Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:43:46 (834634): wrapper (7.7.26015): starting
17:43:46 (834634): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 17:43:46] Arguments: --nthreads 4
[2026-01-11 17:43:46] Threads: 4
[2026-01-11 17:43:46] Checking for CVMFS
[2026-01-11 17:43:46] No cvmfs_config command found, will try listing directly
[2026-01-11 17:43:46] CVMFS is ok
[2026-01-11 17:43:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 17:43:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 17:43:46] Further information can be found at the LHC@home message board.
[2026-01-11 17:43:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 17:43:46] Checking for apptainer binary...
[2026-01-11 17:43:46] which: no apptainer in ((null))
[2026-01-11 17:43:46] apptainer is not installed, using version from CVMFS
[2026-01-11 17:43:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 17:43:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-11 17:43:46] apptainer works
[2026-01-11 17:43:46] Set ATHENA_PROC_NUMBER=4
[2026-01-11 17:43:46] Set ATHENA_CORE_NUMBER=4
[2026-01-11 17:43:46] Starting ATLAS job with PandaID=6962917857
[2026-01-11 17:43:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 21:55:17]  *** The last 200 lines of the pilot log: ***
[2026-01-11 21:55:17] 2026-01-11 20:47:36,322 | INFO     | maximum number of monitored processes: 6
[2026-01-11 21:55:17] 2026-01-11 20:47:37,613 | INFO     | time since job start (14620s) is within the limit (174528.0s)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,106 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 21:55:17] 2026-01-11 20:47:38,116 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2600.1814375
[2026-01-11 21:55:17] 2026-01-11 20:47:38,129 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962917857/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,130 | INFO     | extracted standard info from prmon json
[2026-01-11 21:55:17] 2026-01-11 20:47:38,130 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 21:55:17] 2026-01-11 20:47:38,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 21:55:17] 2026-01-11 20:47:38,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 21:55:17] 2026-01-11 20:47:38,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 21:55:17] 2026-01-11 20:47:38,136 | INFO     | fitting pss+swap vs Time
[2026-01-11 21:55:17] 2026-01-11 20:47:38,137 | INFO     | sum of square deviations: 4286517580.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,138 | INFO     | sum of deviations: -42032509086.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,138 | INFO     | mean x: 1768157154.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,138 | INFO     | mean y: 2364771.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,139 | INFO     | intersect: 17340467385.756374
[2026-01-11 21:55:17] 2026-01-11 20:47:38,139 | INFO     | chi2: 2.2605085130207825
[2026-01-11 21:55:17] 2026-01-11 20:47:38,139 | INFO     | sum of square deviations: 4024149870.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,141 | INFO     | sum of deviations: -27329540128.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,141 | INFO     | mean x: 1768157002.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,141 | INFO     | mean y: 2373182.234042553
[2026-01-11 21:55:17] 2026-01-11 20:47:38,141 | INFO     | intersect: 12010603317.749144
[2026-01-11 21:55:17] 2026-01-11 20:47:38,142 | INFO     | chi2: 1.6099834738214476
[2026-01-11 21:55:17] 2026-01-11 20:47:38,142 | INFO     | current chi2=1.6099834738214476 (change=28.777818594897465 %)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,142 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,144 | INFO     | sum of deviations: -26617440615.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,144 | INFO     | mean x: 1768156849.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,144 | INFO     | mean y: 2373614.195652174
[2026-01-11 21:55:17] 2026-01-11 20:47:38,144 | INFO     | intersect: 12477166942.38153
[2026-01-11 21:55:17] 2026-01-11 20:47:38,145 | INFO     | chi2: 1.6077638818902948
