Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:04 (3857438): wrapper (7.7.26015): starting
00:12:04 (3857438): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 00:12:04] Arguments: --nthreads 4
[2026-01-11 00:12:04] Threads: 4
[2026-01-11 00:12:04] Checking for CVMFS
[2026-01-11 00:12:04] No cvmfs_config command found, will try listing directly
[2026-01-11 00:12:04] CVMFS is ok
[2026-01-11 00:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 00:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 00:12:04] Further information can be found at the LHC@home message board.
[2026-01-11 00:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 00:12:04] Checking for apptainer binary...
[2026-01-11 00:12:04] which: no apptainer in ((null))
[2026-01-11 00:12:04] apptainer is not installed, using version from CVMFS
[2026-01-11 00:12:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 00:12:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-11 00:12:04] apptainer works
[2026-01-11 00:12:04] Set ATHENA_PROC_NUMBER=4
[2026-01-11 00:12:04] Set ATHENA_CORE_NUMBER=4
[2026-01-11 00:12:04] Starting ATLAS job with PandaID=6962918691
[2026-01-11 00:12:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:36:26]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:36:26] 2026-01-11 03:34:56,031 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:36:26] 2026-01-11 03:34:56,452 | INFO     | time since job start (15760s) is within the limit (174528.0s)
[2026-01-11 04:36:26] 2026-01-11 03:34:57,694 | INFO     | monitor loop #1135: job 0:6962918691 is in state 'finished'
[2026-01-11 04:36:26] 2026-01-11 03:34:57,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:36:26] 2026-01-11 03:34:58,458 | INFO     | time since job start (15762s) is within the limit (174528.0s)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,197 | INFO     | monitor loop #1136: job 0:6962918691 is in state 'finished'
[2026-01-11 04:36:26] 2026-01-11 03:35:00,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,464 | INFO     | time since job start (15764s) is within the limit (174528.0s)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,818 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 04:36:26] 2026-01-11 03:35:00,828 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2662.68696875
[2026-01-11 04:36:26] 2026-01-11 03:35:00,841 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962918691/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,842 | INFO     | extracted standard info from prmon json
[2026-01-11 04:36:26] 2026-01-11 03:35:00,842 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:36:26] 2026-01-11 03:35:00,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:36:26] 2026-01-11 03:35:00,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:36:26] 2026-01-11 03:35:00,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:36:26] 2026-01-11 03:35:00,848 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:36:26] 2026-01-11 03:35:00,849 | INFO     | sum of square deviations: 5325139844.5
[2026-01-11 04:36:26] 2026-01-11 03:35:00,850 | INFO     | sum of deviations: -21698082012.500004
[2026-01-11 04:36:26] 2026-01-11 03:35:00,851 | INFO     | mean x: 1768094603.5
[2026-01-11 04:36:26] 2026-01-11 03:35:00,851 | INFO     | mean y: 2365095.701550388
[2026-01-11 04:36:26] 2026-01-11 03:35:00,851 | INFO     | intersect: 7206732085.655005
[2026-01-11 04:36:26] 2026-01-11 03:35:00,851 | INFO     | chi2: 1.3960745677603343
[2026-01-11 04:36:26] 2026-01-11 03:35:00,852 | INFO     | sum of square deviations: 5021496942.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | sum of deviations: -21005385685.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | mean x: 1768094451.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | mean y: 2365443.6403162056
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | intersect: 7398467900.683958
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | chi2: 1.3952571701519585
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | current chi2=1.3952571701519585 (change=0.05854970982582721 %)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,854 | INFO     | right removable region: 252
[2026-01-11 04:36:26] 2026-01-11 03:35:00,855 | INFO     | sum of square deviations: 5021496942.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,857 | INFO     | sum of deviations: -49956469292.99999
[2026-01-11 04:36:26] 2026-01-11 03:35:00,857 | INFO     | mean x: 1768094756.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,857 | INFO     | mean y: 2379100.5019762847
[2026-01-11 04:36:26] 2026-01-11 03:35:00,857 | INFO     | intersect: 17592307443.67218
[2026-01-11 04:36:26] 2026-01-11 03:35:00,857 | INFO     | chi2: 0.11463191842353479
[2026-01-11 04:36:26] 2026-01-11 03:35:00,858 | INFO     | current chi2=0.11463191842353479 (change=91.78898311947377 %)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,858 | INFO     | sum of square deviations: 4729621702.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,860 | INFO     | sum of deviations: -41289881391.5
