Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:07 (17225): wrapper (7.7.26015): starting
17:31:07 (17225): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:31:07] Arguments: --nthreads 8
[2026-01-08 17:31:07] Threads: 8
[2026-01-08 17:31:07] Checking for CVMFS
[2026-01-08 17:31:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:31:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:31:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:31:10] 2.11.2.0 5643 34200 104832 154914 2 60 19421171 25165825 96 130560 0 7758009 99.721 8477180 3094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 17:31:10] CVMFS is ok
[2026-01-08 17:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:31:10] Checking for apptainer binary...
[2026-01-08 17:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:31:10] Running /usr/bin/apptainer --version
[2026-01-08 17:31:10] apptainer version 1.3.2-1.el7
[2026-01-08 17:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:31:24] cg-vwn380.simple-grid.lan
[2026-01-08 17:31:24] apptainer works
[2026-01-08 17:31:25] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:31:25] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:31:25] Starting ATLAS job with PandaID=6962917233
[2026-01-08 17:31:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:32:27]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:32:27] 2026-01-08 22:31:19,684 | INFO     | time since job start (21341s) is within the limit (174528.0s)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,600 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 23:32:27] 2026-01-08 22:31:20,601 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 23:32:27] 2026-01-08 22:31:20,602 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6962917233/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,603 | INFO     | extracted standard info from prmon json
[2026-01-08 23:32:27] 2026-01-08 22:31:20,603 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:32:27] 2026-01-08 22:31:20,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:32:27] 2026-01-08 22:31:20,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:32:27] 2026-01-08 22:31:20,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:32:27] 2026-01-08 22:31:20,608 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:32:27] 2026-01-08 22:31:20,608 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,611 | INFO     | sum of deviations: 138781794850.99997
[2026-01-08 23:32:27] 2026-01-08 22:31:20,611 | INFO     | mean x: 1767900988.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,611 | INFO     | mean y: 2455438.766961652
[2026-01-08 23:32:27] 2026-01-08 22:31:20,611 | INFO     | intersect: -20307861423.287457
[2026-01-08 23:32:27] 2026-01-08 22:31:20,611 | INFO     | chi2: 7.101725252771609
[2026-01-08 23:32:27] 2026-01-08 22:31:20,612 | INFO     | sum of square deviations: 11553509647.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | sum of deviations: 159112167071.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | mean x: 1767900835.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | mean y: 2461247.47005988
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | intersect: -24344645535.341015
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | chi2: 6.371848088309977
[2026-01-08 23:32:27] 2026-01-08 22:31:20,614 | INFO     | current chi2=6.371848088309977 (change=10.27746270776641 %)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,615 | INFO     | right removable region: 333
[2026-01-08 23:32:27] 2026-01-08 22:31:20,615 | INFO     | sum of square deviations: 11553509647.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,617 | INFO     | sum of deviations: 21416607699.499996
[2026-01-08 23:32:27] 2026-01-08 22:31:20,617 | INFO     | mean x: 1767901140.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,617 | INFO     | mean y: 2489402.206586826
[2026-01-08 23:32:27] 2026-01-08 22:31:20,617 | INFO     | intersect: -3274648569.957566
[2026-01-08 23:32:27] 2026-01-08 22:31:20,618 | INFO     | chi2: 2.454452575741007
[2026-01-08 23:32:27] 2026-01-08 22:31:20,618 | INFO     | current chi2=2.454452575741007 (change=65.43864359180746 %)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,618 | INFO     | sum of square deviations: 11042365180.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,620 | INFO     | sum of deviations: -40937139894.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,620 | INFO     | mean x: 1767901293.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,620 | INFO     | mean y: 2507933.790273556
[2026-01-08 23:32:27] 2026-01-08 22:31:20,621 | INFO     | intersect: 6556613088.853121
[2026-01-08 23:32:27] 2026-01-08 22:31:20,621 | INFO     | chi2: 0.93091917867215
[2026-01-08 23:32:27] 2026-01-08 22:31:20,621 | INFO     | current chi2=0.93091917867215 (change=62.072227922712976 %)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,621 | INFO     | sum of square deviations: 10546523325.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,623 | INFO     | sum of deviations: -42029659928.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,623 | INFO     | mean x: 1767901445.5
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | mean y: 2508246.5586419753
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | intersect: 7047891284.335082
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | chi2: 0.902920661595557
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | current chi2=0.902920661595557 (change=3.0076206096140115 %)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | left removable region: 30
[2026-01-08 23:32:27] 2026-01-08 22:31:20,624 | INFO     | sum of square deviations: 8625843592.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,626 | INFO     | sum of deviations: 10466783576.000002
[2026-01-08 23:32:27] 2026-01-08 22:31:20,626 | INFO     | mean x: 1767901720.0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,626 | INFO     | mean y: 2504849.1254125414
[2026-01-08 23:32:27] 2026-01-08 22:31:20,626 | INFO     | intersect: -2142705006.5274112
[2026-01-08 23:32:27] 2026-01-08 22:31:20,627 | INFO     | chi2: 0.001710049043773094
[2026-01-08 23:32:27] 2026-01-08 22:31:20,627 | INFO     | current memory leak: 1.21 B/s (using 303 data points, chi2=0.00)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,627 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | ..............................
