Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:50:14 (622371): wrapper (7.7.26015): starting
13:50:14 (622371): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 13:50:14] Arguments: --nthreads 4
[2026-01-11 13:50:14] Threads: 4
[2026-01-11 13:50:14] Checking for CVMFS
[2026-01-11 13:50:14] No cvmfs_config command found, will try listing directly
[2026-01-11 13:50:14] CVMFS is ok
[2026-01-11 13:50:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 13:50:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 13:50:14] Further information can be found at the LHC@home message board.
[2026-01-11 13:50:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 13:50:14] Checking for apptainer binary...
[2026-01-11 13:50:14] which: no apptainer in ((null))
[2026-01-11 13:50:14] apptainer is not installed, using version from CVMFS
[2026-01-11 13:50:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 13:50:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-11 13:50:14] apptainer works
[2026-01-11 13:50:14] Set ATHENA_PROC_NUMBER=4
[2026-01-11 13:50:14] Set ATHENA_CORE_NUMBER=4
[2026-01-11 13:50:14] Starting ATLAS job with PandaID=6962917852
[2026-01-11 13:50:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 17:43:34]  *** The last 200 lines of the pilot log: ***
[2026-01-11 17:43:34] 2026-01-11 16:39:56,404 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962917852/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,405 | INFO     | extracted standard info from prmon json
[2026-01-11 17:43:34] 2026-01-11 16:39:56,405 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 17:43:34] 2026-01-11 16:39:56,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 17:43:34] 2026-01-11 16:39:56,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 17:43:34] 2026-01-11 16:39:56,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 17:43:34] 2026-01-11 16:39:56,410 | INFO     | fitting pss+swap vs Time
[2026-01-11 17:43:34] 2026-01-11 16:39:56,411 | INFO     | sum of square deviations: 3579276412.5
[2026-01-11 17:43:34] 2026-01-11 16:39:56,412 | INFO     | sum of deviations: -33109277195.999992
[2026-01-11 17:43:34] 2026-01-11 16:39:56,412 | INFO     | mean x: 1768142714.5
[2026-01-11 17:43:34] 2026-01-11 16:39:56,412 | INFO     | mean y: 2367601.4424778763
[2026-01-11 17:43:34] 2026-01-11 16:39:56,412 | INFO     | intersect: 16358167073.09571
[2026-01-11 17:43:34] 2026-01-11 16:39:56,413 | INFO     | chi2: 2.250751372138683
[2026-01-11 17:43:34] 2026-01-11 16:39:56,413 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,414 | INFO     | sum of deviations: -19361928930.999977
[2026-01-11 17:43:34] 2026-01-11 16:39:56,415 | INFO     | mean x: 1768142562.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,415 | INFO     | mean y: 2376470.7963800905
[2026-01-11 17:43:34] 2026-01-11 16:39:56,415 | INFO     | intersect: 10231055413.112583
[2026-01-11 17:43:34] 2026-01-11 16:39:56,415 | INFO     | chi2: 1.5935023320423367
[2026-01-11 17:43:34] 2026-01-11 16:39:56,415 | INFO     | current chi2=1.5935023320423367 (change=29.20131686832308 %)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,416 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,417 | INFO     | sum of deviations: -18900385454.499992
[2026-01-11 17:43:34] 2026-01-11 16:39:56,417 | INFO     | mean x: 1768142409.5
[2026-01-11 17:43:34] 2026-01-11 16:39:56,417 | INFO     | mean y: 2376787.800925926
[2026-01-11 17:43:34] 2026-01-11 16:39:56,417 | INFO     | intersect: 10696804108.429976
[2026-01-11 17:43:34] 2026-01-11 16:39:56,418 | INFO     | chi2: 1.5915084668647559
[2026-01-11 17:43:34] 2026-01-11 16:39:56,418 | INFO     | current chi2=1.5915084668647559 (change=0.1251247103620711 %)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,418 | INFO     | right removable region: 215
[2026-01-11 17:43:34] 2026-01-11 16:39:56,418 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,419 | INFO     | sum of deviations: -56572996430.99999
[2026-01-11 17:43:34] 2026-01-11 16:39:56,420 | INFO     | mean x: 1768142867.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,420 | INFO     | mean y: 2382761.1900452487