[2026-01-11 04:36:26] 2026-01-11 03:35:00,860 | INFO     | mean x: 1768094908.5
[2026-01-11 04:36:26] 2026-01-11 03:35:00,860 | INFO     | mean y: 2374558.8911290322
[2026-01-11 04:36:26] 2026-01-11 03:35:00,860 | INFO     | intersect: 15437949254.010803
[2026-01-11 04:36:26] 2026-01-11 03:35:00,861 | INFO     | chi2: 0.09092447015891196
[2026-01-11 04:36:26] 2026-01-11 03:35:00,861 | INFO     | current chi2=0.09092447015891196 (change=20.6813674504077 %)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,861 | INFO     | left removable region: 20
[2026-01-11 04:36:26] 2026-01-11 03:35:00,861 | INFO     | sum of square deviations: 3871990738.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,863 | INFO     | sum of deviations: -27401104474.0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,863 | INFO     | mean x: 1768095030.5
[2026-01-11 04:36:26] 2026-01-11 03:35:00,863 | INFO     | mean y: 2367920.5689655175
[2026-01-11 04:36:26] 2026-01-11 03:35:00,863 | INFO     | intersect: 12514731696.448101
[2026-01-11 04:36:26] 2026-01-11 03:35:00,863 | INFO     | chi2: 0.04737881419184849
[2026-01-11 04:36:26] 2026-01-11 03:35:00,864 | INFO     | current memory leak: -7.08 B/s (using 232 data points, chi2=0.05)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,864 | INFO     | could have reported an average CPU frequency of 2555 MHz (12 samples)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,864 | INFO     | ..............................
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . Timing measurements:
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . get job = 0 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . initial setup = 1 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . payload setup = 7 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . stage-in = 0 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . payload execution = 15725 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . stage-out = 1 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | . log creation = 0 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,865 | INFO     | ..............................
[2026-01-11 04:36:26] 2026-01-11 03:35:00,967 | INFO     | 
[2026-01-11 04:36:26] 2026-01-11 03:35:00,967 | INFO     | job summary report
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | --------------------------------------------------
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | PanDA job id: 6962918691
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | task id: 47898826
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | errors: (none)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | pilot state: finished 
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | transexitcode: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | exeerrorcode: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | exeerrordiag: 
[2026-01-11 04:36:26] 2026-01-11 03:35:00,968 | INFO     | exitcode: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | exitmsg: OK
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | cpuconsumptiontime: 60530 s
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | nevents: 400
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | neventsw: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | pid: 3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | pgrp: 3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | corecount: 4
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | event service: False
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | sizes: {0: 2283980, 5: 2284242, 11: 2284298, 15736: 2315570, 15739: 2324590, 15741: 2324646, 15748: 2324968}
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | --------------------------------------------------
[2026-01-11 04:36:26] 2026-01-11 03:35:00,969 | INFO     | 
[2026-01-11 04:36:26] 2026-01-11 03:35:00,970 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,995 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:36:26] 2026-01-11 03:35:00,996 | INFO     | job 6962918691 has completed (purged errors)
[2026-01-11 04:36:26] 2026-01-11 03:35:00,996 | INFO     | overall cleanup function is called
[2026-01-11 04:36:26] 2026-01-11 03:35:02,004 | INFO     | --- collectZombieJob: --- 10, [3868084]
[2026-01-11 04:36:26] 2026-01-11 03:35:02,004 | INFO     | zombie collector waiting for pid 3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:02,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:36:26] 2026-01-11 03:35:02,004 | INFO     | collected zombie processes
[2026-01-11 04:36:26] 2026-01-11 03:35:02,004 | INFO     | will attempt to kill all subprocesses of pid=3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:02,415 | INFO     | process IDs to be killed: [3868084] (in reverse order)
[2026-01-11 04:36:26] 2026-01-11 03:35:02,540 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:36:26] 2026-01-11 03:35:02,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:36:26] 2026-01-11 03:35:02,557 | INFO     | did not find any defunct processes belonging to 3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:02,573 | INFO     | did not find any defunct processes belonging to 3868084
