Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:18:06 (1078703): wrapper (7.7.26015): starting
13:18:06 (1078703): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 13:18:06] Arguments: --nthreads 4
[2026-01-08 13:18:06] Threads: 4
[2026-01-08 13:18:06] Checking for CVMFS
[2026-01-08 13:18:06] No cvmfs_config command found, will try listing directly
[2026-01-08 13:18:06] CVMFS is ok
[2026-01-08 13:18:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:18:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:18:06] Further information can be found at the LHC@home message board.
[2026-01-08 13:18:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:18:06] Checking for apptainer binary...
[2026-01-08 13:18:06] which: no apptainer in ((null))
[2026-01-08 13:18:06] apptainer is not installed, using version from CVMFS
[2026-01-08 13:18:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:18:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-01-08 13:18:06] apptainer works
[2026-01-08 13:18:06] Set ATHENA_PROC_NUMBER=4
[2026-01-08 13:18:06] Set ATHENA_CORE_NUMBER=4
[2026-01-08 13:18:06] Starting ATLAS job with PandaID=6962919948
[2026-01-08 13:18:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:38:12]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:38:12] 2026-01-08 16:34:48,609 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 17:38:12] 2026-01-08 16:34:48,618 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2608.0307500000004
[2026-01-08 17:38:12] 2026-01-08 16:34:48,626 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6962919948/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,626 | INFO     | extracted standard info from prmon json
[2026-01-08 17:38:12] 2026-01-08 16:34:48,626 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:38:12] 2026-01-08 16:34:48,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:38:12] 2026-01-08 16:34:48,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:38:12] 2026-01-08 16:34:48,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:38:12] 2026-01-08 16:34:48,630 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:38:12] 2026-01-08 16:34:48,630 | INFO     | sum of square deviations: 4962187923.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,631 | INFO     | sum of deviations: -27089346894.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,631 | INFO     | mean x: 1767882383.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,631 | INFO     | mean y: 2342583.5714285714
[2026-01-08 17:38:12] 2026-01-08 16:34:48,631 | INFO     | intersect: 9653484357.635803
[2026-01-08 17:38:12] 2026-01-08 16:34:48,631 | INFO     | chi2: 2.3088396870991286
[2026-01-08 17:38:12] 2026-01-08 16:34:48,632 | INFO     | sum of square deviations: 4672638308.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | sum of deviations: -10714190365.000002
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | mean x: 1767882231.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | mean y: 2351072.789473684
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | intersect: 4056040983.563305
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | chi2: 1.5017160889997627
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | current chi2=1.5017160889997627 (change=34.95797489142487 %)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,633 | INFO     | sum of square deviations: 4394577280.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,634 | INFO     | sum of deviations: -10583371777.999998
[2026-01-08 17:38:12] 2026-01-08 16:34:48,634 | INFO     | mean x: 1767882078.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | mean y: 2351144.5454545454
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | intersect: 4259905876.703925
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | chi2: 1.5008462601987025
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | current chi2=1.5008462601987025 (change=0.05792232016636351 %)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | right removable region: 241
[2026-01-08 17:38:12] 2026-01-08 16:34:48,635 | INFO     | sum of square deviations: 4672638308.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,636 | INFO     | sum of deviations: -52037012031.00001
[2026-01-08 17:38:12] 2026-01-08 16:34:48,636 | INFO     | mean x: 1767882536.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,636 | INFO     | mean y: 2355530.659919028
[2026-01-08 17:38:12] 2026-01-08 16:34:48,636 | INFO     | intersect: 19690445798.148006
[2026-01-08 17:38:12] 2026-01-08 16:34:48,636 | INFO     | chi2: 1.1153610814557338
[2026-01-08 17:38:12] 2026-01-08 16:34:48,637 | INFO     | current chi2=1.1153610814557338 (change=51.691705245369576 %)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,637 | INFO     | sum of square deviations: 4394577280.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | sum of deviations: -40259076429.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | mean x: 1767882688.5
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | mean y: 2349060.76446281
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | intersect: 16198064764.872774
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | chi2: 1.060037472365814
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | current chi2=1.060037472365814 (change=4.960152367672111 %)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | left removable region: 20
[2026-01-08 17:38:12] 2026-01-08 16:34:48,638 | INFO     | sum of square deviations: 3346927870.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,639 | INFO     | sum of deviations: 1194998357.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,639 | INFO     | mean x: 1767882658.0
[2026-01-08 17:38:12] 2026-01-08 16:34:48,639 | INFO     | mean y: 2342236.4253393663
[2026-01-08 17:38:12] 2026-01-08 16:34:48,639 | INFO     | intersect: -628868519.7475426
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | chi2: 0.03162967504511454
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | current memory leak: 0.36 B/s (using 221 data points, chi2=0.03)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | could have reported an average CPU frequency of 2649 MHz (12 samples)
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | ..............................