[2026-01-11 17:43:34] 2026-01-11 16:39:56,420 | INFO     | intersect: 29889235418.18773
[2026-01-11 17:43:34] 2026-01-11 16:39:56,420 | INFO     | chi2: 1.0253505426874496
[2026-01-11 17:43:34] 2026-01-11 16:39:56,420 | INFO     | current chi2=1.0253505426874496 (change=54.44407785862404 %)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,421 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,422 | INFO     | sum of deviations: -47575673483.5
[2026-01-11 17:43:34] 2026-01-11 16:39:56,422 | INFO     | mean x: 1768143019.5
[2026-01-11 17:43:34] 2026-01-11 16:39:56,422 | INFO     | mean y: 2376563.152777778
[2026-01-11 17:43:34] 2026-01-11 16:39:56,422 | INFO     | intersect: 26922185106.508904
[2026-01-11 17:43:34] 2026-01-11 16:39:56,422 | INFO     | chi2: 0.9976450689955768
[2026-01-11 17:43:34] 2026-01-11 16:39:56,423 | INFO     | current chi2=0.9976450689955768 (change=2.7020489616416072 %)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,423 | INFO     | left removable region: 20
[2026-01-11 17:43:34] 2026-01-11 16:39:56,423 | INFO     | sum of square deviations: 2299168690.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,424 | INFO     | sum of deviations: -11584591984.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,424 | INFO     | mean x: 1768142989.0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,424 | INFO     | mean y: 2368977.0512820515
[2026-01-11 17:43:34] 2026-01-11 16:39:56,424 | INFO     | intersect: 8911334720.202213
[2026-01-11 17:43:34] 2026-01-11 16:39:56,425 | INFO     | chi2: 0.1757041298519398
[2026-01-11 17:43:34] 2026-01-11 16:39:56,425 | INFO     | current memory leak: -5.04 B/s (using 195 data points, chi2=0.18)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,425 | INFO     | could have reported an average CPU frequency of 2572 MHz (11 samples)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | ..............................
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . Timing measurements:
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . get job = 0 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . initial setup = 1 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . payload setup = 6 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . stage-in = 0 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . payload execution = 13736 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . stage-out = 1 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | . log creation = 0 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,426 | INFO     | ..............................
[2026-01-11 17:43:34] 2026-01-11 16:39:56,492 | INFO     | time since job start (13772s) is within the limit (174528.0s)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | 
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | job summary report
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | --------------------------------------------------
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | PanDA job id: 6962917852
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | task id: 47898826
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | errors: (none)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | pilot state: finished 
[2026-01-11 17:43:34] 2026-01-11 16:39:56,518 | INFO     | transexitcode: 0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | exeerrorcode: 0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | exeerrordiag: 
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | exitcode: 0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | exitmsg: OK
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | cpuconsumptiontime: 52897 s
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | nevents: 400
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | neventsw: 0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | pid: 643373
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | pgrp: 643373
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | corecount: 4
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | event service: False
