Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:06:13 (11474): wrapper (7.7.26015): starting
21:06:13 (11474): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:06:13] Arguments: --nthreads 8
[2026-01-08 21:06:13] Threads: 8
[2026-01-08 21:06:13] Checking for CVMFS
[2026-01-08 21:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:06:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:06:17] 2.11.2.0 3545 34431 93680 154918 2 60 21426687 25165825 96 130560 0 17234302 99.834 8613005 2713 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 21:06:17] CVMFS is ok
[2026-01-08 21:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:06:17] Checking for apptainer binary...
[2026-01-08 21:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:06:17] Running /usr/bin/apptainer --version
[2026-01-08 21:06:17] apptainer version 1.3.2-1.el7
[2026-01-08 21:06:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:06:43] cg-vwn466.simple-grid.lan
[2026-01-08 21:06:43] apptainer works
[2026-01-08 21:06:43] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:06:43] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:06:43] Starting ATLAS job with PandaID=6962918812
[2026-01-08 21:06:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:50:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:50:28] 2026-01-09 01:49:36,369 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:50:28] 2026-01-09 01:49:36,370 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,372 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6962918812/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,373 | INFO     | extracted standard info from prmon json
[2026-01-09 02:50:28] 2026-01-09 01:49:36,373 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:50:28] 2026-01-09 01:49:36,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:50:28] 2026-01-09 01:49:36,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:50:28] 2026-01-09 01:49:36,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:50:28] 2026-01-09 01:49:36,380 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:50:28] 2026-01-09 01:49:36,381 | INFO     | sum of square deviations: 10449170802.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,384 | INFO     | sum of deviations: 104030740353.00002
[2026-01-09 02:50:28] 2026-01-09 01:49:36,384 | INFO     | mean x: 1767913414.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,385 | INFO     | mean y: 2469907.7275541797
[2026-01-09 02:50:28] 2026-01-09 01:49:36,385 | INFO     | intersect: -17598672309.53025
[2026-01-09 02:50:28] 2026-01-09 01:49:36,385 | INFO     | chi2: 8.711846369702217
[2026-01-09 02:50:28] 2026-01-09 01:49:36,386 | INFO     | sum of square deviations: 9971385099.5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,389 | INFO     | sum of deviations: 123869412679.50002
[2026-01-09 02:50:28] 2026-01-09 01:49:36,389 | INFO     | mean x: 1767913261.5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,390 | INFO     | mean y: 2476153.8584905663
[2026-01-09 02:50:28] 2026-01-09 01:49:36,390 | INFO     | intersect: -21959405288.39824
[2026-01-09 02:50:28] 2026-01-09 01:49:36,390 | INFO     | chi2: 8.00323521668293
[2026-01-09 02:50:28] 2026-01-09 01:49:36,390 | INFO     | current chi2=8.00323521668293 (change=8.133880270015696 %)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,390 | INFO     | right removable region: 317
[2026-01-09 02:50:28] 2026-01-09 01:49:36,391 | INFO     | sum of square deviations: 9971385099.5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,394 | INFO     | sum of deviations: -10587644309.499983
[2026-01-09 02:50:28] 2026-01-09 01:49:36,394 | INFO     | mean x: 1767913566.5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,395 | INFO     | mean y: 2506474.544025157
[2026-01-09 02:50:28] 2026-01-09 01:49:36,395 | INFO     | intersect: 1879681994.8215573
[2026-01-09 02:50:28] 2026-01-09 01:49:36,395 | INFO     | chi2: 3.711844276219262
[2026-01-09 02:50:28] 2026-01-09 01:49:36,395 | INFO     | current chi2=3.711844276219262 (change=57.393138966176025 %)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,396 | INFO     | sum of square deviations: 9508390372.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,399 | INFO     | sum of deviations: -93423581747.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,399 | INFO     | mean x: 1767913719.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,399 | INFO     | mean y: 2533719.124600639
[2026-01-09 02:50:28] 2026-01-09 01:49:36,400 | INFO     | intersect: 17372963979.856358
[2026-01-09 02:50:28] 2026-01-09 01:49:36,400 | INFO     | chi2: 1.1709201415569623
[2026-01-09 02:50:28] 2026-01-09 01:49:36,400 | INFO     | current chi2=1.1709201415569623 (change=68.45449177222447 %)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,401 | INFO     | sum of square deviations: 9059954057.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,404 | INFO     | sum of deviations: -102759421236.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,404 | INFO     | mean x: 1767913871.5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,404 | INFO     | mean y: 2536860.837662338