[2026-01-11 21:55:17] 2026-01-11 20:47:38,145 | INFO     | current chi2=1.6077638818902948 (change=0.13786426800297027 %)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,145 | INFO     | right removable region: 229
[2026-01-11 21:55:17] 2026-01-11 20:47:38,145 | INFO     | sum of square deviations: 4024149870.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,147 | INFO     | sum of deviations: -65414257619.00001
[2026-01-11 21:55:17] 2026-01-11 20:47:38,147 | INFO     | mean x: 1768157307.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,147 | INFO     | mean y: 2378149.1957446807
[2026-01-11 21:55:17] 2026-01-11 20:47:38,147 | INFO     | intersect: 28744522782.843616
[2026-01-11 21:55:17] 2026-01-11 20:47:38,148 | INFO     | chi2: 1.0697846687908439
[2026-01-11 21:55:17] 2026-01-11 20:47:38,148 | INFO     | current chi2=1.0697846687908439 (change=52.675043574100066 %)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,148 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | sum of deviations: -55629533983.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | mean x: 1768157459.5
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | mean y: 2372197.5782608697
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | intersect: 26074269523.288685
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | chi2: 1.04149052050882
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | current chi2=1.04149052050882 (change=2.644845183096905 %)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,150 | INFO     | left removable region: 20
[2026-01-11 21:55:17] 2026-01-11 20:47:38,151 | INFO     | sum of square deviations: 2830787960.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,152 | INFO     | sum of deviations: -16486530328.999994
[2026-01-11 21:55:17] 2026-01-11 20:47:38,152 | INFO     | mean x: 1768157429.0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,152 | INFO     | mean y: 2364974.813397129
[2026-01-11 21:55:17] 2026-01-11 20:47:38,152 | INFO     | intersect: 10300127114.389246
[2026-01-11 21:55:17] 2026-01-11 20:47:38,153 | INFO     | chi2: 0.22733375845002685
[2026-01-11 21:55:17] 2026-01-11 20:47:38,153 | INFO     | current memory leak: -5.82 B/s (using 209 data points, chi2=0.23)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | could have reported an average CPU frequency of 2598 MHz (12 samples)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | ..............................
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . Timing measurements:
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . get job = 0 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . initial setup = 1 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . payload setup = 6 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . stage-in = 0 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . payload execution = 14587 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,154 | INFO     | . stage-out = 1 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,155 | INFO     | . log creation = 0 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,155 | INFO     | ..............................
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | 
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | job summary report
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | --------------------------------------------------
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | PanDA job id: 6962917857
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | task id: 47898826
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | errors: (none)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 21:55:17] 2026-01-11 20:47:38,300 | INFO     | pilot state: finished 
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | transexitcode: 0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | exeerrorcode: 0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | exeerrordiag: 
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | exitcode: 0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | exitmsg: OK
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | cpuconsumptiontime: 56296 s
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | nevents: 400