[2026-01-11 17:43:34] 2026-01-11 16:39:56,519 | INFO     | sizes: {0: 2283809, 1: 2284008, 5: 2284270, 11: 2284326, 13746: 2314705, 13747: 2323725, 13749: 2323909, 13756: 2324103}
[2026-01-11 17:43:34] 2026-01-11 16:39:56,520 | INFO     | --------------------------------------------------
[2026-01-11 17:43:34] 2026-01-11 16:39:56,520 | INFO     | 
[2026-01-11 17:43:34] 2026-01-11 16:39:56,520 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 17:43:34] 2026-01-11 16:39:56,540 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,540 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,540 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 17:43:34] 2026-01-11 16:39:56,542 | INFO     | job 6962917852 has completed (purged errors)
[2026-01-11 17:43:34] 2026-01-11 16:39:56,542 | INFO     | overall cleanup function is called
[2026-01-11 17:43:34] 2026-01-11 16:39:57,550 | INFO     | --- collectZombieJob: --- 10, [643373]
[2026-01-11 17:43:34] 2026-01-11 16:39:57,550 | INFO     | zombie collector waiting for pid 643373
[2026-01-11 17:43:34] 2026-01-11 16:39:57,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 17:43:34] 2026-01-11 16:39:57,550 | INFO     | collected zombie processes
[2026-01-11 17:43:34] 2026-01-11 16:39:57,550 | INFO     | will attempt to kill all subprocesses of pid=643373
[2026-01-11 17:43:34] 2026-01-11 16:39:57,893 | INFO     | process IDs to be killed: [643373] (in reverse order)
[2026-01-11 17:43:34] 2026-01-11 16:39:57,999 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 17:43:34] 2026-01-11 16:39:58,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 17:43:34] 2026-01-11 16:39:58,013 | INFO     | did not find any defunct processes belonging to 643373
[2026-01-11 17:43:34] 2026-01-11 16:39:58,025 | INFO     | did not find any defunct processes belonging to 643373
[2026-01-11 17:43:34] 2026-01-11 16:39:58,025 | INFO     | ready for new job
[2026-01-11 17:43:34] 2026-01-11 16:39:58,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 17:43:34] 2026-01-11 16:39:58,028 | INFO     | ***************************************
[2026-01-11 17:43:34] 2026-01-11 16:39:58,028 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 17:43:34] 2026-01-11 16:39:58,028 | INFO     | ***************************************
[2026-01-11 17:43:34] 2026-01-11 16:39:58,028 | INFO     | 
[2026-01-11 17:43:34] 2026-01-11 16:39:58,032 | INFO     | architecture information:
[2026-01-11 17:43:34] 2026-01-11 16:39:58,032 | INFO     | executing command: cat /etc/os-release
[2026-01-11 17:43:34] 2026-01-11 16:39:58,047 | INFO     | cat /etc/os-release:
[2026-01-11 17:43:34] NAME="CentOS Linux"
[2026-01-11 17:43:34] VERSION="7 (Core)"
[2026-01-11 17:43:34] ID="centos"
[2026-01-11 17:43:34] ID_LIKE="rhel fedora"
[2026-01-11 17:43:34] VERSION_ID="7"
[2026-01-11 17:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 17:43:34] ANSI_COLOR="0;31"
[2026-01-11 17:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 17:43:34] HOME_URL="https://www.centos.org/"
[2026-01-11 17:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 17:43:34] 
[2026-01-11 17:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 17:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 17:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 17:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 17:43:34] 
[2026-01-11 17:43:34] 2026-01-11 16:39:58,047 | INFO     | ***************************************
[2026-01-11 17:43:34] 2026-01-11 16:39:58,550 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 17:43:34] 2026-01-11 16:39:58,566 | INFO     | sufficient remaining disk space (700269461504 B)
[2026-01-11 17:43:34] 2026-01-11 16:39:58,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 17:43:34] 2026-01-11 16:39:58,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 17:43:34] 2026-01-11 16:39:58,567 | INFO     | update_server=False
