Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:47 (30144): wrapper (7.7.26015): starting
06:18:47 (30144): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 06:18:47] Arguments: --nthreads 8
[2026-01-08 06:18:47] Threads: 8
[2026-01-08 06:18:47] Checking for CVMFS
[2026-01-08 06:18:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 06:18:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 06:18:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 06:18:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 06:18:47] 2.11.2.0 2804 101940 87580 154903 0 56 12595980 20275200 1 130560 0 18660521 99.701 7238895 33730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 06:18:47] CVMFS is ok
[2026-01-08 06:18:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 06:18:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 06:18:47] Further information can be found at the LHC@home message board.
[2026-01-08 06:18:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:18:47] Checking for apptainer binary...
[2026-01-08 06:18:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 06:18:47] Running /usr/bin/apptainer --version
[2026-01-08 06:18:47] apptainer version 1.3.2-1.el7
[2026-01-08 06:18:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:18:49] c-204-3.aglt2.org
[2026-01-08 06:18:49] apptainer works
[2026-01-08 06:18:49] Set ATHENA_PROC_NUMBER=8
[2026-01-08 06:18:49] Set ATHENA_CORE_NUMBER=8
[2026-01-08 06:18:49] Starting ATLAS job with PandaID=6962919058
[2026-01-08 06:18:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:17:31]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:17:31] 2026-01-08 14:16:42,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:17:31] 2026-01-08 14:16:43,374 | INFO     | time since job start (10655s) is within the limit (174528.0s)
[2026-01-08 09:17:31] 2026-01-08 14:16:44,538 | INFO     | monitor loop #788: job 0:6962919058 is in state 'finished'
[2026-01-08 09:17:31] 2026-01-08 14:16:44,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:17:31] 2026-01-08 14:16:45,377 | INFO     | time since job start (10657s) is within the limit (174528.0s)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,047 | INFO     | monitor loop #789: job 0:6962919058 is in state 'finished'
[2026-01-08 09:17:31] 2026-01-08 14:16:47,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,382 | INFO     | time since job start (10659s) is within the limit (174528.0s)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,648 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 09:17:31] 2026-01-08 14:16:47,651 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-08 09:17:31] 2026-01-08 14:16:47,653 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962919058/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,653 | INFO     | extracted standard info from prmon json
[2026-01-08 09:17:31] 2026-01-08 14:16:47,654 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:17:31] 2026-01-08 14:16:47,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:17:31] 2026-01-08 14:16:47,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:17:31] 2026-01-08 14:16:47,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:17:31] 2026-01-08 14:16:47,658 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:17:31] 2026-01-08 14:16:47,658 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 09:17:31] 2026-01-08 14:16:47,659 | INFO     | sum of deviations: 12135012216.500002
[2026-01-08 09:17:31] 2026-01-08 14:16:47,659 | INFO     | mean x: 1767876457.5
[2026-01-08 09:17:31] 2026-01-08 14:16:47,659 | INFO     | mean y: 2508145.614942529
[2026-01-08 09:17:31] 2026-01-08 14:16:47,659 | INFO     | intersect: -13130986647.345411
[2026-01-08 09:17:31] 2026-01-08 14:16:47,660 | INFO     | chi2: 1.4938127549638867
[2026-01-08 09:17:31] 2026-01-08 14:16:47,660 | INFO     | sum of square deviations: 1496660620.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,661 | INFO     | sum of deviations: 11692823186.00001
[2026-01-08 09:17:31] 2026-01-08 14:16:47,661 | INFO     | mean x: 1767876305.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,661 | INFO     | mean y: 2507652.6153846155
[2026-01-08 09:17:31] 2026-01-08 14:16:47,661 | INFO     | intersect: -13809217445.813425
[2026-01-08 09:17:31] 2026-01-08 14:16:47,662 | INFO     | chi2: 1.4949172829974564
[2026-01-08 09:17:31] 2026-01-08 14:16:47,662 | INFO     | current chi2=1.4949172829974564 (change=-0.07394019296591518 %)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,662 | INFO     | right removable region: 168
[2026-01-08 09:17:31] 2026-01-08 14:16:47,662 | INFO     | sum of square deviations: 1496660620.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,663 | INFO     | sum of deviations: -12927132627.000004
[2026-01-08 09:17:31] 2026-01-08 14:16:47,663 | INFO     | mean x: 1767876610.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,663 | INFO     | mean y: 2535690.355029586
[2026-01-08 09:17:31] 2026-01-08 14:16:47,663 | INFO     | intersect: 15272246872.868244
[2026-01-08 09:17:31] 2026-01-08 14:16:47,664 | INFO     | chi2: 0.10502870853682063
