 | INFO     | 
[2026-01-10 08:05:13] 2026-01-10 06:58:07,264 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-10 08:05:13] 2026-01-10 06:58:07,283 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,283 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,283 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:05:13] 2026-01-10 06:58:07,286 | INFO     | job 6962919579 has completed (purged errors)
[2026-01-10 08:05:13] 2026-01-10 06:58:07,286 | INFO     | overall cleanup function is called
[2026-01-10 08:05:13] 2026-01-10 06:58:08,294 | INFO     | --- collectZombieJob: --- 10, [2524219]
[2026-01-10 08:05:13] 2026-01-10 06:58:08,295 | INFO     | zombie collector waiting for pid 2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:08,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:05:13] 2026-01-10 06:58:08,295 | INFO     | collected zombie processes
[2026-01-10 08:05:13] 2026-01-10 06:58:08,295 | INFO     | will attempt to kill all subprocesses of pid=2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:08,626 | INFO     | process IDs to be killed: [2524219] (in reverse order)
[2026-01-10 08:05:13] 2026-01-10 06:58:08,713 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:05:13] 2026-01-10 06:58:08,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:05:13] 2026-01-10 06:58:08,723 | INFO     | did not find any defunct processes belonging to 2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:08,732 | INFO     | did not find any defunct processes belonging to 2524219
[2026-01-10 08:05:13] 2026-01-10 06:58:08,732 | INFO     | ready for new job
[2026-01-10 08:05:13] 2026-01-10 06:58:08,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:05:13] 2026-01-10 06:58:08,735 | INFO     | ***************************************
[2026-01-10 08:05:13] 2026-01-10 06:58:08,735 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:05:13] 2026-01-10 06:58:08,735 | INFO     | ***************************************
[2026-01-10 08:05:13] 2026-01-10 06:58:08,735 | INFO     | 
[2026-01-10 08:05:13] 2026-01-10 06:58:08,738 | INFO     | architecture information:
[2026-01-10 08:05:13] 2026-01-10 06:58:08,738 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:05:13] 2026-01-10 06:58:08,751 | INFO     | cat /etc/os-release:
[2026-01-10 08:05:13] NAME="CentOS Linux"
[2026-01-10 08:05:13] VERSION="7 (Core)"
[2026-01-10 08:05:13] ID="centos"
[2026-01-10 08:05:13] ID_LIKE="rhel fedora"
[2026-01-10 08:05:13] VERSION_ID="7"
[2026-01-10 08:05:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:05:13] ANSI_COLOR="0;31"
[2026-01-10 08:05:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:05:13] HOME_URL="https://www.centos.org/"
[2026-01-10 08:05:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:05:13] 
[2026-01-10 08:05:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:05:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:05:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:05:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:05:13] 
[2026-01-10 08:05:13] 2026-01-10 06:58:08,751 | INFO     | ***************************************
[2026-01-10 08:05:13] 2026-01-10 06:58:09,254 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-10 08:05:13] 2026-01-10 06:58:09,268 | INFO     | sufficient remaining disk space (1662748983296 B)
[2026-01-10 08:05:13] 2026-01-10 06:58:09,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:05:13] 2026-01-10 06:58:09,269 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:05:13] 2026-01-10 06:58:09,269 | INFO     | update_server=False
[2026-01-10 08:05:13] 2026-01-10 06:58:09,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:05:13] 2026-01-10 06:58:09,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:05:13] 2026-01-10 06:58:09,269 | INFO     | aborting loop
[2026-01-10 08:05:13] 2026-01-10 06:58:09,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:05:13] 2026-01-10 06:58:09,777 | INFO     | all job control threads have been joined
[2026-01-10 08:05:13] 2026-01-10 06:58:09,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:05:13] 2026-01-10 06:58:10,155 | INFO     | all data control threads have been joined
[2026-01-10 08:05:13] 2026-01-10 06:58:10,273 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:10,274 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:10,432 | INFO     | [job] validate thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:10,700 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:10,775 | INFO     | all payload control threads have been joined
[2026-01-10 08:05:13] 2026-01-10 06:58:10,782 | INFO     | [job] control thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:10,808 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,048 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,053 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,157 | INFO     | [data] control thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,433 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,780 | INFO     | [payload] control thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:11,902 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:12,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:05:13] 2026-01-10 06:58:13,271 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:13,276 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:19,557 | INFO     | job.realtimelogging is not enabled
