Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:23 (1552950): wrapper (7.7.26015): starting
12:52:23 (1552950): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 12:52:23] Arguments: --nthreads 4
[2026-01-08 12:52:23] Threads: 4
[2026-01-08 12:52:23] Checking for CVMFS
[2026-01-08 12:52:23] No cvmfs_config command found, will try listing directly
[2026-01-08 12:52:23] CVMFS is ok
[2026-01-08 12:52:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:52:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:52:23] Further information can be found at the LHC@home message board.
[2026-01-08 12:52:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:52:23] Checking for apptainer binary...
[2026-01-08 12:52:23] which: no apptainer in ((null))
[2026-01-08 12:52:23] apptainer is not installed, using version from CVMFS
[2026-01-08 12:52:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:52:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-08 12:52:23] apptainer works
[2026-01-08 12:52:23] Set ATHENA_PROC_NUMBER=4
[2026-01-08 12:52:23] Set ATHENA_CORE_NUMBER=4
[2026-01-08 12:52:23] Starting ATLAS job with PandaID=6962916966
[2026-01-08 12:52:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:45:52]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:45:52] 2026-01-08 15:36:19,105 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 16:45:52] 2026-01-08 15:36:19,131 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2635.523320312501
[2026-01-08 16:45:52] 2026-01-08 15:36:19,157 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6962916966/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,158 | INFO     | extracted standard info from prmon json
[2026-01-08 16:45:52] 2026-01-08 15:36:19,158 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:45:52] 2026-01-08 15:36:19,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:45:52] 2026-01-08 15:36:19,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:45:52] 2026-01-08 15:36:19,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:45:52] 2026-01-08 15:36:19,163 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:45:52] 2026-01-08 15:36:19,164 | INFO     | sum of square deviations: 3301699115.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,166 | INFO     | sum of deviations: -8723469578.000008
[2026-01-08 16:45:52] 2026-01-08 15:36:19,166 | INFO     | mean x: 1767879872.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,166 | INFO     | mean y: 2331491.118181818
[2026-01-08 16:45:52] 2026-01-08 15:36:19,166 | INFO     | intersect: 4673273859.927062
[2026-01-08 16:45:52] 2026-01-08 15:36:19,167 | INFO     | chi2: 2.163832787332374
[2026-01-08 16:45:52] 2026-01-08 15:36:19,167 | INFO     | sum of square deviations: 3081657780.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,169 | INFO     | sum of deviations: 5302996143.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,169 | INFO     | mean x: 1767879720.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,169 | INFO     | mean y: 2341036.423255814
[2026-01-08 16:45:52] 2026-01-08 15:36:19,169 | INFO     | intersect: -3039871955.9771914
[2026-01-08 16:45:52] 2026-01-08 15:36:19,170 | INFO     | chi2: 1.3701774571633847
[2026-01-08 16:45:52] 2026-01-08 15:36:19,170 | INFO     | current chi2=1.3701774571633847 (change=36.67821907567207 %)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,170 | INFO     | sum of square deviations: 2871616632.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | sum of deviations: 5197595249.500001
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | mean x: 1767879567.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | mean y: 2340959.5761904763
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | intersect: -3197502061.853348
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | chi2: 1.3705438149159075
[2026-01-08 16:45:52] 2026-01-08 15:36:19,172 | INFO     | current chi2=1.3705438149159075 (change=-0.026737978398889972 %)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,173 | INFO     | right removable region: 209
[2026-01-08 16:45:52] 2026-01-08 15:36:19,173 | INFO     | sum of square deviations: 3081657780.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,174 | INFO     | sum of deviations: -35599452990.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,175 | INFO     | mean x: 1767880025.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,175 | INFO     | mean y: 2349883.3441860466
[2026-01-08 16:45:52] 2026-01-08 15:36:19,175 | INFO     | intersect: 20424981575.415955
[2026-01-08 16:45:52] 2026-01-08 15:36:19,175 | INFO     | chi2: 0.8642586829057479
[2026-01-08 16:45:52] 2026-01-08 15:36:19,175 | INFO     | current chi2=0.8642586829057479 (change=60.058896973678486 %)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,176 | INFO     | sum of square deviations: 2871616632.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,177 | INFO     | sum of deviations: -34375235175.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | mean x: 1767880177.5
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | mean y: 2348979.938095238
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | intersect: 21165096185.0761
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | chi2: 0.8615942543345482
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | current chi2=0.8615942543345482 (change=0.3082906337997788 %)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,178 | INFO     | left removable region: 20
[2026-01-08 16:45:52] 2026-01-08 15:36:19,179 | INFO     | sum of square deviations: 2093397390.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,180 | INFO     | sum of deviations: -14919479734.999994
[2026-01-08 16:45:52] 2026-01-08 15:36:19,180 | INFO     | mean x: 1767880147.0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,180 | INFO     | mean y: 2355583.544973545
[2026-01-08 16:45:52] 2026-01-08 15:36:19,180 | INFO     | intersect: 12601899345.790379
[2026-01-08 16:45:52] 2026-01-08 15:36:19,181 | INFO     | chi2: 0.04408493485385645
[2026-01-08 16:45:52] 2026-01-08 15:36:19,181 | INFO     | current memory leak: -7.13 B/s (using 189 data points, chi2=0.04)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | could have reported an average CPU frequency of 2680 MHz (11 samples)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | ..............................
