Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
02:51:52 (2658719): wrapper (7.7.26015): starting
02:51:52 (2658719): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 02:51:52] Arguments: --nthreads 12
[2026-01-09 02:51:52] Threads: 12
[2026-01-09 02:51:52] Checking for CVMFS
[2026-01-09 02:51:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:51:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:51:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:51:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:51:52] 2.12.7.0 2330541 1495 57276 154926 1 57 2919062 4096001 0 130560 0 875396 99.916 60667 45 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 02:51:52] CVMFS is ok
[2026-01-09 02:51:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:51:52] Checking for apptainer binary...
[2026-01-09 02:51:52] apptainer is not installed, using version from CVMFS
[2026-01-09 02:51:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:51:52] lithium
[2026-01-09 02:51:52] apptainer works
[2026-01-09 02:51:52] Set ATHENA_PROC_NUMBER=12
[2026-01-09 02:51:52] Set ATHENA_CORE_NUMBER=12
[2026-01-09 02:51:52] Starting ATLAS job with PandaID=6962914685
[2026-01-09 02:51:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:09:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:09:22] 2026-01-09 04:08:16,519 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2427.9816250000003
[2026-01-09 05:09:22] 2026-01-09 04:08:16,521 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6962914685/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,521 | INFO     | extracted standard info from prmon json
[2026-01-09 05:09:22] 2026-01-09 04:08:16,522 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:09:22] 2026-01-09 04:08:16,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:09:22] 2026-01-09 04:08:16,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:09:22] 2026-01-09 04:08:16,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:09:22] 2026-01-09 04:08:16,524 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:09:22] 2026-01-09 04:08:16,524 | INFO     | sum of square deviations: 729472282.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,525 | INFO     | sum of deviations: -13756720854.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,525 | INFO     | mean x: 1767927572.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,525 | INFO     | mean y: 2718874.962406015
[2026-01-09 05:09:22] 2026-01-09 04:08:16,525 | INFO     | intersect: 33343103010.48188
[2026-01-09 05:09:22] 2026-01-09 04:08:16,525 | INFO     | chi2: 2.210109360549
[2026-01-09 05:09:22] 2026-01-09 04:08:16,526 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,526 | INFO     | sum of deviations: -4130085276.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,526 | INFO     | mean x: 1767927419.5
[2026-01-09 05:09:22] 2026-01-09 04:08:16,526 | INFO     | mean y: 2736878.5
[2026-01-09 05:09:22] 2026-01-09 04:08:16,527 | INFO     | intersect: 11231750935.116398
[2026-01-09 05:09:22] 2026-01-09 04:08:16,527 | INFO     | chi2: 1.5227585392272456
[2026-01-09 05:09:22] 2026-01-09 04:08:16,527 | INFO     | current chi2=1.5227585392272456 (change=31.10030813819158 %)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,527 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | sum of deviations: -3697417888.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | mean x: 1767927267.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | mean y: 2737779.5691056913
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | intersect: 11331902226.851635
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | chi2: 1.522610053418616
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | current chi2=1.522610053418616 (change=0.00975110661372064 %)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,528 | INFO     | right removable region: 122
[2026-01-09 05:09:22] 2026-01-09 04:08:16,529 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,529 | INFO     | sum of deviations: -32748509532.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,529 | INFO     | mean x: 1767927724.5
[2026-01-09 05:09:22] 2026-01-09 04:08:16,529 | INFO     | mean y: 2754733.71875
[2026-01-09 05:09:22] 2026-01-09 04:08:16,529 | INFO     | intersect: 89040513698.59021
[2026-01-09 05:09:22] 2026-01-09 04:08:16,530 | INFO     | chi2: 0.9033086902997248
[2026-01-09 05:09:22] 2026-01-09 04:08:16,530 | INFO     | current chi2=0.9033086902997248 (change=59.12832611706873 %)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,530 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,530 | INFO     | sum of deviations: -27175669702.000015
[2026-01-09 05:09:22] 2026-01-09 04:08:16,530 | INFO     | mean x: 1767927877.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | mean y: 2743106.9024390243
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | intersect: 83271052660.80211
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | chi2: 0.8926649061496403
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | current chi2=0.8926649061496403 (change=1.178310832651549 %)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | left removable region: 20
[2026-01-09 05:09:22] 2026-01-09 04:08:16,531 | INFO     | sum of square deviations: 329031285.5
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | sum of deviations: -5399528643.0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | mean x: 1767927846.5
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | mean y: 2733681.588235294
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | intersect: 29015102616.1346
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | chi2: 0.09067906505420509
[2026-01-09 05:09:22] 2026-01-09 04:08:16,532 | INFO     | current memory leak: -16.41 B/s (using 102 data points, chi2=0.09)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | could have reported an average CPU frequency of 2648 MHz (8 samples)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | ..............................