[2026-01-10 08:05:13] 2026-01-10 06:58:20,562 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:05:13] 2026-01-10 06:58:40,108 | INFO     | PID=2517376 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 08:05:13] 2026-01-10 06:58:40,110 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:05:13] 2026-01-10 06:58:40,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:05:13] 2026-01-10 06:58:40,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:05:13] 2026-01-10 06:58:53,647 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:05:13] 2026-01-10 06:58:55,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22943428765504)>', '<ExcThread(monitor, started 22943188875008)>']
[2026-01-10 08:05:13] 2026-01-10 06:58:56,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:05:13] 2026-01-10 06:58:56,182 | INFO     | [monitor] control thread has ended
[2026-01-10 08:05:13] 2026-01-10 06:59:00,278 | INFO     | all workflow threads have been joined
[2026-01-10 08:05:13] 2026-01-10 06:59:00,278 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:05:13] 2026-01-10 06:59:00,279 | INFO     | traces error code: 0
[2026-01-10 08:05:13] 2026-01-10 06:59:00,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:05:13] 2026-01-10 06:59:00,406 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:05:13] 2026-01-10 06:59:00,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:05:13] 2026-01-10 06:59:00,412 [wrapper] pilotpid: 2517376
[2026-01-10 08:05:13] 2026-01-10 06:59:00,414 [wrapper] Pilot exit status: 0
[2026-01-10 08:05:13] 2026-01-10 06:59:00,425 [wrapper] pandaids: 6962919579
[2026-01-10 08:05:13] 2026-01-10 06:59:00,490 [wrapper] cleanup supervisor_pilot 2736116 2517377
[2026-01-10 08:05:13] 2026-01-10 06:59:00,493 [wrapper] Test setup, not cleaning
[2026-01-10 08:05:13] 2026-01-10 06:59:00,495 [wrapper] apfmon messages muted
[2026-01-10 08:05:13] 2026-01-10 06:59:00,498 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:05:13] 2026-01-10 06:59:00,500 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:05:13]  *** Error codes and diagnostics ***
[2026-01-10 08:05:13]     "exeErrorCode": 0,
[2026-01-10 08:05:13]     "exeErrorDiag": "",
[2026-01-10 08:05:13]     "pilotErrorCode": 0,
[2026-01-10 08:05:13]     "pilotErrorDiag": "",
[2026-01-10 08:05:13]  *** Listing of results directory ***
[2026-01-10 08:05:13] total 445004
[2026-01-10 08:05:13] -rwx------ 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc       100 Jan 10 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:05:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 02:25 run_atlas
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc       105 Jan 10 02:25 job.xml
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc      6423 Jan 10 02:25 init_data.xml
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc 224359242 Jan 10 02:25 EVNT.47898824._000337.pool.root.1
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc    592398 Jan 10 02:25 input.tar.gz
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:25 start_atlas.sh
[2026-01-10 08:05:13] drwxrwx--x 2 boinc boinc      4096 Jan 10 02:25 shared
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc         0 Jan 10 02:25 boinc_lockfile
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc      2519 Jan 10 02:25 pandaJob.out
[2026-01-10 08:05:13] -rw------- 1 boinc boinc    989382 Jan 10 02:25 agis_schedconf.cvmfs.json
[2026-01-10 08:05:13] drwx------ 5 boinc boinc      4096 Jan 10 02:25 pilot3
[2026-01-10 08:05:13] -rw------- 1 boinc boinc 220915522 Jan 10 07:57 HITS.47898826._021369.pool.root.1
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc       528 Jan 10 07:57 boinc_task_state.xml
[2026-01-10 08:05:13] -rw------- 1 boinc boinc      1038 Jan 10 07:57 memory_monitor_summary.json
[2026-01-10 08:05:13] -rw------- 1 boinc boinc   1516240 Jan 10 07:57 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:05:13] -rw------- 1 boinc boinc    489004 Jan 10 07:57 log.47898826._021369.job.log.tgz.1
[2026-01-10 08:05:13] -rw------- 1 boinc boinc      7835 Jan 10 07:58 heartbeat.json
[2026-01-10 08:05:13] -rw------- 1 boinc boinc        95 Jan 10 07:58 pilot_heartbeat.json
[2026-01-10 08:05:13] -rw------- 1 boinc boinc      4831 Jan 10 07:59 pilotlog.txt
[2026-01-10 08:05:13] -rw------- 1 boinc boinc   2755215 Jan 10 07:59 log.47898826._021369.job.log.1
[2026-01-10 08:05:13] -rw------- 1 boinc boinc       357 Jan 10 07:59 output.list
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc       620 Jan 10 07:59 runtime_log
[2026-01-10 08:05:13] -rw------- 1 boinc boinc   3266560 Jan 10 07:59 result.tar.gz
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc      9206 Jan 10 07:59 runtime_log.err
[2026-01-10 08:05:13] -rw------- 1 boinc boinc       666 Jan 10 07:59 gh7LDmLE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPtjKDmcsFEHn.diag
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc        26 Jan 10 08:04 wrapper_checkpoint.txt
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc      8192 Jan 10 08:05 boinc_mmap_file
[2026-01-10 08:05:13] -rw-r--r-- 1 boinc boinc     21293 Jan 10 08:05 stderr.txt
[2026-01-10 08:05:13] HITS file was successfully produced:
[2026-01-10 08:05:13] -rw------- 1 boinc boinc 220915522 Jan 10 07:57 shared/HITS.pool.root.1
[2026-01-10 08:05:13]  *** Contents of shared directory: ***
[2026-01-10 08:05:13] total 438640
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc 224359242 Jan 10 02:25 ATLAS.root_0
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc    592398 Jan 10 02:25 input.tar.gz
[2026-01-10 08:05:13] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:25 start_atlas.sh
[2026-01-10 08:05:13] -rw------- 1 boinc boinc 220915522 Jan 10 07:57 HITS.pool.root.1
[2026-01-10 08:05:13] -rw------- 1 boinc boinc   3266560 Jan 10 07:59 result.tar.gz
08:05:15 (2513661): run_atlas exited; CPU time 74854.059861
08:05:15 (2513661): called boinc_finish(0)

</stderr_txt>
]]>

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