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . Timing measurements:
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . get job = 0 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . initial setup = 1 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . payload setup = 9 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . stage-in = 0 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . payload execution = 13379 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . stage-out = 1 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,182 | INFO     | . log creation = 0 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,183 | INFO     | ..............................
[2026-01-08 16:45:52] 2026-01-08 15:36:19,290 | INFO     | 
[2026-01-08 16:45:52] 2026-01-08 15:36:19,290 | INFO     | job summary report
[2026-01-08 16:45:52] 2026-01-08 15:36:19,290 | INFO     | --------------------------------------------------
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | PanDA job id: 6962916966
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | task id: 47898826
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | errors: (none)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | pilot state: finished 
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | transexitcode: 0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | exeerrorcode: 0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | exeerrordiag: 
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | exitcode: 0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | exitmsg: OK
[2026-01-08 16:45:52] 2026-01-08 15:36:19,291 | INFO     | cpuconsumptiontime: 51320 s
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | nevents: 400
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | neventsw: 0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | pid: 1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | pgrp: 1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | corecount: 4
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | event service: False
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | sizes: {0: 2283981, 1: 2283981, 7: 2284271, 11: 2284299, 13392: 2315157, 13394: 2324363, 13402: 2324501}
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | --------------------------------------------------
[2026-01-08 16:45:52] 2026-01-08 15:36:19,292 | INFO     | 
[2026-01-08 16:45:52] 2026-01-08 15:36:19,293 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,326 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:45:52] 2026-01-08 15:36:19,326 | INFO     | job 6962916966 has completed (purged errors)
[2026-01-08 16:45:52] 2026-01-08 15:36:19,326 | INFO     | overall cleanup function is called
[2026-01-08 16:45:52] 2026-01-08 15:36:20,335 | INFO     | --- collectZombieJob: --- 10, [1564420]
[2026-01-08 16:45:52] 2026-01-08 15:36:20,335 | INFO     | zombie collector waiting for pid 1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:20,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:45:52] 2026-01-08 15:36:20,335 | INFO     | collected zombie processes
[2026-01-08 16:45:52] 2026-01-08 15:36:20,336 | INFO     | will attempt to kill all subprocesses of pid=1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:21,026 | INFO     | process IDs to be killed: [1564420] (in reverse order)
[2026-01-08 16:45:52] 2026-01-08 15:36:21,275 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:45:52] 2026-01-08 15:36:21,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:45:52] 2026-01-08 15:36:21,312 | INFO     | did not find any defunct processes belonging to 1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:21,347 | INFO     | did not find any defunct processes belonging to 1564420
[2026-01-08 16:45:52] 2026-01-08 15:36:21,348 | INFO     | ready for new job
[2026-01-08 16:45:52] 2026-01-08 15:36:21,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:45:52] 2026-01-08 15:36:21,351 | INFO     | ***************************************
[2026-01-08 16:45:52] 2026-01-08 15:36:21,351 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:45:52] 2026-01-08 15:36:21,351 | INFO     | ***************************************
[2026-01-08 16:45:52] 2026-01-08 15:36:21,351 | INFO     | 
[2026-01-08 16:45:52] 2026-01-08 15:36:21,360 | INFO     | architecture information:
[2026-01-08 16:45:52] 2026-01-08 15:36:21,361 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:45:52] 2026-01-08 15:36:21,382 | INFO     | cat /etc/os-release:
[2026-01-08 16:45:52] NAME="CentOS Linux"
[2026-01-08 16:45:52] VERSION="7 (Core)"
[2026-01-08 16:45:52] ID="centos"