[2026-01-11 04:36:26] 2026-01-11 03:35:02,574 | INFO     | ready for new job
[2026-01-11 04:36:26] 2026-01-11 03:35:02,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:36:26] 2026-01-11 03:35:02,576 | INFO     | ***************************************
[2026-01-11 04:36:26] 2026-01-11 03:35:02,577 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:36:26] 2026-01-11 03:35:02,577 | INFO     | ***************************************
[2026-01-11 04:36:26] 2026-01-11 03:35:02,577 | INFO     | 
[2026-01-11 04:36:26] 2026-01-11 03:35:02,581 | INFO     | architecture information:
[2026-01-11 04:36:26] 2026-01-11 03:35:02,581 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:36:26] 2026-01-11 03:35:02,599 | INFO     | cat /etc/os-release:
[2026-01-11 04:36:26] NAME="CentOS Linux"
[2026-01-11 04:36:26] VERSION="7 (Core)"
[2026-01-11 04:36:26] ID="centos"
[2026-01-11 04:36:26] ID_LIKE="rhel fedora"
[2026-01-11 04:36:26] VERSION_ID="7"
[2026-01-11 04:36:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:36:26] ANSI_COLOR="0;31"
[2026-01-11 04:36:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:36:26] HOME_URL="https://www.centos.org/"
[2026-01-11 04:36:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:36:26] 
[2026-01-11 04:36:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:36:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:36:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:36:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:36:26] 
[2026-01-11 04:36:26] 2026-01-11 03:35:02,599 | INFO     | ***************************************
[2026-01-11 04:36:26] 2026-01-11 03:35:03,102 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 04:36:26] 2026-01-11 03:35:03,120 | INFO     | sufficient remaining disk space (694420504576 B)
[2026-01-11 04:36:26] 2026-01-11 03:35:03,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:36:26] 2026-01-11 03:35:03,121 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:36:26] 2026-01-11 03:35:03,121 | INFO     | update_server=False
[2026-01-11 04:36:26] 2026-01-11 03:35:03,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:36:26] 2026-01-11 03:35:03,225 | INFO     | all payload control threads have been joined
[2026-01-11 04:36:26] 2026-01-11 03:35:03,320 | INFO     | all data control threads have been joined
[2026-01-11 04:36:26] 2026-01-11 03:35:03,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:36:26] 2026-01-11 03:35:03,702 | INFO     | aborting loop
[2026-01-11 04:36:26] 2026-01-11 03:35:04,040 | INFO     | all job control threads have been joined
[2026-01-11 04:36:26] 2026-01-11 03:35:04,126 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,230 | INFO     | [payload] control thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,299 | INFO     | [job] validate thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,323 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,325 | INFO     | [data] control thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:36:26] 2026-01-11 03:35:04,653 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:36:26] 2026-01-11 03:35:04,708 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,758 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:04,829 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:05,045 | INFO     | [job] control thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:05,134 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:05,288 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:05,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:36:26] 2026-01-11 03:35:06,434 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:06,979 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:08,665 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:14,151 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:36:26] 2026-01-11 03:35:15,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:36:26] 2026-01-11 03:35:34,046 | INFO     | PID=3861193 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:36:26] 2026-01-11 03:35:34,047 | INFO     | .. there are 5 such processes running
[2026-01-11 04:36:26] 2026-01-11 03:35:34,048 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:36:26] 2026-01-11 03:35:34,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:36:26] 2026-01-11 03:35:34,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:36:26] 2026-01-11 03:35:41,690 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:36:26] 2026-01-11 03:35:43,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23154094597952)>', '<ExcThread(monitor, started 23153854080768)>']
[2026-01-11 04:36:26] 2026-01-11 03:35:44,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:36:26] 2026-01-11 03:35:44,098 | INFO     | [monitor] control thread has ended
[2026-01-11 04:36:26] 2026-01-11 03:35:48,723 | INFO     | all workflow threads have been joined