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . Timing measurements:
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . get job = 0 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . initial setup = 9 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . payload setup = 142 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . stage-in = 0 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . payload execution = 20852 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . stage-out = 4 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | . log creation = 1 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,628 | INFO     | ..............................
[2026-01-08 23:32:27] 2026-01-08 22:31:20,712 | INFO     | 
[2026-01-08 23:32:27] 2026-01-08 22:31:20,712 | INFO     | job summary report
[2026-01-08 23:32:27] 2026-01-08 22:31:20,712 | INFO     | --------------------------------------------------
[2026-01-08 23:32:27] 2026-01-08 22:31:20,712 | INFO     | PanDA job id: 6962917233
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | task id: 47898826
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | errors: (none)
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | pilot state: finished 
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | transexitcode: 0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | exeerrorcode: 0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | exeerrordiag: 
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | exitcode: 0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | exitmsg: OK
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | cpuconsumptiontime: 78827 s
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | nevents: 400
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | neventsw: 0
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | pid: 27419
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | pgrp: 27419
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | corecount: 8
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | event service: False
[2026-01-08 23:32:27] 2026-01-08 22:31:20,713 | INFO     | sizes: {0: 2283798, 1: 2283826, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 44: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-08 23:32:27] 2026-01-08 22:31:20,714 | INFO     | --------------------------------------------------
[2026-01-08 23:32:27] 2026-01-08 22:31:20,714 | INFO     | 
[2026-01-08 23:32:27] 2026-01-08 22:31:20,714 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-08 23:32:27] 2026-01-08 22:31:21,203 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | job 6962917233 has completed (purged errors)
[2026-01-08 23:32:27] 2026-01-08 22:31:21,205 | INFO     | overall cleanup function is called
[2026-01-08 23:32:27] 2026-01-08 22:31:22,212 | INFO     | --- collectZombieJob: --- 10, [27419]
[2026-01-08 23:32:27] 2026-01-08 22:31:22,212 | INFO     | zombie collector waiting for pid 27419
[2026-01-08 23:32:27] 2026-01-08 22:31:22,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:32:27] 2026-01-08 22:31:22,212 | INFO     | collected zombie processes
[2026-01-08 23:32:27] 2026-01-08 22:31:22,212 | INFO     | will attempt to kill all subprocesses of pid=27419
[2026-01-08 23:32:27] 2026-01-08 22:31:22,263 | INFO     | process IDs to be killed: [27419] (in reverse order)
[2026-01-08 23:32:27] 2026-01-08 22:31:23,018 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:32:27] 2026-01-08 22:31:23,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:32:27] 2026-01-08 22:31:23,020 | INFO     | did not find any defunct processes belonging to 27419
[2026-01-08 23:32:27] 2026-01-08 22:31:23,021 | INFO     | did not find any defunct processes belonging to 27419
[2026-01-08 23:32:27] 2026-01-08 22:31:23,022 | INFO     | ready for new job
[2026-01-08 23:32:27] 2026-01-08 22:31:23,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:32:27] 2026-01-08 22:31:23,023 | INFO     | ***************************************
[2026-01-08 23:32:27] 2026-01-08 22:31:23,024 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:32:27] 2026-01-08 22:31:23,024 | INFO     | ***************************************
[2026-01-08 23:32:27] 2026-01-08 22:31:23,024 | INFO     | 
[2026-01-08 23:32:27] 2026-01-08 22:31:23,024 | INFO     | pilot is running in a VM
[2026-01-08 23:32:27] 2026-01-08 22:31:23,024 | INFO     | architecture information:
[2026-01-08 23:32:27] 2026-01-08 22:31:23,039 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:32:27] 2026-01-08 22:31:23,322 | INFO     | cat /etc/os-release:
[2026-01-08 23:32:27] NAME="CentOS Linux"
[2026-01-08 23:32:27] VERSION="7 (Core)"
[2026-01-08 23:32:27] ID="centos"
[2026-01-08 23:32:27] ID_LIKE="rhel fedora"
[2026-01-08 23:32:27] VERSION_ID="7"
[2026-01-08 23:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:32:27] ANSI_COLOR="0;31"
[2026-01-08 23:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:32:27] HOME_URL="https://www.centos.org/"
[2026-01-08 23:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:32:27] 
[2026-01-08 23:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:32:27] 
[2026-01-08 23:32:27] 2026-01-08 22:31:23,323 | INFO     | ***************************************
[2026-01-08 23:32:27] 2026-01-08 22:31:23,826 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-08 23:32:27] 2026-01-08 22:31:24,067 | INFO     | sufficient remaining disk space (496025731072 B)
[2026-01-08 23:32:27] 2026-01-08 22:31:24,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:32:27] 2026-01-08 22:31:24,067 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:32:27] 2026-01-08 22:31:24,067 | INFO     | update_server=False
[2026-01-08 23:32:27] 2026-01-08 22:31:24,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:32:27] 2026-01-08 22:31:24,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:32:27] 2026-01-08 22:31:24,068 | INFO     | aborting loop
[2026-01-08 23:32:27] 2026-01-08 22:31:24,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:32:27] 2026-01-08 22:31:24,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:32:27] 2026-01-08 22:31:24,188 | INFO     | all data control threads have been joined
[2026-01-08 23:32:27] 2026-01-08 22:31:25,073 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,076 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,194 | INFO     | [data] control thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,262 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,312 | INFO     | all payload control threads have been joined
[2026-01-08 23:32:27] 2026-01-08 22:31:25,479 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,668 | INFO     | [job] validate thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,688 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,719 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:25,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:32:27] 2026-01-08 22:31:25,757 | INFO     | all job control threads have been joined
[2026-01-08 23:32:27] 2026-01-08 22:31:26,081 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:26,230 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:26,271 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:26,318 | INFO     | [payload] control thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:26,739 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:26,763 | INFO     | [job] control thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:28,181 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:32:27] 2026-01-08 22:31:52,838 | INFO     | PID=20951 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:32:27] 2026-01-08 22:31:52,838 | INFO     | .. there are 2 such processes running
[2026-01-08 23:32:27] 2026-01-08 22:31:52,839 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:32:27] 2026-01-08 22:31:52,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:32:27] 2026-01-08 22:31:52,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:32:27] 2026-01-08 22:32:15,305 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:32:27] 2026-01-08 22:32:16,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212469839680)>', '<ExcThread(monitor, started 140211757512448)>']
[2026-01-08 23:32:27] 2026-01-08 22:32:16,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:32:27] 2026-01-08 22:32:16,983 | INFO     | [monitor] control thread has ended
[2026-01-08 23:32:27] 2026-01-08 22:32:21,608 | INFO     | all workflow threads have been joined
[2026-01-08 23:32:27] 2026-01-08 22:32:21,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:32:27] 2026-01-08 22:32:21,609 | INFO     | traces error code: 0
[2026-01-08 23:32:27] 2026-01-08 22:32:21,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:32:27] 2026-01-08 22:32:22,011 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:32:27] 2026-01-08 22:32:22,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:32:27] 2026-01-08 22:32:22,155 [wrapper] pilotpid: 20951
[2026-01-08 23:32:27] 2026-01-08 22:32:22,261 [wrapper] Pilot exit status: 0