[2026-01-08 09:17:31] 2026-01-08 14:16:47,664 | INFO     | current chi2=0.10502870853682063 (change=92.9690847672967 %)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,664 | INFO     | sum of square deviations: 1367709365.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,665 | INFO     | sum of deviations: -9501405872.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,665 | INFO     | mean x: 1767876762.5
[2026-01-08 09:17:31] 2026-01-08 14:16:47,665 | INFO     | mean y: 2531589.573170732
[2026-01-08 09:17:31] 2026-01-08 14:16:47,665 | INFO     | intersect: 12283879573.31667
[2026-01-08 09:17:31] 2026-01-08 14:16:47,666 | INFO     | chi2: 0.0877353991088791
[2026-01-08 09:17:31] 2026-01-08 14:16:47,666 | INFO     | current chi2=0.0877353991088791 (change=16.46531664423817 %)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,666 | INFO     | left removable region: 20
[2026-01-08 09:17:31] 2026-01-08 14:16:47,666 | INFO     | sum of square deviations: 1005179777.0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,667 | INFO     | sum of deviations: 2406307382.000001
[2026-01-08 09:17:31] 2026-01-08 14:16:47,667 | INFO     | mean x: 1767876884.5
[2026-01-08 09:17:31] 2026-01-08 14:16:47,667 | INFO     | mean y: 2515408.5675675673
[2026-01-08 09:17:31] 2026-01-08 14:16:47,667 | INFO     | intersect: -4229618280.3292727
[2026-01-08 09:17:31] 2026-01-08 14:16:47,668 | INFO     | chi2: 0.00023249751414645395
[2026-01-08 09:17:31] 2026-01-08 14:16:47,668 | INFO     | current memory leak: 2.39 B/s (using 148 data points, chi2=0.00)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,668 | INFO     | could have reported an average CPU frequency of 2030 MHz (9 samples)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,668 | INFO     | ..............................
[2026-01-08 09:17:31] 2026-01-08 14:16:47,668 | INFO     | . Timing measurements:
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . get job = 0 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . initial setup = 2 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . payload setup = 8 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . stage-in = 0 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . payload execution = 10617 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . stage-out = 1 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | . log creation = 0 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,669 | INFO     | ..............................
[2026-01-08 09:17:31] 2026-01-08 14:16:47,757 | INFO     | 
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | job summary report
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | --------------------------------------------------
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | PanDA job id: 6962919058
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | task id: 47898826
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | errors: (none)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | pilot state: finished 
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | transexitcode: 0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | exeerrorcode: 0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | exeerrordiag: 
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | exitcode: 0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,759 | INFO     | exitmsg: OK
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | cpuconsumptiontime: 79993 s
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | nevents: 400
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | neventsw: 0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | pid: 7960
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | pgrp: 7960
[2026-01-08 09:17:31] 2026-01-08 14:16:47,760 | INFO     | corecount: 8
[2026-01-08 09:17:31] 2026-01-08 14:16:47,761 | INFO     | event service: False
[2026-01-08 09:17:31] 2026-01-08 14:16:47,761 | INFO     | sizes: {0: 2283141, 1: 2283997, 7: 2284259, 12: 2284287, 10629: 2313229, 10631: 2322227, 10634: 2322411, 10642: 2322669}
[2026-01-08 09:17:31] 2026-01-08 14:16:47,761 | INFO     | --------------------------------------------------
[2026-01-08 09:17:31] 2026-01-08 14:16:47,761 | INFO     | 
[2026-01-08 09:17:31] 2026-01-08 14:16:47,761 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 09:17:31] 2026-01-08 14:16:47,788 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,789 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,789 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,789 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,790 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,790 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,792 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,792 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:17:31] 2026-01-08 14:16:47,793 | INFO     | job 6962919058 has completed (purged errors)
[2026-01-08 09:17:31] 2026-01-08 14:16:47,793 | INFO     | overall cleanup function is called
[2026-01-08 09:17:31] 2026-01-08 14:16:48,801 | INFO     | --- collectZombieJob: --- 10, [7960]
[2026-01-08 09:17:31] 2026-01-08 14:16:48,801 | INFO     | zombie collector waiting for pid 7960
[2026-01-08 09:17:31] 2026-01-08 14:16:48,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:17:31] 2026-01-08 14:16:48,801 | INFO     | collected zombie processes
[2026-01-08 09:17:31] 2026-01-08 14:16:48,802 | INFO     | will attempt to kill all subprocesses of pid=7960