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . Timing measurements:
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . get job = 0 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . initial setup = 4 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . payload setup = 4 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . stage-in = 0 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . payload execution = 8070 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . stage-out = 0 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,533 | INFO     | . log creation = 0 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,534 | INFO     | ..............................
[2026-01-09 05:09:22] 2026-01-09 04:08:16,573 | INFO     | time since job start (8172s) is within the limit (174528.0s)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,607 | INFO     | 
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | job summary report
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | --------------------------------------------------
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | PanDA job id: 6962914685
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | task id: 47898826
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | errors: (none)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | pilot state: finished 
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | transexitcode: 0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,608 | INFO     | exeerrorcode: 0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | exeerrordiag: 
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | exitcode: 0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | exitmsg: OK
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | cpuconsumptiontime: 91745 s
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | nevents: 400
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | neventsw: 0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | pid: 2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | pgrp: 2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | corecount: 12
[2026-01-09 05:09:22] 2026-01-09 04:08:16,609 | INFO     | event service: False
[2026-01-09 05:09:22] 2026-01-09 04:08:16,610 | INFO     | sizes: {0: 2283975, 3: 2284237, 11: 2284265, 8079: 2312107, 8080: 2321175, 8159: 2321313}
[2026-01-09 05:09:22] 2026-01-09 04:08:16,610 | INFO     | --------------------------------------------------
[2026-01-09 05:09:22] 2026-01-09 04:08:16,610 | INFO     | 
[2026-01-09 05:09:22] 2026-01-09 04:08:16,610 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-09 05:09:22] 2026-01-09 04:08:16,625 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:09:22] 2026-01-09 04:08:16,627 | INFO     | job 6962914685 has completed (purged errors)
[2026-01-09 05:09:22] 2026-01-09 04:08:16,628 | INFO     | overall cleanup function is called
[2026-01-09 05:09:22] 2026-01-09 04:08:17,633 | INFO     | --- collectZombieJob: --- 10, [2669152]
[2026-01-09 05:09:22] 2026-01-09 04:08:17,633 | INFO     | zombie collector waiting for pid 2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:17,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:09:22] 2026-01-09 04:08:17,633 | INFO     | collected zombie processes
[2026-01-09 05:09:22] 2026-01-09 04:08:17,633 | INFO     | will attempt to kill all subprocesses of pid=2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:17,713 | INFO     | process IDs to be killed: [2669152] (in reverse order)
[2026-01-09 05:09:22] 2026-01-09 04:08:17,753 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:09:22] 2026-01-09 04:08:17,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:09:22] 2026-01-09 04:08:17,756 | INFO     | did not find any defunct processes belonging to 2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:17,758 | INFO     | did not find any defunct processes belonging to 2669152
[2026-01-09 05:09:22] 2026-01-09 04:08:17,759 | INFO     | ready for new job
[2026-01-09 05:09:22] 2026-01-09 04:08:17,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:09:22] 2026-01-09 04:08:17,760 | INFO     | ***************************************
[2026-01-09 05:09:22] 2026-01-09 04:08:17,760 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:09:22] 2026-01-09 04:08:17,760 | INFO     | ***************************************
[2026-01-09 05:09:22] 2026-01-09 04:08:17,760 | INFO     | 
[2026-01-09 05:09:22] 2026-01-09 04:08:17,782 | INFO     | architecture information:
[2026-01-09 05:09:22] 2026-01-09 04:08:17,783 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:09:22] 2026-01-09 04:08:17,793 | INFO     | cat /etc/os-release:
[2026-01-09 05:09:22] NAME="CentOS Linux"
[2026-01-09 05:09:22] VERSION="7 (Core)"
[2026-01-09 05:09:22] ID="centos"
[2026-01-09 05:09:22] ID_LIKE="rhel fedora"
[2026-01-09 05:09:22] VERSION_ID="7"
[2026-01-09 05:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:09:22] ANSI_COLOR="0;31"
[2026-01-09 05:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:09:22] HOME_URL="https://www.centos.org/"
[2026-01-09 05:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:09:22] 
[2026-01-09 05:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:09:22] 
[2026-01-09 05:09:22] 2026-01-09 04:08:17,793 | INFO     | ***************************************
[2026-01-09 05:09:22] 2026-01-09 04:08:18,296 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-09 05:09:22] 2026-01-09 04:08:18,309 | INFO     | sufficient remaining disk space (35329671168 B)
[2026-01-09 05:09:22] 2026-01-09 04:08:18,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:09:22] 2026-01-09 04:08:18,310 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:09:22] 2026-01-09 04:08:18,310 | INFO     | update_server=False
[2026-01-09 05:09:22] 2026-01-09 04:08:18,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:09:22] 2026-01-09 04:08:18,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:09:22] 2026-01-09 04:08:18,310 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 05:09:22] 2026-01-09 04:08:18,311 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:09:22] 2026-01-09 04:08:18,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:09:22] 2026-01-09 04:08:18,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:09:22] 2026-01-09 04:08:18,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:09:22] 2026-01-09 04:08:18,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:09:22] 2026-01-09 04:08:18,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:09:22] 2026-01-09 04:08:18,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:09:22] 2026-01-09 04:08:18,636 | INFO     | will abort loop
[2026-01-09 05:09:22] 2026-01-09 04:08:19,081 | INFO     | all job control threads have been joined
[2026-01-09 05:09:22] 2026-01-09 04:08:19,257 | INFO     | all data control threads have been joined
[2026-01-09 05:09:22] 2026-01-09 04:08:19,313 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:19,315 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:19,422 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:19,624 | INFO     | all payload control threads have been joined
[2026-01-09 05:09:22] 2026-01-09 04:08:19,641 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,086 | INFO     | [job] control thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,089 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,090 | INFO     | [job] validate thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,261 | INFO     | [data] control thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,261 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,445 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,459 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,493 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,513 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:20,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:09:22] 2026-01-09 04:08:20,630 | INFO     | [payload] control thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:24,531 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:08:29,177 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:09:22] 2026-01-09 04:08:30,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:09:22] 2026-01-09 04:09:16,917 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:09:22] 2026-01-09 04:09:17,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209641686848)>', '<ExcThread(monitor, started 140209056372480)>']
[2026-01-09 05:09:22] 2026-01-09 04:09:18,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:09:22] 2026-01-09 04:09:18,601 | INFO     | [monitor] control thread has ended
[2026-01-09 05:09:22] 2026-01-09 04:09:22,653 | INFO     | all workflow threads have been joined
[2026-01-09 05:09:22] 2026-01-09 04:09:22,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:09:22] 2026-01-09 04:09:22,653 | INFO     | traces error code: 0
[2026-01-09 05:09:22] 2026-01-09 04:09:22,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:09:22] 2026-01-09 04:09:22,737 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:09:22] 2026-01-09 04:09:22,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:09:22] 2026-01-09 04:09:22,742 [wrapper] pilotpid: 2662553
[2026-01-09 05:09:22] 2026-01-09 04:09:22,744 [wrapper] Pilot exit status: 0
