Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:48 (31508): wrapper (7.7.26015): starting
11:32:48 (31508): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:32:48] Arguments: --nthreads 8
[2026-01-08 11:32:48] Threads: 8
[2026-01-08 11:32:48] Checking for CVMFS
[2026-01-08 11:32:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:32:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:32:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:32:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:32:54] 2.11.2.0 24663 33862 93724 154901 3 11 16802863 25165824 96 130560 0 15459068 99.806 11149274 2821 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 11:32:54] CVMFS is ok
[2026-01-08 11:32:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:32:54] Checking for apptainer binary...
[2026-01-08 11:32:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:32:54] Running /usr/bin/apptainer --version
[2026-01-08 11:32:54] apptainer version 1.3.2-1.el7
[2026-01-08 11:32:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:33:14] cg-vwn475.simple-grid.lan
[2026-01-08 11:33:14] apptainer works
[2026-01-08 11:33:14] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:33:14] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:33:15] Starting ATLAS job with PandaID=6962918828
[2026-01-08 11:33:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:23:58]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:23:58] 2026-01-08 16:22:47,418 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 17:23:58] 2026-01-08 16:22:47,420 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6962918828/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,420 | INFO     | extracted standard info from prmon json
[2026-01-08 17:23:58] 2026-01-08 16:22:47,420 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:23:58] 2026-01-08 16:22:47,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:23:58] 2026-01-08 16:22:47,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:23:58] 2026-01-08 16:22:47,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:23:58] 2026-01-08 16:22:47,427 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:23:58] 2026-01-08 16:22:47,428 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,431 | INFO     | sum of deviations: 211896789429.50003
[2026-01-08 17:23:58] 2026-01-08 16:22:47,432 | INFO     | mean x: 1767879220.5
[2026-01-08 17:23:58] 2026-01-08 16:22:47,432 | INFO     | mean y: 2424597.076219512
[2026-01-08 17:23:58] 2026-01-08 16:22:47,432 | INFO     | intersect: -34233420239.52298
[2026-01-08 17:23:58] 2026-01-08 16:22:47,432 | INFO     | chi2: 7.748023847227769
[2026-01-08 17:23:58] 2026-01-08 16:22:47,433 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,436 | INFO     | sum of deviations: 230002482500.00003
[2026-01-08 17:23:58] 2026-01-08 16:22:47,437 | INFO     | mean x: 1767879068.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,437 | INFO     | mean y: 2430116.5634674923
[2026-01-08 17:23:58] 2026-01-08 16:22:47,437 | INFO     | intersect: -38911334631.34924
[2026-01-08 17:23:58] 2026-01-08 16:22:47,437 | INFO     | chi2: 7.015350822021054
[2026-01-08 17:23:58] 2026-01-08 16:22:47,437 | INFO     | current chi2=7.015350822021054 (change=9.456256713366523 %)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,438 | INFO     | right removable region: 322
[2026-01-08 17:23:58] 2026-01-08 16:22:47,438 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,441 | INFO     | sum of deviations: 97722161528.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,441 | INFO     | mean x: 1767879373.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,442 | INFO     | mean y: 2459912.06501548
[2026-01-08 17:23:58] 2026-01-08 16:22:47,442 | INFO     | intersect: -16531004505.729595
[2026-01-08 17:23:58] 2026-01-08 16:22:47,442 | INFO     | chi2: 2.9271595576136646
[2026-01-08 17:23:58] 2026-01-08 16:22:47,442 | INFO     | current chi2=2.9271595576136646 (change=62.22056597488405 %)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,443 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 17:23:58] 2026-01-08 16:22:47,446 | INFO     | sum of deviations: 24329492052.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,446 | INFO     | mean x: 1767879525.5
[2026-01-08 17:23:58] 2026-01-08 16:22:47,446 | INFO     | mean y: 2483283.7232704405
[2026-01-08 17:23:58] 2026-01-08 16:22:47,447 | INFO     | intersect: -4311020851.896016
[2026-01-08 17:23:58] 2026-01-08 16:22:47,447 | INFO     | chi2: 0.9477169319515367
[2026-01-08 17:23:58] 2026-01-08 16:22:47,447 | INFO     | current chi2=0.9477169319515367 (change=67.62332516222133 %)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,448 | INFO     | sum of square deviations: 9508390372.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,451 | INFO     | sum of deviations: 5834755591.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,451 | INFO     | mean x: 1767879678.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,451 | INFO     | mean y: 2489360.392971246