[2026-01-11 17:43:34] 2026-01-11 16:39:58,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 17:43:34] 2026-01-11 16:39:58,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 17:43:34] 2026-01-11 16:39:58,815 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 17:43:34] 2026-01-11 16:39:58,815 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 17:43:34] 2026-01-11 16:39:58,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:43:34] 2026-01-11 16:39:58,815 | INFO     | will abort loop
[2026-01-11 17:43:34] 2026-01-11 16:39:59,411 | INFO     | all data control threads have been joined
[2026-01-11 17:43:34] 2026-01-11 16:39:59,426 | INFO     | all payload control threads have been joined
[2026-01-11 17:43:34] 2026-01-11 16:39:59,537 | INFO     | all job control threads have been joined
[2026-01-11 17:43:34] 2026-01-11 16:39:59,572 | INFO     | [job] retrieve thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:39:59,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:39:59,754 | INFO     | [data] copytool_in thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:39:59,821 | INFO     | [job] job monitor thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,077 | INFO     | [payload] failed_post thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 17:43:34] 2026-01-11 16:40:00,416 | INFO     | [data] control thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,431 | INFO     | [payload] control thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,543 | INFO     | [job] control thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,548 | INFO     | [job] validate thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,784 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,786 | INFO     | [data] copytool_out thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,806 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:00,963 | INFO     | [payload] validate_post thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:01,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:43:34] 2026-01-11 16:40:02,533 | INFO     | [job] queue monitor thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:04,240 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:09,202 | INFO     | job.realtimelogging is not enabled
[2026-01-11 17:43:34] 2026-01-11 16:40:10,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 17:43:34] 2026-01-11 16:40:30,043 | INFO     | PID=629586 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 17:43:34] 2026-01-11 16:40:30,043 | INFO     | .. there are 3 such processes running
[2026-01-11 17:43:34] 2026-01-11 16:40:30,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 17:43:34] 2026-01-11 16:40:30,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 17:43:34] 2026-01-11 16:40:30,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 17:43:34] 2026-01-11 16:40:46,242 | INFO     | [monitor] cgroup control has ended
[2026-01-11 17:43:34] 2026-01-11 16:40:48,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23395510949696)>', '<ExcThread(monitor, started 23395269830400)>']
[2026-01-11 17:43:34] 2026-01-11 16:40:49,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 17:43:34] 2026-01-11 16:40:49,115 | INFO     | [monitor] control thread has ended
[2026-01-11 17:43:34] 2026-01-11 16:40:53,377 | INFO     | all workflow threads have been joined
[2026-01-11 17:43:34] 2026-01-11 16:40:53,377 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 17:43:34] 2026-01-11 16:40:53,377 | INFO     | traces error code: 0
[2026-01-11 17:43:34] 2026-01-11 16:40:53,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 17:43:34] 2026-01-11 16:40:53,536 [wrapper] ==== pilot stdout END ====
[2026-01-11 17:43:34] 2026-01-11 16:40:53,539 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 17:43:34] 2026-01-11 16:40:53,542 [wrapper] pilotpid: 629586
[2026-01-11 17:43:34] 2026-01-11 16:40:53,544 [wrapper] Pilot exit status: 0
[2026-01-11 17:43:34] 2026-01-11 16:40:53,555 [wrapper] pandaids: 6962917852
[2026-01-11 17:43:34] 2026-01-11 16:40:53,631 [wrapper] cleanup supervisor_pilot  829628 629587
[2026-01-11 17:43:34] 2026-01-11 16:40:53,634 [wrapper] Test setup, not cleaning
[2026-01-11 17:43:34] 2026-01-11 16:40:53,637 [wrapper] apfmon messages muted
[2026-01-11 17:43:34] 2026-01-11 16:40:53,639 [wrapper] ==== wrapper stdout END ====