[2026-01-09 05:09:22] 2026-01-09 04:09:22,754 [wrapper] pandaids: 6962914685
[2026-01-09 05:09:22] 2026-01-09 04:09:22,778 [wrapper] cleanup supervisor_pilot 2686007 2662554
[2026-01-09 05:09:22] 2026-01-09 04:09:22,780 [wrapper] Test setup, not cleaning
[2026-01-09 05:09:22] 2026-01-09 04:09:22,783 [wrapper] apfmon messages muted
[2026-01-09 05:09:22] 2026-01-09 04:09:22,785 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:09:22] 2026-01-09 04:09:22,787 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:09:22]  *** Error codes and diagnostics ***
[2026-01-09 05:09:22]     "exeErrorCode": 0,
[2026-01-09 05:09:22]     "exeErrorDiag": "",
[2026-01-09 05:09:22]     "pilotErrorCode": 0,
[2026-01-09 05:09:22]     "pilotErrorDiag": "",
[2026-01-09 05:09:22]  *** Listing of results directory ***
[2026-01-09 05:09:22] total 436236
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc      5112 Jan  8 08:57 queuedata.json
[2026-01-09 05:09:22] -rwx------ 1 boinc boinc     36322 Jan  8 08:57 runpilot2-wrapper.sh
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc       100 Jan  9 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:09:22] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 02:51 run_atlas
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc       105 Jan  9 02:51 job.xml
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 02:51 start_atlas.sh
[2026-01-09 05:09:22] drwxrwx--x 2 boinc boinc      4096 Jan  9 02:51 shared
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc    592399 Jan  9 02:51 input.tar.gz
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc      6045 Jan  9 02:51 init_data.xml
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc 225917887 Jan  9 02:51 EVNT.47898824._000382.pool.root.1
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc         0 Jan  9 02:51 boinc_lockfile
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc      2518 Jan  9 02:51 pandaJob.out
[2026-01-09 05:09:22] -rw------- 1 boinc boinc    989821 Jan  9 02:52 agis_schedconf.cvmfs.json
[2026-01-09 05:09:22] -rw------- 1 boinc boinc   1516240 Jan  9 02:52 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:09:22] drwx------ 5 boinc boinc      4096 Jan  9 02:52 pilot3
[2026-01-09 05:09:22] -rw------- 1 boinc boinc 213678357 Jan  9 05:06 HITS.47898826._017745.pool.root.1
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc       530 Jan  9 05:06 boinc_task_state.xml
[2026-01-09 05:09:22] -rw------- 1 boinc boinc      1069 Jan  9 05:06 memory_monitor_summary.json
[2026-01-09 05:09:22] -rw------- 1 boinc boinc    450793 Jan  9 05:06 log.47898826._017745.job.log.tgz.1
[2026-01-09 05:09:22] -rw------- 1 boinc boinc        95 Jan  9 05:08 pilot_heartbeat.json
[2026-01-09 05:09:22] -rw------- 1 boinc boinc      7837 Jan  9 05:08 heartbeat.json
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc        27 Jan  9 05:09 wrapper_checkpoint.txt
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc      8192 Jan  9 05:09 boinc_mmap_file
[2026-01-09 05:09:22] -rw------- 1 boinc boinc      4817 Jan  9 05:09 pilotlog.txt
[2026-01-09 05:09:22] -rw------- 1 boinc boinc   1146113 Jan  9 05:09 log.47898826._017745.job.log.1
[2026-01-09 05:09:22] -rw------- 1 boinc boinc       357 Jan  9 05:09 output.list
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc       620 Jan  9 05:09 runtime_log
[2026-01-09 05:09:22] -rw------- 1 boinc boinc   1617920 Jan  9 05:09 result.tar.gz
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc      8888 Jan  9 05:09 runtime_log.err
[2026-01-09 05:09:22] -rw------- 1 boinc boinc       653 Jan  9 05:09 GLKODmA5zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuBeKDmwjfTNn.diag
[2026-01-09 05:09:22] -rw-r--r-- 1 boinc boinc     20690 Jan  9 05:09 stderr.txt
[2026-01-09 05:09:22] HITS file was successfully produced:
[2026-01-09 05:09:22] -rw------- 1 boinc boinc 213678357 Jan  9 05:06 shared/HITS.pool.root.1
[2026-01-09 05:09:22]  *** Contents of shared directory: ***
[2026-01-09 05:09:22] total 431480
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 02:51 start_atlas.sh
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc    592399 Jan  9 02:51 input.tar.gz
[2026-01-09 05:09:22] -rw-r--r-- 2 boinc boinc 225917887 Jan  9 02:51 ATLAS.root_0
[2026-01-09 05:09:22] -rw------- 1 boinc boinc 213678357 Jan  9 05:06 HITS.pool.root.1
[2026-01-09 05:09:22] -rw------- 1 boinc boinc   1617920 Jan  9 05:09 result.tar.gz
05:09:24 (2658719): run_atlas exited; CPU time 91457.072907
05:09:24 (2658719): called boinc_finish(0)

</stderr_txt>
]]>

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