[2026-01-08 09:17:31] 2026-01-08 14:16:48,894 | INFO     | process IDs to be killed: [7960] (in reverse order)
[2026-01-08 09:17:31] 2026-01-08 14:16:48,957 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:17:31] 2026-01-08 14:16:48,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:17:31] 2026-01-08 14:16:48,964 | INFO     | did not find any defunct processes belonging to 7960
[2026-01-08 09:17:31] 2026-01-08 14:16:48,967 | INFO     | did not find any defunct processes belonging to 7960
[2026-01-08 09:17:31] 2026-01-08 14:16:48,968 | INFO     | ready for new job
[2026-01-08 09:17:31] 2026-01-08 14:16:48,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:17:31] 2026-01-08 14:16:48,970 | INFO     | ***************************************
[2026-01-08 09:17:31] 2026-01-08 14:16:48,970 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:17:31] 2026-01-08 14:16:48,970 | INFO     | ***************************************
[2026-01-08 09:17:31] 2026-01-08 14:16:48,970 | INFO     | 
[2026-01-08 09:17:31] 2026-01-08 14:16:48,971 | INFO     | architecture information:
[2026-01-08 09:17:31] 2026-01-08 14:16:48,972 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:17:31] 2026-01-08 14:16:48,992 | INFO     | cat /etc/os-release:
[2026-01-08 09:17:31] NAME="CentOS Linux"
[2026-01-08 09:17:31] VERSION="7 (Core)"
[2026-01-08 09:17:31] ID="centos"
[2026-01-08 09:17:31] ID_LIKE="rhel fedora"
[2026-01-08 09:17:31] VERSION_ID="7"
[2026-01-08 09:17:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:17:31] ANSI_COLOR="0;31"
[2026-01-08 09:17:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:17:31] HOME_URL="https://www.centos.org/"
[2026-01-08 09:17:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:17:31] 
[2026-01-08 09:17:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:17:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:17:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:17:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:17:31] 
[2026-01-08 09:17:31] 2026-01-08 14:16:48,993 | INFO     | ***************************************
[2026-01-08 09:17:31] 2026-01-08 14:16:49,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 09:17:31] 2026-01-08 14:16:49,517 | INFO     | sufficient remaining disk space (18535677952 B)
[2026-01-08 09:17:31] 2026-01-08 14:16:49,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:17:31] 2026-01-08 14:16:49,518 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:17:31] 2026-01-08 14:16:49,518 | INFO     | update_server=False
[2026-01-08 09:17:31] 2026-01-08 14:16:49,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:17:31] 2026-01-08 14:16:49,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:17:31] 2026-01-08 14:16:49,551 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 09:17:31] 2026-01-08 14:16:49,551 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 09:17:31] 2026-01-08 14:16:49,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:17:31] 2026-01-08 14:16:49,556 | INFO     | will abort loop
[2026-01-08 09:17:31] 2026-01-08 14:16:49,992 | INFO     | all data control threads have been joined
[2026-01-08 09:17:31] 2026-01-08 14:16:50,194 | INFO     | all payload control threads have been joined
[2026-01-08 09:17:31] 2026-01-08 14:16:50,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:17:31] 2026-01-08 14:16:50,504 | INFO     | all job control threads have been joined
[2026-01-08 09:17:31] 2026-01-08 14:16:50,524 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,525 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,540 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,561 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,586 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:17:31] 2026-01-08 14:16:50,650 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,857 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:50,998 | INFO     | [data] control thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,129 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,147 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,200 | INFO     | [payload] control thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,360 | INFO     | [job] validate thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,495 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:51,510 | INFO     | [job] control thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:52,355 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:16:54,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:17:31] 2026-01-08 14:17:20,511 | INFO     | PID=1452 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 09:17:31] 2026-01-08 14:17:20,511 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:17:31] 2026-01-08 14:17:20,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:17:31] 2026-01-08 14:17:20,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:17:31] 2026-01-08 14:17:25,059 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:17:31] 2026-01-08 14:17:26,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600038483776)>', '<ExcThread(monitor, started 140599369918208)>']
[2026-01-08 09:17:31] 2026-01-08 14:17:26,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:17:31] 2026-01-08 14:17:26,543 | INFO     | [monitor] control thread has ended
[2026-01-08 09:17:31] 2026-01-08 14:17:31,494 | INFO     | all workflow threads have been joined
