Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:24:52 (3199891): wrapper (7.7.26015): starting
21:24:52 (3199891): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 21:24:52] Arguments: --nthreads 4
[2026-01-12 21:24:52] Threads: 4
[2026-01-12 21:24:52] Checking for CVMFS
[2026-01-12 21:24:52] No cvmfs_config command found, will try listing directly
[2026-01-12 21:24:52] CVMFS is ok
[2026-01-12 21:24:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 21:24:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 21:24:52] Further information can be found at the LHC@home message board.
[2026-01-12 21:24:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:24:52] Checking for apptainer binary...
[2026-01-12 21:24:52] which: no apptainer in ((null))
[2026-01-12 21:24:52] apptainer is not installed, using version from CVMFS
[2026-01-12 21:24:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:24:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-12 21:24:53] apptainer works
[2026-01-12 21:24:53] Set ATHENA_PROC_NUMBER=4
[2026-01-12 21:24:53] Set ATHENA_CORE_NUMBER=4
[2026-01-12 21:24:53] Starting ATLAS job with PandaID=6962916909
[2026-01-12 21:24:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:24:24]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:24:24] 2026-01-12 23:12:13,587 | INFO     | PID=3203720 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 00:24:24] 2026-01-12 23:12:14,588 | INFO     | time since job start (10033s) is within the limit (174528.0s)
[2026-01-13 00:24:24] 2026-01-12 23:12:15,136 | INFO     | monitor loop #736: job 0:6962916909 is in state 'finished'
[2026-01-13 00:24:24] 2026-01-12 23:12:15,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:24:24] 2026-01-12 23:12:16,590 | INFO     | time since job start (10035s) is within the limit (174528.0s)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,639 | INFO     | monitor loop #737: job 0:6962916909 is in state 'finished'
[2026-01-13 00:24:24] 2026-01-12 23:12:17,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,817 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 00:24:24] 2026-01-12 23:12:17,825 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2864.7454218750004
[2026-01-13 00:24:24] 2026-01-12 23:12:17,832 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6962916909/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,833 | INFO     | extracted standard info from prmon json
[2026-01-13 00:24:24] 2026-01-12 23:12:17,833 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:24:24] 2026-01-12 23:12:17,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:24:24] 2026-01-12 23:12:17,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 00:24:24] 2026-01-12 23:12:17,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 00:24:24] 2026-01-12 23:12:17,835 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:24:24] 2026-01-12 23:12:17,835 | INFO     | sum of square deviations: 1367709365.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | sum of deviations: -47811299312.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | mean x: 1768254496.5
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | mean y: 2481940.524390244
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | intersect: 61815720304.912834
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | chi2: 1.5975542548048152
[2026-01-13 00:24:24] 2026-01-12 23:12:17,836 | INFO     | sum of square deviations: 1246386160.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | sum of deviations: -45466167549.00001
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | mean x: 1768254344.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | mean y: 2484887.0314465407
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | intersect: 64505566559.20847
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | chi2: 1.5870871656996663
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | current chi2=1.5870871656996663 (change=0.6551945934648498 %)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | right removable region: 158
[2026-01-13 00:24:24] 2026-01-12 23:12:17,837 | INFO     | sum of square deviations: 1246386160.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | sum of deviations: -64592297624.99999
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | mean x: 1768254649.0
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | mean y: 2502561.566037736
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | intersect: 91639937435.68074
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | chi2: 0.3505550343928137
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | current chi2=0.3505550343928137 (change=78.05676812925245 %)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,838 | INFO     | sum of square deviations: 1132458442.5
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | sum of deviations: -58617657993.00001
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | mean x: 1768254801.5
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | mean y: 2494555.883116883
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | intersect: 91529875437.06465
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | chi2: 0.35038220941448345
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | current chi2=0.35038220941448345 (change=0.0493003840693976 %)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | left removable region: 20
[2026-01-13 00:24:24] 2026-01-12 23:12:17,839 | INFO     | sum of square deviations: 814878534.5
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | sum of deviations: -42508909509.00001
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | mean x: 1768254923.5
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | mean y: 2477738.202898551
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | intersect: 92245168335.06169
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | chi2: 0.32496852121188174
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | current memory leak: -52.17 B/s (using 138 data points, chi2=0.32)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | could have reported an average CPU frequency of 2828 MHz (9 samples)
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | ..............................