[2026-01-08 16:45:52] ID_LIKE="rhel fedora"
[2026-01-08 16:45:52] VERSION_ID="7"
[2026-01-08 16:45:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:45:52] ANSI_COLOR="0;31"
[2026-01-08 16:45:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:45:52] HOME_URL="https://www.centos.org/"
[2026-01-08 16:45:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:45:52] 
[2026-01-08 16:45:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:45:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:45:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:45:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:45:52] 
[2026-01-08 16:45:52] 2026-01-08 15:36:21,382 | INFO     | ***************************************
[2026-01-08 16:45:52] 2026-01-08 15:36:21,885 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-01-08 16:45:52] 2026-01-08 15:36:21,908 | INFO     | sufficient remaining disk space (3334341656576 B)
[2026-01-08 16:45:52] 2026-01-08 15:36:21,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:45:52] 2026-01-08 15:36:21,909 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:45:52] 2026-01-08 15:36:21,909 | INFO     | update_server=False
[2026-01-08 16:45:52] 2026-01-08 15:36:21,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:45:52] 2026-01-08 15:36:21,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:45:52] 2026-01-08 15:36:22,296 | INFO     | all data control threads have been joined
[2026-01-08 16:45:52] 2026-01-08 15:36:22,341 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 16:45:52] 2026-01-08 15:36:22,341 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 16:45:52] 2026-01-08 15:36:22,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:45:52] 2026-01-08 15:36:22,341 | INFO     | will abort loop
[2026-01-08 16:45:52] 2026-01-08 15:36:22,482 | INFO     | all payload control threads have been joined
[2026-01-08 16:45:52] 2026-01-08 15:36:22,915 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:22,918 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,072 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,223 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,301 | INFO     | [data] control thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:45:52] 2026-01-08 15:36:23,346 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,436 | INFO     | all job control threads have been joined
[2026-01-08 16:45:52] 2026-01-08 15:36:23,487 | INFO     | [payload] control thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,504 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,886 | INFO     | [job] validate thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:23,917 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:24,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:45:52] 2026-01-08 15:36:24,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:24,303 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:24,442 | INFO     | [job] control thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:25,304 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:25,344 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:25,916 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:45:52] 2026-01-08 15:36:52,985 | INFO     | PID=1557035 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:45:52] 2026-01-08 15:36:52,985 | INFO     | .. there are 5 such processes running
[2026-01-08 16:45:52] 2026-01-08 15:36:52,985 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:45:52] 2026-01-08 15:36:52,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:45:52] 2026-01-08 15:36:52,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:45:52] 2026-01-08 15:36:59,778 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:45:52] 2026-01-08 15:37:00,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22453605472064)>', '<ExcThread(monitor, started 22453357065984)>']
[2026-01-08 16:45:52] 2026-01-08 15:37:01,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:45:52] 2026-01-08 15:37:01,026 | INFO     | [monitor] control thread has ended
[2026-01-08 16:45:52] 2026-01-08 15:37:05,296 | INFO     | all workflow threads have been joined
[2026-01-08 16:45:52] 2026-01-08 15:37:05,296 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:45:52] 2026-01-08 15:37:05,297 | INFO     | traces error code: 0
[2026-01-08 16:45:52] 2026-01-08 15:37:05,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:45:52] 2026-01-08 15:37:05,455 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:45:52] 2026-01-08 15:37:05,462 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:45:52] 2026-01-08 15:37:05,466 [wrapper] pilotpid: 1557035