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . Timing measurements:
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . get job = 0 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . initial setup = 1 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . payload setup = 6 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . stage-in = 0 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,640 | INFO     | . payload execution = 15349 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,641 | INFO     | . stage-out = 1 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,641 | INFO     | . log creation = 0 s
[2026-01-08 17:38:12] 2026-01-08 16:34:48,641 | INFO     | ..............................
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | 
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | job summary report
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | --------------------------------------------------
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | PanDA job id: 6962919948
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | task id: 47898826
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | errors: (none)
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | pilot state: finished 
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | transexitcode: 0
[2026-01-08 17:38:12] 2026-01-08 16:34:49,128 | INFO     | exeerrorcode: 0
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | exeerrordiag: 
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | exitcode: 0
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | exitmsg: OK
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | cpuconsumptiontime: 59710 s
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | nevents: 400
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | neventsw: 0
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | pid: 1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | pgrp: 1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | corecount: 4
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | event service: False
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | sizes: {0: 2283980, 5: 2284242, 11: 2284298, 15359: 2315343, 15360: 2315342, 15361: 2324418, 15364: 2324602, 15372: 2324796}
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | --------------------------------------------------
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | 
[2026-01-08 17:38:12] 2026-01-08 16:34:49,129 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-08 17:38:12] 2026-01-08 16:34:49,152 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | job 6962919948 has completed (purged errors)
[2026-01-08 17:38:12] 2026-01-08 16:34:49,154 | INFO     | overall cleanup function is called
[2026-01-08 17:38:12] 2026-01-08 16:34:50,161 | INFO     | --- collectZombieJob: --- 10, [1089682]
[2026-01-08 17:38:12] 2026-01-08 16:34:50,162 | INFO     | zombie collector waiting for pid 1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:50,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:38:12] 2026-01-08 16:34:50,162 | INFO     | collected zombie processes
[2026-01-08 17:38:12] 2026-01-08 16:34:50,162 | INFO     | will attempt to kill all subprocesses of pid=1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:50,588 | INFO     | process IDs to be killed: [1089682] (in reverse order)
[2026-01-08 17:38:12] 2026-01-08 16:34:50,716 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:38:12] 2026-01-08 16:34:50,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:38:12] 2026-01-08 16:34:50,731 | INFO     | did not find any defunct processes belonging to 1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:50,745 | INFO     | did not find any defunct processes belonging to 1089682
[2026-01-08 17:38:12] 2026-01-08 16:34:50,746 | INFO     | ready for new job
[2026-01-08 17:38:12] 2026-01-08 16:34:50,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:38:12] 2026-01-08 16:34:50,749 | INFO     | ***************************************
[2026-01-08 17:38:12] 2026-01-08 16:34:50,749 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:38:12] 2026-01-08 16:34:50,749 | INFO     | ***************************************
[2026-01-08 17:38:12] 2026-01-08 16:34:50,749 | INFO     | 
[2026-01-08 17:38:12] 2026-01-08 16:34:50,754 | INFO     | architecture information:
[2026-01-08 17:38:12] 2026-01-08 16:34:50,754 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:38:12] 2026-01-08 16:34:50,772 | INFO     | cat /etc/os-release:
[2026-01-08 17:38:12] NAME="CentOS Linux"
[2026-01-08 17:38:12] VERSION="7 (Core)"