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | neventsw: 0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | pid: 845358
[2026-01-11 21:55:17] 2026-01-11 20:47:38,301 | INFO     | pgrp: 845358
[2026-01-11 21:55:17] 2026-01-11 20:47:38,302 | INFO     | corecount: 4
[2026-01-11 21:55:17] 2026-01-11 20:47:38,302 | INFO     | event service: False
[2026-01-11 21:55:17] 2026-01-11 20:47:38,302 | INFO     | sizes: {0: 2283980, 5: 2284242, 11: 2284298, 14597: 2315205, 14599: 2324281, 14604: 2324419}
[2026-01-11 21:55:17] 2026-01-11 20:47:38,302 | INFO     | --------------------------------------------------
[2026-01-11 21:55:17] 2026-01-11 20:47:38,302 | INFO     | 
[2026-01-11 21:55:17] 2026-01-11 20:47:38,303 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 21:55:17] 2026-01-11 20:47:38,323 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,323 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,323 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,323 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,325 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,325 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 21:55:17] 2026-01-11 20:47:38,325 | INFO     | job 6962917857 has completed (purged errors)
[2026-01-11 21:55:17] 2026-01-11 20:47:38,325 | INFO     | overall cleanup function is called
[2026-01-11 21:55:17] 2026-01-11 20:47:39,333 | INFO     | --- collectZombieJob: --- 10, [845358]
[2026-01-11 21:55:17] 2026-01-11 20:47:39,333 | INFO     | zombie collector waiting for pid 845358
[2026-01-11 21:55:17] 2026-01-11 20:47:39,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 21:55:17] 2026-01-11 20:47:39,333 | INFO     | collected zombie processes
[2026-01-11 21:55:17] 2026-01-11 20:47:39,333 | INFO     | will attempt to kill all subprocesses of pid=845358
[2026-01-11 21:55:17] 2026-01-11 20:47:39,709 | INFO     | process IDs to be killed: [845358] (in reverse order)
[2026-01-11 21:55:17] 2026-01-11 20:47:39,816 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 21:55:17] 2026-01-11 20:47:39,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 21:55:17] 2026-01-11 20:47:39,827 | INFO     | did not find any defunct processes belonging to 845358
[2026-01-11 21:55:17] 2026-01-11 20:47:39,835 | INFO     | did not find any defunct processes belonging to 845358
[2026-01-11 21:55:17] 2026-01-11 20:47:39,836 | INFO     | ready for new job
[2026-01-11 21:55:17] 2026-01-11 20:47:39,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 21:55:17] 2026-01-11 20:47:39,838 | INFO     | ***************************************
[2026-01-11 21:55:17] 2026-01-11 20:47:39,838 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 21:55:17] 2026-01-11 20:47:39,838 | INFO     | ***************************************
[2026-01-11 21:55:17] 2026-01-11 20:47:39,838 | INFO     | 
[2026-01-11 21:55:17] 2026-01-11 20:47:39,840 | INFO     | architecture information:
[2026-01-11 21:55:17] 2026-01-11 20:47:39,841 | INFO     | executing command: cat /etc/os-release
[2026-01-11 21:55:17] 2026-01-11 20:47:39,852 | INFO     | cat /etc/os-release:
[2026-01-11 21:55:17] NAME="CentOS Linux"
[2026-01-11 21:55:17] VERSION="7 (Core)"
[2026-01-11 21:55:17] ID="centos"
[2026-01-11 21:55:17] ID_LIKE="rhel fedora"
[2026-01-11 21:55:17] VERSION_ID="7"
[2026-01-11 21:55:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 21:55:17] ANSI_COLOR="0;31"
[2026-01-11 21:55:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 21:55:17] HOME_URL="https://www.centos.org/"
[2026-01-11 21:55:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 21:55:17] 
[2026-01-11 21:55:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 21:55:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 21:55:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 21:55:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 21:55:17] 
[2026-01-11 21:55:17] 2026-01-11 20:47:39,852 | INFO     | ***************************************
[2026-01-11 21:55:17] 2026-01-11 20:47:40,355 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 21:55:17] 2026-01-11 20:47:40,372 | INFO     | sufficient remaining disk space (698901069824 B)