[2026-01-08 23:32:27] 2026-01-08 22:32:22,747 [wrapper] pandaids: 6962917233
[2026-01-08 23:32:27] 2026-01-08 22:32:23,839 [wrapper] cleanup supervisor_pilot 26615 20952
[2026-01-08 23:32:27] 2026-01-08 22:32:23,912 [wrapper] Test setup, not cleaning
[2026-01-08 23:32:27] 2026-01-08 22:32:24,023 [wrapper] apfmon messages muted
[2026-01-08 23:32:27] 2026-01-08 22:32:24,080 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:32:27] 2026-01-08 22:32:24,154 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:32:27]  *** Error codes and diagnostics ***
[2026-01-08 23:32:27]     "exeErrorCode": 0,
[2026-01-08 23:32:27]     "exeErrorDiag": "",
[2026-01-08 23:32:27]     "pilotErrorCode": 0,
[2026-01-08 23:32:27]     "pilotErrorDiag": "",
[2026-01-08 23:32:27]  *** Listing of results directory ***
[2026-01-08 23:32:27] total 443516
[2026-01-08 23:32:27] -rwx------. 1 boinc boinc     36322 Jan  8 09:06 runpilot2-wrapper.sh
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc       100 Jan  8 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:32:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 17:31 run_atlas
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc       105 Jan  8 17:31 job.xml
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc      6390 Jan  8 17:31 init_data.xml
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc 225671415 Jan  8 17:31 EVNT.47898824._000640.pool.root.1
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:31 start_atlas.sh
[2026-01-08 23:32:27] drwxrwx--x. 2 boinc boinc        68 Jan  8 17:31 shared
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc    592402 Jan  8 17:31 input.tar.gz
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc         0 Jan  8 17:31 boinc_lockfile
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc      2519 Jan  8 17:31 pandaJob.out
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc    989837 Jan  8 17:35 agis_schedconf.cvmfs.json
[2026-01-08 23:32:27] drwx------. 5 boinc boinc      4096 Jan  8 17:35 pilot3
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc 217848633 Jan  8 23:27 HITS.47898826._019433.pool.root.1
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc       531 Jan  8 23:28 boinc_task_state.xml
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc      1016 Jan  8 23:29 memory_monitor_summary.json
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc   1516240 Jan  8 23:29 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc    539790 Jan  8 23:29 log.47898826._019433.job.log.tgz.1
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc      7779 Jan  8 23:31 heartbeat.json
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc        95 Jan  8 23:31 pilot_heartbeat.json
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc        28 Jan  8 23:32 wrapper_checkpoint.txt
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:32 boinc_mmap_file
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc      4884 Jan  8 23:32 pilotlog.txt
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc   2832629 Jan  8 23:32 log.47898826._019433.job.log.1
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc       357 Jan  8 23:32 output.list
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:32 runtime_log
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc   3389440 Jan  8 23:32 result.tar.gz
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc      8817 Jan  8 23:32 runtime_log.err
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc       657 Jan  8 23:32 2sdMDmBD0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHceKDmCFZm1n.diag
[2026-01-08 23:32:27] -rw-r--r--. 1 boinc boinc     20705 Jan  8 23:32 stderr.txt
[2026-01-08 23:32:27] HITS file was successfully produced:
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc 217848633 Jan  8 23:27 shared/HITS.pool.root.1
[2026-01-08 23:32:27]  *** Contents of shared directory: ***
[2026-01-08 23:32:27] total 437036
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc 225671415 Jan  8 17:31 ATLAS.root_0
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:31 start_atlas.sh
[2026-01-08 23:32:27] -rw-r--r--. 2 boinc boinc    592402 Jan  8 17:31 input.tar.gz
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc 217848633 Jan  8 23:27 HITS.pool.root.1
[2026-01-08 23:32:27] -rw-------. 1 boinc boinc   3389440 Jan  8 23:32 result.tar.gz
23:32:29 (17225): run_atlas exited; CPU time 79045.739835
23:32:29 (17225): called boinc_finish(0)

</stderr_txt>
]]>

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