[2026-01-11 04:36:26] 2026-01-11 03:35:48,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:36:26] 2026-01-11 03:35:48,724 | INFO     | traces error code: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:48,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:36:26] 2026-01-11 03:35:48,905 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:36:26] 2026-01-11 03:35:48,909 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:36:26] 2026-01-11 03:35:48,912 [wrapper] pilotpid: 3861193
[2026-01-11 04:36:26] 2026-01-11 03:35:48,914 [wrapper] Pilot exit status: 0
[2026-01-11 04:36:26] 2026-01-11 03:35:48,926 [wrapper] pandaids: 6962918691
[2026-01-11 04:36:26] 2026-01-11 03:35:49,034 [wrapper] cleanup supervisor_pilot 4146020 3861194
[2026-01-11 04:36:26] 2026-01-11 03:35:49,038 [wrapper] Test setup, not cleaning
[2026-01-11 04:36:26] 2026-01-11 03:35:49,041 [wrapper] apfmon messages muted
[2026-01-11 04:36:26] 2026-01-11 03:35:49,044 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:36:26] 2026-01-11 03:35:49,046 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:36:26]  *** Error codes and diagnostics ***
[2026-01-11 04:36:26]     "exeErrorCode": 0,
[2026-01-11 04:36:26]     "exeErrorDiag": "",
[2026-01-11 04:36:26]     "pilotErrorCode": 0,
[2026-01-11 04:36:26]     "pilotErrorDiag": "",
[2026-01-11 04:36:26]  *** Listing of results directory ***
[2026-01-11 04:36:26] total 441332
[2026-01-11 04:36:26] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:09 queuedata.json
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc       100 Jan 11 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:36:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 00:11 run_atlas
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc       105 Jan 11 00:11 job.xml
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc 225301002 Jan 11 00:12 EVNT.47898824._000804.pool.root.1
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc      6637 Jan 11 00:12 init_data.xml
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc     15847 Jan 11 00:12 start_atlas.sh
[2026-01-11 04:36:26] drwxrwx--x 2 boinc boinc      4096 Jan 11 00:12 shared
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc    592403 Jan 11 00:12 input.tar.gz
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc         0 Jan 11 00:12 boinc_lockfile
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc      2519 Jan 11 00:12 pandaJob.out
[2026-01-11 04:36:26] -rw------- 1 boinc boinc    989548 Jan 11 00:12 agis_schedconf.cvmfs.json
[2026-01-11 04:36:26] drwx------ 5 boinc boinc      4096 Jan 11 00:12 pilot3
[2026-01-11 04:36:26] -rw------- 1 boinc boinc 217422706 Jan 11 04:34 HITS.47898826._020711.pool.root.1
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc       529 Jan 11 04:34 boinc_task_state.xml
[2026-01-11 04:36:26] -rw------- 1 boinc boinc      1035 Jan 11 04:34 memory_monitor_summary.json
[2026-01-11 04:36:26] -rw------- 1 boinc boinc   1516240 Jan 11 04:34 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:36:26] -rw------- 1 boinc boinc    427411 Jan 11 04:34 log.47898826._020711.job.log.tgz.1
[2026-01-11 04:36:26] -rw------- 1 boinc boinc      7831 Jan 11 04:35 heartbeat.json
[2026-01-11 04:36:26] -rw------- 1 boinc boinc        95 Jan 11 04:35 pilot_heartbeat.json
[2026-01-11 04:36:26] -rw------- 1 boinc boinc      4905 Jan 11 04:35 pilotlog.txt
[2026-01-11 04:36:26] -rw------- 1 boinc boinc   2214529 Jan 11 04:35 log.47898826._020711.job.log.1
[2026-01-11 04:36:26] -rw------- 1 boinc boinc       357 Jan 11 04:35 output.list
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc       620 Jan 11 04:35 runtime_log
[2026-01-11 04:36:26] -rw------- 1 boinc boinc   2662400 Jan 11 04:35 result.tar.gz
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc      9206 Jan 11 04:35 runtime_log.err
[2026-01-11 04:36:26] -rw------- 1 boinc boinc       666 Jan 11 04:35 mqNKDmcB0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvhjKDmVdDH3n.diag
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc        26 Jan 11 04:36 wrapper_checkpoint.txt
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc      8192 Jan 11 04:36 boinc_mmap_file
[2026-01-11 04:36:26] -rw-r--r-- 1 boinc boinc     21178 Jan 11 04:36 stderr.txt
[2026-01-11 04:36:26] HITS file was successfully produced:
[2026-01-11 04:36:26] -rw------- 1 boinc boinc 217422706 Jan 11 04:34 shared/HITS.pool.root.1
[2026-01-11 04:36:26]  *** Contents of shared directory: ***
[2026-01-11 04:36:26] total 435556
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc 225301002 Jan 11 00:12 ATLAS.root_0
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc     15847 Jan 11 00:12 start_atlas.sh
[2026-01-11 04:36:26] -rw-r--r-- 2 boinc boinc    592403 Jan 11 00:12 input.tar.gz
[2026-01-11 04:36:26] -rw------- 1 boinc boinc 217422706 Jan 11 04:34 HITS.pool.root.1
[2026-01-11 04:36:26] -rw------- 1 boinc boinc   2662400 Jan 11 04:35 result.tar.gz
04:36:28 (3857438): run_atlas exited; CPU time 61245.868390
04:36:28 (3857438): called boinc_finish(0)

</stderr_txt>
]]>

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