[2026-01-08 17:23:58] 2026-01-08 16:22:47,451 | INFO     | intersect: -1082357330.9883046
[2026-01-08 17:23:58] 2026-01-08 16:22:47,452 | INFO     | chi2: 0.8290632239121832
[2026-01-08 17:23:58] 2026-01-08 16:22:47,452 | INFO     | current chi2=0.8290632239121832 (change=12.519952323213431 %)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,452 | INFO     | left removable region: 30
[2026-01-08 17:23:58] 2026-01-08 16:22:47,452 | INFO     | sum of square deviations: 7720081493.0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,455 | INFO     | sum of deviations: 12271165009.500002
[2026-01-08 17:23:58] 2026-01-08 16:22:47,455 | INFO     | mean x: 1767879952.5
[2026-01-08 17:23:58] 2026-01-08 16:22:47,456 | INFO     | mean y: 2501099.1883561644
[2026-01-08 17:23:58] 2026-01-08 16:22:47,456 | INFO     | intersect: -2807565949.169228
[2026-01-08 17:23:58] 2026-01-08 16:22:47,456 | INFO     | chi2: 0.0008826516011292867
[2026-01-08 17:23:58] 2026-01-08 16:22:47,456 | INFO     | current memory leak: 1.59 B/s (using 292 data points, chi2=0.00)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,457 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,457 | INFO     | ..............................
[2026-01-08 17:23:58] 2026-01-08 16:22:47,457 | INFO     | . Timing measurements:
[2026-01-08 17:23:58] 2026-01-08 16:22:47,457 | INFO     | . get job = 0 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . initial setup = 13 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . payload setup = 158 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . stage-in = 0 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . payload execution = 20166 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . stage-out = 4 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | . log creation = 1 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,458 | INFO     | ..............................
[2026-01-08 17:23:58] 2026-01-08 16:22:47,568 | INFO     | 
[2026-01-08 17:23:58] 2026-01-08 16:22:47,568 | INFO     | job summary report
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | --------------------------------------------------
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | PanDA job id: 6962918828
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | task id: 47898826
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | errors: (none)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | pilot state: finished 
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | transexitcode: 0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | exeerrorcode: 0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,569 | INFO     | exeerrordiag: 
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | exitcode: 0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | exitmsg: OK
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | cpuconsumptiontime: 75199 s
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | nevents: 400
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | neventsw: 0
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | pid: 9664
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | pgrp: 9664
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | corecount: 8
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | event service: False
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | sizes: {0: 2283141, 1: 2283827, 2: 2284026, 13: 2284026, 24: 2284082, 34: 2284110, 45: 2284266, 56: 2284294, 67: 2284322, 77: 2284350, 88: 2284406, 99: 2284714, 10
[2026-01-08 17:23:58] 2026-01-08 16:22:47,570 | INFO     | --------------------------------------------------
[2026-01-08 17:23:58] 2026-01-08 16:22:47,571 | INFO     | 
[2026-01-08 17:23:58] 2026-01-08 16:22:47,571 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-08 17:23:58] 2026-01-08 16:22:47,778 | INFO     | time since job start (20676s) is within the limit (174528.0s)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | job 6962918828 has completed (purged errors)
[2026-01-08 17:23:58] 2026-01-08 16:22:47,802 | INFO     | overall cleanup function is called
[2026-01-08 17:23:58] 2026-01-08 16:22:48,811 | INFO     | --- collectZombieJob: --- 10, [9664]
[2026-01-08 17:23:58] 2026-01-08 16:22:48,812 | INFO     | zombie collector waiting for pid 9664
[2026-01-08 17:23:58] 2026-01-08 16:22:48,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:23:58] 2026-01-08 16:22:48,812 | INFO     | collected zombie processes
[2026-01-08 17:23:58] 2026-01-08 16:22:48,812 | INFO     | will attempt to kill all subprocesses of pid=9664
[2026-01-08 17:23:58] 2026-01-08 16:22:48,891 | INFO     | process IDs to be killed: [9664] (in reverse order)
[2026-01-08 17:23:58] 2026-01-08 16:22:49,780 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:23:58] 2026-01-08 16:22:49,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:23:58] 2026-01-08 16:22:49,782 | INFO     | did not find any defunct processes belonging to 9664
[2026-01-08 17:23:58] 2026-01-08 16:22:49,784 | INFO     | did not find any defunct processes belonging to 9664