[2026-01-08 17:38:12] ID="centos"
[2026-01-08 17:38:12] ID_LIKE="rhel fedora"
[2026-01-08 17:38:12] VERSION_ID="7"
[2026-01-08 17:38:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:38:12] ANSI_COLOR="0;31"
[2026-01-08 17:38:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:38:12] HOME_URL="https://www.centos.org/"
[2026-01-08 17:38:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:38:12] 
[2026-01-08 17:38:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:38:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:38:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:38:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:38:12] 
[2026-01-08 17:38:12] 2026-01-08 16:34:50,773 | INFO     | ***************************************
[2026-01-08 17:38:12] 2026-01-08 16:34:51,274 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-08 17:38:12] 2026-01-08 16:34:51,295 | INFO     | sufficient remaining disk space (691918602240 B)
[2026-01-08 17:38:12] 2026-01-08 16:34:51,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:38:12] 2026-01-08 16:34:51,296 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:38:12] 2026-01-08 16:34:51,296 | INFO     | update_server=False
[2026-01-08 17:38:12] 2026-01-08 16:34:51,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:38:12] 2026-01-08 16:34:51,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:38:12] 2026-01-08 16:34:51,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:38:12] 2026-01-08 16:34:51,429 | INFO     | all job control threads have been joined
[2026-01-08 17:38:12] 2026-01-08 16:34:51,535 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:38:12] 2026-01-08 16:34:51,535 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:38:12] 2026-01-08 16:34:51,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:38:12] 2026-01-08 16:34:51,535 | INFO     | will abort loop
[2026-01-08 17:38:12] 2026-01-08 16:34:51,801 | INFO     | all payload control threads have been joined
[2026-01-08 17:38:12] 2026-01-08 16:34:52,016 | INFO     | all data control threads have been joined
[2026-01-08 17:38:12] 2026-01-08 16:34:52,302 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:52,434 | INFO     | [job] control thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:52,443 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:52,540 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:52,803 | INFO     | [payload] control thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,022 | INFO     | [data] control thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,105 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,117 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,280 | INFO     | [job] validate thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,302 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,545 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,668 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,698 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:53,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:38:12] 2026-01-08 16:34:53,778 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:54,712 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:34:55,309 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:38:12] 2026-01-08 16:35:21,727 | INFO     | PID=1082793 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:38:12] 2026-01-08 16:35:21,727 | INFO     | .. there are 4 such processes running
[2026-01-08 17:38:12] 2026-01-08 16:35:21,729 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:38:12] 2026-01-08 16:35:21,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:38:12] 2026-01-08 16:35:21,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:38:12] 2026-01-08 16:35:45,305 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:38:12] 2026-01-08 16:35:45,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22365076059968)>', '<ExcThread(monitor, started 22364362368768)>']
[2026-01-08 17:38:12] 2026-01-08 16:35:45,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:38:12] 2026-01-08 16:35:45,841 | INFO     | [monitor] control thread has ended
[2026-01-08 17:38:12] 2026-01-08 16:35:50,752 | INFO     | all workflow threads have been joined
[2026-01-08 17:38:12] 2026-01-08 16:35:50,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:38:12] 2026-01-08 16:35:50,752 | INFO     | traces error code: 0
[2026-01-08 17:38:12] 2026-01-08 16:35:50,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:38:12] 2026-01-08 16:35:50,965 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:38:12] 2026-01-08 16:35:50,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:38:12] 2026-01-08 16:35:50,971 [wrapper] pilotpid: 1082793