[2026-01-11 17:43:34] 2026-01-11 16:40:53,641 [wrapper] ==== wrapper stderr END ====
[2026-01-11 17:43:34]  *** Error codes and diagnostics ***
[2026-01-11 17:43:34]     "exeErrorCode": 0,
[2026-01-11 17:43:34]     "exeErrorDiag": "",
[2026-01-11 17:43:34]     "pilotErrorCode": 0,
[2026-01-11 17:43:34]     "pilotErrorDiag": "",
[2026-01-11 17:43:34]  *** Listing of results directory ***
[2026-01-11 17:43:34] total 443580
[2026-01-11 17:43:34] -rwx------ 1 boinc boinc     36322 Jan  8 09:06 runpilot2-wrapper.sh
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc       100 Jan 11 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 17:43:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 13:50 run_atlas
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc       105 Jan 11 13:50 job.xml
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc 227231362 Jan 11 13:50 EVNT.47898824._000660.pool.root.1
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc      6637 Jan 11 13:50 init_data.xml
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc     15847 Jan 11 13:50 start_atlas.sh
[2026-01-11 17:43:34] drwxrwx--x 2 boinc boinc      4096 Jan 11 13:50 shared
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc    592402 Jan 11 13:50 input.tar.gz
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc         0 Jan 11 13:50 boinc_lockfile
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc      2519 Jan 11 13:50 pandaJob.out
[2026-01-11 17:43:34] -rw------- 1 boinc boinc    989548 Jan 11 13:50 agis_schedconf.cvmfs.json
[2026-01-11 17:43:34] drwx------ 5 boinc boinc      4096 Jan 11 13:50 pilot3
[2026-01-11 17:43:34] -rw------- 1 boinc boinc 218402829 Jan 11 17:39 HITS.47898826._019932.pool.root.1
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc       529 Jan 11 17:39 boinc_task_state.xml
[2026-01-11 17:43:34] -rw------- 1 boinc boinc        95 Jan 11 17:39 pilot_heartbeat.json
[2026-01-11 17:43:34] -rw------- 1 boinc boinc      1032 Jan 11 17:39 memory_monitor_summary.json
[2026-01-11 17:43:34] -rw------- 1 boinc boinc   1516240 Jan 11 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-11 17:43:34] -rw------- 1 boinc boinc    395329 Jan 11 17:39 log.47898826._019932.job.log.tgz.1
[2026-01-11 17:43:34] -rw------- 1 boinc boinc      7821 Jan 11 17:39 heartbeat.json
[2026-01-11 17:43:34] -rw------- 1 boinc boinc      5090 Jan 11 17:40 pilotlog.txt
[2026-01-11 17:43:34] -rw------- 1 boinc boinc   1944912 Jan 11 17:40 log.47898826._019932.job.log.1
[2026-01-11 17:43:34] -rw------- 1 boinc boinc       357 Jan 11 17:40 output.list
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc       620 Jan 11 17:40 runtime_log
[2026-01-11 17:43:34] -rw------- 1 boinc boinc   2355200 Jan 11 17:40 result.tar.gz
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc      9206 Jan 11 17:40 runtime_log.err
[2026-01-11 17:43:34] -rw------- 1 boinc boinc       665 Jan 11 17:40 VgHMDmND0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2deKDmLsapom.diag
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc      8192 Jan 11 17:43 boinc_mmap_file
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc        26 Jan 11 17:43 wrapper_checkpoint.txt
[2026-01-11 17:43:34] -rw-r--r-- 1 boinc boinc     20852 Jan 11 17:43 stderr.txt
[2026-01-11 17:43:34] HITS file was successfully produced:
[2026-01-11 17:43:34] -rw------- 1 boinc boinc 218402829 Jan 11 17:39 shared/HITS.pool.root.1
[2026-01-11 17:43:34]  *** Contents of shared directory: ***
[2026-01-11 17:43:34] total 438100
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc 227231362 Jan 11 13:50 ATLAS.root_0
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc     15847 Jan 11 13:50 start_atlas.sh
[2026-01-11 17:43:34] -rw-r--r-- 2 boinc boinc    592402 Jan 11 13:50 input.tar.gz
[2026-01-11 17:43:34] -rw------- 1 boinc boinc 218402829 Jan 11 17:39 HITS.pool.root.1
[2026-01-11 17:43:34] -rw------- 1 boinc boinc   2355200 Jan 11 17:40 result.tar.gz
17:43:36 (622371): run_atlas exited; CPU time 53511.149236
17:43:36 (622371): called boinc_finish(0)

</stderr_txt>
]]>

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