[2026-01-08 09:17:31] 2026-01-08 14:17:31,494 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:17:31] 2026-01-08 14:17:31,501 | INFO     | traces error code: 0
[2026-01-08 09:17:31] 2026-01-08 14:17:31,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:17:31] 2026-01-08 14:17:31,623 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:17:31] 2026-01-08 14:17:31,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:17:31] 2026-01-08 14:17:31,633 [wrapper] pilotpid: 1452
[2026-01-08 09:17:31] 2026-01-08 14:17:31,638 [wrapper] Pilot exit status: 0
[2026-01-08 09:17:31] 2026-01-08 14:17:31,658 [wrapper] pandaids: 6962919058
[2026-01-08 09:17:31] 2026-01-08 14:17:31,707 [wrapper] cleanup supervisor_pilot 15362 1453
[2026-01-08 09:17:31] 2026-01-08 14:17:31,712 [wrapper] Test setup, not cleaning
[2026-01-08 09:17:31] 2026-01-08 14:17:31,717 [wrapper] apfmon messages muted
[2026-01-08 09:17:31] 2026-01-08 14:17:31,722 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:17:31] 2026-01-08 14:17:31,727 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:17:31]  *** Error codes and diagnostics ***
[2026-01-08 09:17:31]     "exeErrorCode": 0,
[2026-01-08 09:17:31]     "exeErrorDiag": "",
[2026-01-08 09:17:31]     "pilotErrorCode": 0,
[2026-01-08 09:17:31]     "pilotErrorDiag": "",
[2026-01-08 09:17:31]  *** Listing of results directory ***
[2026-01-08 09:17:31] total 440688
[2026-01-08 09:17:31] -rwx------ 1 boincer umatlas     36322 Jan  8 03:06 runpilot2-wrapper.sh
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas       100 Jan  8 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:17:31] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 06:18 run_atlas
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas       105 Jan  8 06:18 job.xml
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas 225175539 Jan  8 06:18 EVNT.47898824._000837.pool.root.1
[2026-01-08 09:17:31] drwxrwx--x 2 boincer umatlas      4096 Jan  8 06:18 shared
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 06:18 input.tar.gz
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 06:18 start_atlas.sh
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas         0 Jan  8 06:18 boinc_lockfile
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 06:18 pandaJob.out
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas        57 Jan  8 06:18 setup.sh.local
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas    989835 Jan  8 06:19 agis_schedconf.cvmfs.json
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas   1516240 Jan  8 06:19 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:17:31] drwx------ 5 boincer umatlas      4096 Jan  8 06:19 pilot3
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas      5910 Jan  8 09:12 init_data.xml
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas 218402873 Jan  8 09:15 HITS.47898826._020985.pool.root.1
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas       531 Jan  8 09:16 boinc_task_state.xml
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas      1050 Jan  8 09:16 memory_monitor_summary.json
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas    407437 Jan  8 09:16 log.47898826._020985.job.log.tgz.1
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas        95 Jan  8 09:16 pilot_heartbeat.json
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas      7843 Jan  8 09:16 heartbeat.json
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 09:16 boinc_mmap_file
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas        28 Jan  8 09:16 wrapper_checkpoint.txt
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas      4931 Jan  8 09:17 pilotlog.txt
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas   1476727 Jan  8 09:17 log.47898826._020985.job.log.1
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas       357 Jan  8 09:17 output.list
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas       620 Jan  8 09:17 runtime_log
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas   1904640 Jan  8 09:17 result.tar.gz
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas      9338 Jan  8 09:17 runtime_log.err
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas       662 Jan  8 09:17 pdsKDmyD0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnqjKDmHlBfUn.diag
[2026-01-08 09:17:31] -rw-r--r-- 1 boincer umatlas     21313 Jan  8 09:17 stderr.txt
[2026-01-08 09:17:31] HITS file was successfully produced:
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas 218402873 Jan  8 09:15 shared/HITS.pool.root.1
[2026-01-08 09:17:31]  *** Contents of shared directory: ***
[2026-01-08 09:17:31] total 435648
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas 225175539 Jan  8 06:18 ATLAS.root_0
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 06:18 input.tar.gz
[2026-01-08 09:17:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 06:18 start_atlas.sh
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas 218402873 Jan  8 09:15 HITS.pool.root.1
[2026-01-08 09:17:31] -rw------- 1 boincer umatlas   1904640 Jan  8 09:17 result.tar.gz
09:17:33 (30144): run_atlas exited; CPU time 79972.864198
09:17:33 (30144): called boinc_finish(0)

</stderr_txt>
]]>

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