[2026-01-08 17:23:58] 2026-01-08 16:22:49,784 | INFO     | ready for new job
[2026-01-08 17:23:58] 2026-01-08 16:22:49,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:23:58] 2026-01-08 16:22:49,796 | INFO     | ***************************************
[2026-01-08 17:23:58] 2026-01-08 16:22:49,796 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:23:58] 2026-01-08 16:22:49,796 | INFO     | ***************************************
[2026-01-08 17:23:58] 2026-01-08 16:22:49,796 | INFO     | 
[2026-01-08 17:23:58] 2026-01-08 16:22:49,797 | INFO     | pilot is running in a VM
[2026-01-08 17:23:58] 2026-01-08 16:22:49,797 | INFO     | architecture information:
[2026-01-08 17:23:58] 2026-01-08 16:22:49,814 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:23:58] 2026-01-08 16:22:50,061 | INFO     | cat /etc/os-release:
[2026-01-08 17:23:58] NAME="CentOS Linux"
[2026-01-08 17:23:58] VERSION="7 (Core)"
[2026-01-08 17:23:58] ID="centos"
[2026-01-08 17:23:58] ID_LIKE="rhel fedora"
[2026-01-08 17:23:58] VERSION_ID="7"
[2026-01-08 17:23:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:23:58] ANSI_COLOR="0;31"
[2026-01-08 17:23:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:23:58] HOME_URL="https://www.centos.org/"
[2026-01-08 17:23:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:23:58] 
[2026-01-08 17:23:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:23:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:23:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:23:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:23:58] 
[2026-01-08 17:23:58] 2026-01-08 16:22:50,061 | INFO     | ***************************************
[2026-01-08 17:23:58] 2026-01-08 16:22:50,565 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-08 17:23:58] 2026-01-08 16:22:50,848 | INFO     | sufficient remaining disk space (496273195008 B)
[2026-01-08 17:23:58] 2026-01-08 16:22:50,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:23:58] 2026-01-08 16:22:50,848 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:23:58] 2026-01-08 16:22:50,849 | INFO     | update_server=False
[2026-01-08 17:23:58] 2026-01-08 16:22:50,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:23:58] 2026-01-08 16:22:50,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:23:58] 2026-01-08 16:22:50,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:23:58] 2026-01-08 16:22:51,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:23:58] 2026-01-08 16:22:51,017 | INFO     | aborting loop
[2026-01-08 17:23:58] 2026-01-08 16:22:51,135 | INFO     | all job control threads have been joined
[2026-01-08 17:23:58] 2026-01-08 16:22:51,256 | INFO     | all data control threads have been joined
[2026-01-08 17:23:58] 2026-01-08 16:22:51,854 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:51,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,022 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,141 | INFO     | [job] control thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,170 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,231 | INFO     | all payload control threads have been joined
[2026-01-08 17:23:58] 2026-01-08 16:22:52,262 | INFO     | [data] control thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,284 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:23:58] 2026-01-08 16:22:52,801 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,859 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,861 | INFO     | [job] validate thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:52,896 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:53,175 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:53,237 | INFO     | [payload] control thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:53,270 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:53,588 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:22:54,858 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:23:58] 2026-01-08 16:23:09,128 [wrapper] supervise_pilot (15 min periods counter: 24)
[2026-01-08 17:23:58] 2026-01-08 16:23:20,908 | INFO     | PID=3187 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 17:23:58] 2026-01-08 16:23:20,908 | INFO     | .. there are 2 such processes running
[2026-01-08 17:23:58] 2026-01-08 16:23:20,908 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:23:58] 2026-01-08 16:23:20,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:23:58] 2026-01-08 16:23:20,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:23:58] 2026-01-08 16:23:46,036 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:23:58] 2026-01-08 16:23:47,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919635920704)>', '<ExcThread(monitor, started 139919196403456)>']
[2026-01-08 17:23:58] 2026-01-08 16:23:48,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:23:58] 2026-01-08 16:23:48,070 | INFO     | [monitor] control thread has ended
[2026-01-08 17:23:58] 2026-01-08 16:23:53,020 | INFO     | all workflow threads have been joined