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | . Timing measurements:
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | . get job = 0 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | . initial setup = 1 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | . payload setup = 4 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,840 | INFO     | . stage-in = 0 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,841 | INFO     | . payload execution = 10004 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,841 | INFO     | . stage-out = 0 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,841 | INFO     | . log creation = 0 s
[2026-01-13 00:24:24] 2026-01-12 23:12:17,841 | INFO     | ..............................
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | 
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | job summary report
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | --------------------------------------------------
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | PanDA job id: 6962916909
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | task id: 47898826
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | errors: (none)
[2026-01-13 00:24:24] 2026-01-12 23:12:18,021 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | pilot state: finished 
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | transexitcode: 0
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | exeerrorcode: 0
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | exeerrordiag: 
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | exitcode: 0
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | exitmsg: OK
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | cpuconsumptiontime: 38742 s
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | nevents: 400
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | neventsw: 0
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | pid: 3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | pgrp: 3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | corecount: 4
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | event service: False
[2026-01-13 00:24:24] 2026-01-12 23:12:18,022 | INFO     | sizes: {0: 2283980, 4: 2284242, 11: 2284270, 10012: 2312951, 10013: 2322026, 10016: 2322026, 10022: 2322412}
[2026-01-13 00:24:24] 2026-01-12 23:12:18,023 | INFO     | --------------------------------------------------
[2026-01-13 00:24:24] 2026-01-12 23:12:18,023 | INFO     | 
[2026-01-13 00:24:24] 2026-01-12 23:12:18,023 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:24:24] 2026-01-12 23:12:18,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,040 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:24:24] 2026-01-12 23:12:18,040 | INFO     | job 6962916909 has completed (purged errors)
[2026-01-13 00:24:24] 2026-01-12 23:12:18,040 | INFO     | overall cleanup function is called
[2026-01-13 00:24:24] 2026-01-12 23:12:19,048 | INFO     | --- collectZombieJob: --- 10, [3211423]
[2026-01-13 00:24:24] 2026-01-12 23:12:19,048 | INFO     | zombie collector waiting for pid 3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:19,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:24:24] 2026-01-12 23:12:19,048 | INFO     | collected zombie processes
[2026-01-13 00:24:24] 2026-01-12 23:12:19,048 | INFO     | will attempt to kill all subprocesses of pid=3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:19,277 | INFO     | process IDs to be killed: [3211423] (in reverse order)
[2026-01-13 00:24:24] 2026-01-12 23:12:19,347 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:24:24] 2026-01-12 23:12:19,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:24:24] 2026-01-12 23:12:19,360 | INFO     | did not find any defunct processes belonging to 3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:19,371 | INFO     | did not find any defunct processes belonging to 3211423
[2026-01-13 00:24:24] 2026-01-12 23:12:19,372 | INFO     | ready for new job
[2026-01-13 00:24:24] 2026-01-12 23:12:19,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:24:24] 2026-01-12 23:12:19,374 | INFO     | ***************************************
[2026-01-13 00:24:24] 2026-01-12 23:12:19,374 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:24:24] 2026-01-12 23:12:19,375 | INFO     | ***************************************
[2026-01-13 00:24:24] 2026-01-12 23:12:19,375 | INFO     | 
[2026-01-13 00:24:24] 2026-01-12 23:12:19,380 | INFO     | architecture information:
[2026-01-13 00:24:24] 2026-01-12 23:12:19,380 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:24:24] 2026-01-12 23:12:19,395 | INFO     | cat /etc/os-release:
[2026-01-13 00:24:24] NAME="CentOS Linux"
[2026-01-13 00:24:24] VERSION="7 (Core)"
[2026-01-13 00:24:24] ID="centos"
[2026-01-13 00:24:24] ID_LIKE="rhel fedora"
[2026-01-13 00:24:24] VERSION_ID="7"
[2026-01-13 00:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:24:24] ANSI_COLOR="0;31"
[2026-01-13 00:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:24:24] HOME_URL="https://www.centos.org/"
[2026-01-13 00:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:24:24] 
[2026-01-13 00:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:24:24] 
[2026-01-13 00:24:24] 2026-01-12 23:12:19,396 | INFO     | ***************************************
[2026-01-13 00:24:24] 2026-01-12 23:12:19,899 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-01-13 00:24:24] 2026-01-12 23:12:19,913 | INFO     | sufficient remaining disk space (710365151232 B)
[2026-01-13 00:24:24] 2026-01-12 23:12:19,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:24:24] 2026-01-12 23:12:19,914 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:24:24] 2026-01-12 23:12:19,914 | INFO     | update_server=False
[2026-01-13 00:24:24] 2026-01-12 23:12:19,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:24:24] 2026-01-12 23:12:19,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:24:24] 2026-01-12 23:12:20,074 | INFO     | all data control threads have been joined
[2026-01-13 00:24:24] 2026-01-12 23:12:20,143 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 00:24:24] 2026-01-12 23:12:20,143 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 00:24:24] 2026-01-12 23:12:20,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:24:24] 2026-01-12 23:12:20,143 | INFO     | will abort loop
[2026-01-13 00:24:24] 2026-01-12 23:12:20,274 | INFO     | all payload control threads have been joined
[2026-01-13 00:24:24] 2026-01-12 23:12:20,892 | INFO     | all job control threads have been joined
[2026-01-13 00:24:24] 2026-01-12 23:12:20,916 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:20,970 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,079 | INFO     | [data] control thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,149 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,280 | INFO     | [payload] control thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,382 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,594 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,898 | INFO     | [job] control thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:21,920 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:22,097 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:22,317 | INFO     | [job] validate thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:22,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:24:24] 2026-01-12 23:12:22,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:22,404 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:22,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:24:24] 2026-01-12 23:12:23,907 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:26,325 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:29,973 | INFO     | job.realtimelogging is not enabled
[2026-01-13 00:24:24] 2026-01-12 23:12:30,978 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:24:24] 2026-01-12 23:12:49,966 | INFO     | PID=3203720 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 00:24:24] 2026-01-12 23:12:49,967 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:24:24] 2026-01-12 23:12:49,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:24:24] 2026-01-12 23:12:49,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:24:24] 2026-01-12 23:13:15,323 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:24:24] 2026-01-12 23:13:17,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23258759157568)>', '<ExcThread(monitor, started 23258174822144)>']
[2026-01-13 00:24:24] 2026-01-12 23:13:18,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:24:24] 2026-01-12 23:13:18,095 | INFO     | [monitor] control thread has ended
[2026-01-13 00:24:24] 2026-01-12 23:13:22,328 | INFO     | all workflow threads have been joined
[2026-01-13 00:24:24] 2026-01-12 23:13:22,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:24:24] 2026-01-12 23:13:22,328 | INFO     | traces error code: 0
[2026-01-13 00:24:24] 2026-01-12 23:13:22,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:24:24] 2026-01-12 23:13:22,547 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:24:24] 2026-01-12 23:13:22,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:24:24] 2026-01-12 23:13:22,551 [wrapper] pilotpid: 3203720