[2026-01-11 21:55:17] 2026-01-11 20:47:40,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 21:55:17] 2026-01-11 20:47:40,373 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 21:55:17] 2026-01-11 20:47:40,373 | INFO     | update_server=False
[2026-01-11 21:55:17] 2026-01-11 20:47:40,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 21:55:17] 2026-01-11 20:47:40,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:55:17] 2026-01-11 20:47:40,374 | INFO     | aborting loop
[2026-01-11 21:55:17] 2026-01-11 20:47:40,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 21:55:17] 2026-01-11 20:47:40,956 | INFO     | all payload control threads have been joined
[2026-01-11 21:55:17] 2026-01-11 20:47:41,365 | INFO     | all data control threads have been joined
[2026-01-11 21:55:17] 2026-01-11 20:47:41,379 | INFO     | [job] job monitor thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,379 | INFO     | [job] retrieve thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,443 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,850 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,881 | INFO     | [payload] validate_post thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,946 | INFO     | [data] copytool_in thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,961 | INFO     | [payload] control thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:41,962 | INFO     | all job control threads have been joined
[2026-01-11 21:55:17] 2026-01-11 20:47:42,371 | INFO     | [data] control thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,427 | INFO     | [job] validate thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,645 | INFO     | [payload] failed_post thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,682 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,736 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,877 | INFO     | [data] copytool_out thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:42,967 | INFO     | [job] control thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:43,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:55:17] 2026-01-11 20:47:43,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 21:55:17] 2026-01-11 20:47:44,269 | INFO     | [job] queue monitor thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:47:47,460 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 21:55:17] 2026-01-11 20:48:11,125 | INFO     | PID=838415 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 21:55:17] 2026-01-11 20:48:11,125 | INFO     | .. there are 2 such processes running
[2026-01-11 21:55:17] 2026-01-11 20:48:11,125 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 21:55:17] 2026-01-11 20:48:11,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 21:55:17] 2026-01-11 20:48:11,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 21:55:17] 2026-01-11 20:48:20,235 | INFO     | [monitor] cgroup control has ended
[2026-01-11 21:55:17] 2026-01-11 20:48:20,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904904365888)>', '<ExcThread(monitor, started 22904664192768)>']
[2026-01-11 21:55:17] 2026-01-11 20:48:21,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 21:55:17] 2026-01-11 20:48:21,172 | INFO     | [monitor] control thread has ended
[2026-01-11 21:55:17] 2026-01-11 20:48:25,932 | INFO     | all workflow threads have been joined
[2026-01-11 21:55:17] 2026-01-11 20:48:25,932 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 21:55:17] 2026-01-11 20:48:25,932 | INFO     | traces error code: 0
[2026-01-11 21:55:17] 2026-01-11 20:48:25,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 21:55:17] 2026-01-11 20:48:26,074 [wrapper] ==== pilot stdout END ====
[2026-01-11 21:55:17] 2026-01-11 20:48:26,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 21:55:17] 2026-01-11 20:48:26,081 [wrapper] pilotpid: 838415
[2026-01-11 21:55:17] 2026-01-11 20:48:26,084 [wrapper] Pilot exit status: 0
[2026-01-11 21:55:17] 2026-01-11 20:48:26,095 [wrapper] pandaids: 6962917857
[2026-01-11 21:55:17] 2026-01-11 20:48:26,173 [wrapper] cleanup supervisor_pilot 1008241 838416
[2026-01-11 21:55:17] 2026-01-11 20:48:26,176 [wrapper] Test setup, not cleaning
[2026-01-11 21:55:17] 2026-01-11 20:48:26,179 [wrapper] apfmon messages muted