[2026-01-08 17:38:12] 2026-01-08 16:35:50,974 [wrapper] Pilot exit status: 0
[2026-01-08 17:38:12] 2026-01-08 16:35:50,986 [wrapper] pandaids: 6962919948
[2026-01-08 17:38:12] 2026-01-08 16:35:51,068 [wrapper] cleanup supervisor_pilot 1326493 1082794
[2026-01-08 17:38:12] 2026-01-08 16:35:51,072 [wrapper] Test setup, not cleaning
[2026-01-08 17:38:12] 2026-01-08 16:35:51,075 [wrapper] apfmon messages muted
[2026-01-08 17:38:12] 2026-01-08 16:35:51,078 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:38:12] 2026-01-08 16:35:51,081 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:38:12]  *** Error codes and diagnostics ***
[2026-01-08 17:38:12]     "exeErrorCode": 0,
[2026-01-08 17:38:12]     "exeErrorDiag": "",
[2026-01-08 17:38:12]     "pilotErrorCode": 0,
[2026-01-08 17:38:12]     "pilotErrorDiag": "",
[2026-01-08 17:38:12]  *** Listing of results directory ***
[2026-01-08 17:38:12] total 442368
[2026-01-08 17:38:12] -rwx------ 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc       100 Jan  8 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:38:12] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 12:20 run_atlas
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc       105 Jan  8 12:20 job.xml
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc      6636 Jan  8 13:18 init_data.xml
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc 226164086 Jan  8 13:18 EVNT.47898824._000820.pool.root.1
[2026-01-08 17:38:12] drwxrwx--x 2 boinc boinc      4096 Jan  8 13:18 shared
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc    592401 Jan  8 13:18 input.tar.gz
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:18 start_atlas.sh
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc         0 Jan  8 13:18 boinc_lockfile
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc      2519 Jan  8 13:18 pandaJob.out
[2026-01-08 17:38:12] -rw------- 1 boinc boinc    989835 Jan  8 13:18 agis_schedconf.cvmfs.json
[2026-01-08 17:38:12] drwx------ 5 boinc boinc      4096 Jan  8 13:18 pilot3
[2026-01-08 17:38:12] -rw------- 1 boinc boinc 217741038 Jan  8 17:33 HITS.47898826._021682.pool.root.1
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc       528 Jan  8 17:34 boinc_task_state.xml
[2026-01-08 17:38:12] -rw------- 1 boinc boinc      1035 Jan  8 17:34 memory_monitor_summary.json
[2026-01-08 17:38:12] -rw------- 1 boinc boinc   1516240 Jan  8 17:34 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:38:12] -rw------- 1 boinc boinc    415418 Jan  8 17:34 log.47898826._021682.job.log.tgz.1
[2026-01-08 17:38:12] -rw------- 1 boinc boinc      7827 Jan  8 17:34 heartbeat.json
[2026-01-08 17:38:12] -rw------- 1 boinc boinc        95 Jan  8 17:35 pilot_heartbeat.json
[2026-01-08 17:38:12] -rw------- 1 boinc boinc      5019 Jan  8 17:35 pilotlog.txt
[2026-01-08 17:38:12] -rw------- 1 boinc boinc   2167850 Jan  8 17:35 log.47898826._021682.job.log.1
[2026-01-08 17:38:12] -rw------- 1 boinc boinc       357 Jan  8 17:35 output.list
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc       620 Jan  8 17:35 runtime_log
[2026-01-08 17:38:12] -rw------- 1 boinc boinc   2600960 Jan  8 17:35 result.tar.gz
[2026-01-08 17:38:12] -rw------- 1 boinc boinc       666 Jan  8 17:35 yPzNDmjE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzleKDmDkZWWm.diag
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc      9206 Jan  8 17:35 runtime_log.err
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc        26 Jan  8 17:38 wrapper_checkpoint.txt
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc      8192 Jan  8 17:38 boinc_mmap_file
[2026-01-08 17:38:12] -rw-r--r-- 1 boinc boinc     20878 Jan  8 17:38 stderr.txt
[2026-01-08 17:38:12] HITS file was successfully produced:
[2026-01-08 17:38:12] -rw------- 1 boinc boinc 217741038 Jan  8 17:33 shared/HITS.pool.root.1
[2026-01-08 17:38:12]  *** Contents of shared directory: ***
[2026-01-08 17:38:12] total 436648
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc 226164086 Jan  8 13:18 ATLAS.root_0
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc    592401 Jan  8 13:18 input.tar.gz
[2026-01-08 17:38:12] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:18 start_atlas.sh
[2026-01-08 17:38:12] -rw------- 1 boinc boinc 217741038 Jan  8 17:33 HITS.pool.root.1
[2026-01-08 17:38:12] -rw------- 1 boinc boinc   2600960 Jan  8 17:35 result.tar.gz
17:38:14 (1078703): run_atlas exited; CPU time 60392.924499
17:38:14 (1078703): called boinc_finish(0)

</stderr_txt>
]]>

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