[2026-01-13 00:24:24] 2026-01-12 23:13:22,553 [wrapper] Pilot exit status: 0
[2026-01-13 00:24:24] 2026-01-12 23:13:22,562 [wrapper] pandaids: 6962916909
[2026-01-13 00:24:24] 2026-01-12 23:13:22,644 [wrapper] cleanup supervisor_pilot 3293508 3203721
[2026-01-13 00:24:24] 2026-01-12 23:13:22,647 [wrapper] Test setup, not cleaning
[2026-01-13 00:24:24] 2026-01-12 23:13:22,650 [wrapper] apfmon messages muted
[2026-01-13 00:24:24] 2026-01-12 23:13:22,653 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:24:24] 2026-01-12 23:13:22,655 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:24:24]  *** Error codes and diagnostics ***
[2026-01-13 00:24:24]     "exeErrorCode": 0,
[2026-01-13 00:24:24]     "exeErrorDiag": "",
[2026-01-13 00:24:24]     "pilotErrorCode": 0,
[2026-01-13 00:24:24]     "pilotErrorDiag": "",
[2026-01-13 00:24:24]  *** Listing of results directory ***
[2026-01-13 00:24:24] total 444440
[2026-01-13 00:24:24] -rwx------ 1 boinc boinc     36322 Jan  8 09:05 runpilot2-wrapper.sh
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:09 queuedata.json
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc       100 Jan 12 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:24:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 21:24 run_atlas
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc       105 Jan 12 21:24 job.xml
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc      6637 Jan 12 21:24 init_data.xml
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc 224744326 Jan 12 21:24 EVNT.47898824._000631.pool.root.1
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:24 start_atlas.sh
[2026-01-13 00:24:24] drwxrwx--x 2 boinc boinc      4096 Jan 12 21:24 shared
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc    592398 Jan 12 21:24 input.tar.gz
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc         0 Jan 12 21:24 boinc_lockfile
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc      2519 Jan 12 21:24 pandaJob.out
[2026-01-13 00:24:24] -rw------- 1 boinc boinc    988547 Jan 12 21:25 agis_schedconf.cvmfs.json
[2026-01-13 00:24:24] -rw------- 1 boinc boinc   1516240 Jan 12 21:25 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:24:24] drwx------ 5 boinc boinc      4096 Jan 12 21:25 pilot3
[2026-01-13 00:24:24] -rw------- 1 boinc boinc 222966405 Jan 13 00:11 HITS.47898826._019209.pool.root.1
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc       528 Jan 13 00:11 boinc_task_state.xml
[2026-01-13 00:24:24] -rw------- 1 boinc boinc      1027 Jan 13 00:12 memory_monitor_summary.json
[2026-01-13 00:24:24] -rw------- 1 boinc boinc    338838 Jan 13 00:12 log.47898826._019209.job.log.tgz.1
[2026-01-13 00:24:24] -rw------- 1 boinc boinc      7824 Jan 13 00:12 heartbeat.json
[2026-01-13 00:24:24] -rw------- 1 boinc boinc        95 Jan 13 00:12 pilot_heartbeat.json
[2026-01-13 00:24:24] -rw------- 1 boinc boinc      5016 Jan 13 00:13 pilotlog.txt
[2026-01-13 00:24:24] -rw------- 1 boinc boinc   1399958 Jan 13 00:13 log.47898826._019209.job.log.1
[2026-01-13 00:24:24] -rw------- 1 boinc boinc       357 Jan 13 00:13 output.list
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc       620 Jan 13 00:13 runtime_log
[2026-01-13 00:24:24] -rw------- 1 boinc boinc   1761280 Jan 13 00:13 result.tar.gz
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc      9206 Jan 13 00:13 runtime_log.err
[2026-01-13 00:24:24] -rw------- 1 boinc boinc       665 Jan 13 00:13 bbMODmzC0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtbeKDmFUopUm.diag
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc        26 Jan 13 00:24 wrapper_checkpoint.txt
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc      8192 Jan 13 00:24 boinc_mmap_file
[2026-01-13 00:24:24] -rw-r--r-- 1 boinc boinc     21194 Jan 13 00:24 stderr.txt
[2026-01-13 00:24:24] HITS file was successfully produced:
[2026-01-13 00:24:24] -rw------- 1 boinc boinc 222966405 Jan 13 00:11 shared/HITS.pool.root.1
[2026-01-13 00:24:24]  *** Contents of shared directory: ***
[2026-01-13 00:24:24] total 439548
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc 224744326 Jan 12 21:24 ATLAS.root_0
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:24 start_atlas.sh
[2026-01-13 00:24:24] -rw-r--r-- 2 boinc boinc    592398 Jan 12 21:24 input.tar.gz
[2026-01-13 00:24:24] -rw------- 1 boinc boinc 222966405 Jan 13 00:11 HITS.pool.root.1
[2026-01-13 00:24:24] -rw------- 1 boinc boinc   1761280 Jan 13 00:13 result.tar.gz
00:24:26 (3199891): run_atlas exited; CPU time 39145.100827
00:24:26 (3199891): called boinc_finish(0)

</stderr_txt>
]]>

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