[2026-01-08 16:45:52] 2026-01-08 15:37:05,470 [wrapper] Pilot exit status: 0
[2026-01-08 16:45:52] 2026-01-08 15:37:05,485 [wrapper] pandaids: 6962916966
[2026-01-08 16:45:52] 2026-01-08 15:37:05,656 [wrapper] cleanup supervisor_pilot 1815899 1557036
[2026-01-08 16:45:52] 2026-01-08 15:37:05,660 [wrapper] Test setup, not cleaning
[2026-01-08 16:45:52] 2026-01-08 15:37:05,663 [wrapper] apfmon messages muted
[2026-01-08 16:45:52] 2026-01-08 15:37:05,665 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:45:52] 2026-01-08 15:37:05,668 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:45:52]  *** Error codes and diagnostics ***
[2026-01-08 16:45:52]     "exeErrorCode": 0,
[2026-01-08 16:45:52]     "exeErrorDiag": "",
[2026-01-08 16:45:52]     "pilotErrorCode": 0,
[2026-01-08 16:45:52]     "pilotErrorDiag": "",
[2026-01-08 16:45:52]  *** Listing of results directory ***
[2026-01-08 16:45:52] total 439188
[2026-01-08 16:45:52] -rwx------ 1 boinc boinc     36322 Jan  8 09:05 runpilot2-wrapper.sh
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc       100 Jan  8 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:45:52] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 11:54 run_atlas
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc       105 Jan  8 11:54 job.xml
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc 224642760 Jan  8 12:52 EVNT.47898824._000633.pool.root.1
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc      6691 Jan  8 12:52 init_data.xml
[2026-01-08 16:45:52] drwxrwx--x 2 boinc boinc      4096 Jan  8 12:52 shared
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc    592399 Jan  8 12:52 input.tar.gz
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc     15847 Jan  8 12:52 start_atlas.sh
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc         0 Jan  8 12:52 boinc_lockfile
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc      2519 Jan  8 12:52 pandaJob.out
[2026-01-08 16:45:52] -rw------- 1 boinc boinc    989835 Jan  8 12:52 agis_schedconf.cvmfs.json
[2026-01-08 16:45:52] drwx------ 5 boinc boinc      4096 Jan  8 12:52 pilot3
[2026-01-08 16:45:52] -rw------- 1 boinc boinc 216658968 Jan  8 16:35 HITS.47898826._019266.pool.root.1
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc       528 Jan  8 16:35 boinc_task_state.xml
[2026-01-08 16:45:52] -rw------- 1 boinc boinc      1046 Jan  8 16:36 memory_monitor_summary.json
[2026-01-08 16:45:52] -rw------- 1 boinc boinc   1516240 Jan  8 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:45:52] -rw------- 1 boinc boinc    399180 Jan  8 16:36 log.47898826._019266.job.log.tgz.1
[2026-01-08 16:45:52] -rw------- 1 boinc boinc        95 Jan  8 16:36 pilot_heartbeat.json
[2026-01-08 16:45:52] -rw------- 1 boinc boinc      7790 Jan  8 16:36 heartbeat.json
[2026-01-08 16:45:52] -rw------- 1 boinc boinc      5021 Jan  8 16:37 pilotlog.txt
[2026-01-08 16:45:52] -rw------- 1 boinc boinc   1857424 Jan  8 16:37 log.47898826._019266.job.log.1
[2026-01-08 16:45:52] -rw------- 1 boinc boinc       357 Jan  8 16:37 output.list
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc       620 Jan  8 16:37 runtime_log
[2026-01-08 16:45:52] -rw------- 1 boinc boinc   2273280 Jan  8 16:37 result.tar.gz
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc      9223 Jan  8 16:37 runtime_log.err
[2026-01-08 16:45:52] -rw------- 1 boinc boinc       666 Jan  8 16:37 ocxNDmzC0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMkjKDmKxy2Km.diag
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc        26 Jan  8 16:45 wrapper_checkpoint.txt
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc      8192 Jan  8 16:45 boinc_mmap_file
[2026-01-08 16:45:52] -rw-r--r-- 1 boinc boinc     20867 Jan  8 16:45 stderr.txt
[2026-01-08 16:45:52] HITS file was successfully produced:
[2026-01-08 16:45:52] -rw------- 1 boinc boinc 216658968 Jan  8 16:35 shared/HITS.pool.root.1
[2026-01-08 16:45:52]  *** Contents of shared directory: ***
[2026-01-08 16:45:52] total 433788
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc 224642760 Jan  8 12:52 ATLAS.root_0
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc    592399 Jan  8 12:52 input.tar.gz
[2026-01-08 16:45:52] -rw-r--r-- 2 boinc boinc     15847 Jan  8 12:52 start_atlas.sh
[2026-01-08 16:45:52] -rw------- 1 boinc boinc 216658968 Jan  8 16:35 HITS.pool.root.1
[2026-01-08 16:45:52] -rw------- 1 boinc boinc   2273280 Jan  8 16:37 result.tar.gz
16:45:53 (1552950): run_atlas exited; CPU time 52259.773295
16:45:53 (1552950): called boinc_finish(0)

</stderr_txt>
]]>

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