[2026-01-11 21:55:17] 2026-01-11 20:48:26,182 [wrapper] ==== wrapper stdout END ====
[2026-01-11 21:55:17] 2026-01-11 20:48:26,185 [wrapper] ==== wrapper stderr END ====
[2026-01-11 21:55:17]  *** Error codes and diagnostics ***
[2026-01-11 21:55:17]     "exeErrorCode": 0,
[2026-01-11 21:55:17]     "exeErrorDiag": "",
[2026-01-11 21:55:17]     "pilotErrorCode": 0,
[2026-01-11 21:55:17]     "pilotErrorDiag": "",
[2026-01-11 21:55:17]  *** Listing of results directory ***
[2026-01-11 21:55:17] total 447224
[2026-01-11 21:55:17] -rwx------ 1 boinc boinc     36322 Jan  8 09:06 runpilot2-wrapper.sh
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc       100 Jan 11 17:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 21:55:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 17:43 run_atlas
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc       105 Jan 11 17:43 job.xml
[2026-01-11 21:55:17] -rw-r--r-- 2 boinc boinc 227231362 Jan 11 17:43 EVNT.47898824._000660.pool.root.1
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc      6637 Jan 11 17:43 init_data.xml
[2026-01-11 21:55:17] -rw-r--r-- 2 boinc boinc     15847 Jan 11 17:43 start_atlas.sh
[2026-01-11 21:55:17] drwxrwx--x 2 boinc boinc      4096 Jan 11 17:43 shared
[2026-01-11 21:55:17] -rw-r--r-- 2 boinc boinc    592395 Jan 11 17:43 input.tar.gz
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc         0 Jan 11 17:43 boinc_lockfile
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc      2519 Jan 11 17:43 pandaJob.out
[2026-01-11 21:55:17] -rw------- 1 boinc boinc    989556 Jan 11 17:43 agis_schedconf.cvmfs.json
[2026-01-11 21:55:17] drwx------ 5 boinc boinc      4096 Jan 11 17:43 pilot3
[2026-01-11 21:55:17] -rw------- 1 boinc boinc 221863975 Jan 11 21:46 HITS.47898826._019937.pool.root.1
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc       529 Jan 11 21:46 boinc_task_state.xml
[2026-01-11 21:55:17] -rw------- 1 boinc boinc        95 Jan 11 21:47 pilot_heartbeat.json
[2026-01-11 21:55:17] -rw------- 1 boinc boinc      1033 Jan 11 21:47 memory_monitor_summary.json
[2026-01-11 21:55:17] -rw------- 1 boinc boinc   1516240 Jan 11 21:47 agis_ddmendpoints.agis.ALL.json
[2026-01-11 21:55:17] -rw------- 1 boinc boinc    410156 Jan 11 21:47 log.47898826._019937.job.log.tgz.1
[2026-01-11 21:55:17] -rw------- 1 boinc boinc      7826 Jan 11 21:47 heartbeat.json
[2026-01-11 21:55:17] -rw------- 1 boinc boinc      4832 Jan 11 21:48 pilotlog.txt
[2026-01-11 21:55:17] -rw------- 1 boinc boinc   2060792 Jan 11 21:48 log.47898826._019937.job.log.1
[2026-01-11 21:55:17] -rw------- 1 boinc boinc       357 Jan 11 21:48 output.list
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc       620 Jan 11 21:48 runtime_log
[2026-01-11 21:55:17] -rw------- 1 boinc boinc   2488320 Jan 11 21:48 result.tar.gz
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc      9206 Jan 11 21:48 runtime_log.err
[2026-01-11 21:55:17] -rw------- 1 boinc boinc       665 Jan 11 21:48 67MMDmND0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5deKDm5bXLQm.diag
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc        26 Jan 11 21:55 wrapper_checkpoint.txt
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc      8192 Jan 11 21:55 boinc_mmap_file
[2026-01-11 21:55:17] -rw-r--r-- 1 boinc boinc     20810 Jan 11 21:55 stderr.txt
[2026-01-11 21:55:18] HITS file was successfully produced:
[2026-01-11 21:55:18] -rw------- 1 boinc boinc 221863975 Jan 11 21:46 shared/HITS.pool.root.1
[2026-01-11 21:55:18]  *** Contents of shared directory: ***
[2026-01-11 21:55:18] total 441612
[2026-01-11 21:55:18] -rw-r--r-- 2 boinc boinc 227231362 Jan 11 17:43 ATLAS.root_0
[2026-01-11 21:55:18] -rw-r--r-- 2 boinc boinc     15847 Jan 11 17:43 start_atlas.sh
[2026-01-11 21:55:18] -rw-r--r-- 2 boinc boinc    592395 Jan 11 17:43 input.tar.gz
[2026-01-11 21:55:18] -rw------- 1 boinc boinc 221863975 Jan 11 21:46 HITS.pool.root.1
[2026-01-11 21:55:18] -rw------- 1 boinc boinc   2488320 Jan 11 21:48 result.tar.gz
21:55:20 (834634): run_atlas exited; CPU time 56947.280965
21:55:20 (834634): called boinc_finish(0)

</stderr_txt>
]]>

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