[2026-01-08 17:23:58] 2026-01-08 16:23:53,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:23:58] 2026-01-08 16:23:53,021 | INFO     | traces error code: 0
[2026-01-08 17:23:58] 2026-01-08 16:23:53,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:23:58] 2026-01-08 16:23:53,385 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:23:58] 2026-01-08 16:23:53,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:23:58] 2026-01-08 16:23:53,598 [wrapper] pilotpid: 3187
[2026-01-08 17:23:58] 2026-01-08 16:23:53,699 [wrapper] Pilot exit status: 0
[2026-01-08 17:23:58] 2026-01-08 16:23:54,230 [wrapper] pandaids: 6962918828
[2026-01-08 17:23:58] 2026-01-08 16:23:55,330 [wrapper] cleanup supervisor_pilot 11168 3188
[2026-01-08 17:23:58] 2026-01-08 16:23:55,416 [wrapper] Test setup, not cleaning
[2026-01-08 17:23:58] 2026-01-08 16:23:55,504 [wrapper] apfmon messages muted
[2026-01-08 17:23:58] 2026-01-08 16:23:55,523 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:23:58] 2026-01-08 16:23:55,533 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:23:58]  *** Error codes and diagnostics ***
[2026-01-08 17:23:58]     "exeErrorCode": 0,
[2026-01-08 17:23:58]     "exeErrorDiag": "",
[2026-01-08 17:23:58]     "pilotErrorCode": 0,
[2026-01-08 17:23:58]     "pilotErrorDiag": "",
[2026-01-08 17:23:58]  *** Listing of results directory ***
[2026-01-08 17:23:58] total 438132
[2026-01-08 17:23:58] -rwx------. 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc       100 Jan  8 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:23:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 11:32 run_atlas
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc       105 Jan  8 11:32 job.xml
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc 223775780 Jan  8 11:32 EVNT.47898824._000327.pool.root.1
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc    592399 Jan  8 11:32 input.tar.gz
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc      6390 Jan  8 11:32 init_data.xml
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:32 start_atlas.sh
[2026-01-08 17:23:58] drwxrwx--x. 2 boinc boinc        68 Jan  8 11:32 shared
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc         0 Jan  8 11:32 boinc_lockfile
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc      2519 Jan  8 11:33 pandaJob.out
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc    989835 Jan  8 11:38 agis_schedconf.cvmfs.json
[2026-01-08 17:23:58] drwx------. 5 boinc boinc      4096 Jan  8 11:38 pilot3
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc 214339442 Jan  8 17:19 HITS.47898826._020848.pool.root.1
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc       531 Jan  8 17:19 boinc_task_state.xml
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc      1013 Jan  8 17:20 memory_monitor_summary.json
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc   1516240 Jan  8 17:20 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc    554934 Jan  8 17:20 log.47898826._020848.job.log.tgz.1
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc        95 Jan  8 17:22 pilot_heartbeat.json
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc      7780 Jan  8 17:22 heartbeat.json
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc        28 Jan  8 17:23 wrapper_checkpoint.txt
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc      4884 Jan  8 17:23 pilotlog.txt
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc   2762586 Jan  8 17:23 log.47898826._020848.job.log.1
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc       357 Jan  8 17:23 output.list
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc       620 Jan  8 17:23 runtime_log
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc   3338240 Jan  8 17:23 result.tar.gz
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc      8833 Jan  8 17:23 runtime_log.err
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc       657 Jan  8 17:23 iQwKDmmB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhZeKDmRYrjhm.diag
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc      8192 Jan  8 17:23 boinc_mmap_file
[2026-01-08 17:23:58] -rw-r--r--. 1 boinc boinc     20772 Jan  8 17:23 stderr.txt
[2026-01-08 17:23:58] HITS file was successfully produced:
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc 214339442 Jan  8 17:19 shared/HITS.pool.root.1
[2026-01-08 17:23:58]  *** Contents of shared directory: ***
[2026-01-08 17:23:58] total 431704
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc 223775780 Jan  8 11:32 ATLAS.root_0
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc    592399 Jan  8 11:32 input.tar.gz
[2026-01-08 17:23:58] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:32 start_atlas.sh
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc 214339442 Jan  8 17:19 HITS.pool.root.1
[2026-01-08 17:23:58] -rw-------. 1 boinc boinc   3338240 Jan  8 17:23 result.tar.gz
17:23:59 (31508): run_atlas exited; CPU time 75394.481170
17:23:59 (31508): called boinc_finish(0)

</stderr_txt>
]]>

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