[2026-01-09 02:50:28] 2026-01-09 01:49:36,404 | INFO     | intersect: 20054493536.05638
[2026-01-09 02:50:28] 2026-01-09 01:49:36,405 | INFO     | chi2: 1.07195648285502
[2026-01-09 02:50:28] 2026-01-09 01:49:36,405 | INFO     | current chi2=1.07195648285502 (change=8.451785496690759 %)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,405 | INFO     | left removable region: 30
[2026-01-09 02:50:28] 2026-01-09 01:49:36,405 | INFO     | sum of square deviations: 7330250928.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,408 | INFO     | sum of deviations: -52404078250.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,408 | INFO     | mean x: 1767914146.0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,408 | INFO     | mean y: 2533976.226480836
[2026-01-09 02:50:28] 2026-01-09 01:49:36,409 | INFO     | intersect: 12641379788.772713
[2026-01-09 02:50:28] 2026-01-09 01:49:36,409 | INFO     | chi2: 0.24415899578716416
[2026-01-09 02:50:28] 2026-01-09 01:49:36,409 | INFO     | current memory leak: -7.15 B/s (using 287 data points, chi2=0.24)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,410 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,410 | INFO     | ..............................
[2026-01-09 02:50:28] 2026-01-09 01:49:36,410 | INFO     | . Timing measurements:
[2026-01-09 02:50:28] 2026-01-09 01:49:36,410 | INFO     | . get job = 0 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,410 | INFO     | . initial setup = 11 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | . payload setup = 151 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | . stage-in = 0 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | . payload execution = 19855 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | . stage-out = 3 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | . log creation = 1 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,411 | INFO     | ..............................
[2026-01-09 02:50:28] 2026-01-09 01:49:36,575 | INFO     | 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | job summary report
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | --------------------------------------------------
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | PanDA job id: 6962918812
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | task id: 47898826
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | errors: (none)
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | pilot state: finished 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | transexitcode: 0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | exeerrorcode: 0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,576 | INFO     | exeerrordiag: 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | exitcode: 0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | exitmsg: OK
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | cpuconsumptiontime: 74651 s
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | nevents: 400
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | neventsw: 0
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | pid: 21673
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | pgrp: 21673
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | corecount: 8
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | event service: False
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 44: 2284081, 55: 2284237, 66: 2284265, 76: 2284293, 87: 2284349, 98: 2284377, 104: 2284947, 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,577 | INFO     | --------------------------------------------------
[2026-01-09 02:50:28] 2026-01-09 01:49:36,578 | INFO     | 
[2026-01-09 02:50:28] 2026-01-09 01:49:36,578 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-09 02:50:28] 2026-01-09 01:49:36,680 | INFO     | time since job start (20334s) is within the limit (174528.0s)
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | job 6962918812 has completed (purged errors)
[2026-01-09 02:50:28] 2026-01-09 01:49:37,156 | INFO     | overall cleanup function is called
[2026-01-09 02:50:28] 2026-01-09 01:49:38,165 | INFO     | --- collectZombieJob: --- 10, [21673]
[2026-01-09 02:50:28] 2026-01-09 01:49:38,165 | INFO     | zombie collector waiting for pid 21673
[2026-01-09 02:50:28] 2026-01-09 01:49:38,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:50:28] 2026-01-09 01:49:38,166 | INFO     | collected zombie processes
[2026-01-09 02:50:28] 2026-01-09 01:49:38,166 | INFO     | will attempt to kill all subprocesses of pid=21673
[2026-01-09 02:50:28] 2026-01-09 01:49:38,253 | INFO     | process IDs to be killed: [21673] (in reverse order)
[2026-01-09 02:50:28] 2026-01-09 01:49:38,920 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:50:28] 2026-01-09 01:49:38,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:50:28] 2026-01-09 01:49:38,922 | INFO     | did not find any defunct processes belonging to 21673
[2026-01-09 02:50:28] 2026-01-09 01:49:38,924 | INFO     | did not find any defunct processes belonging to 21673
[2026-01-09 02:50:28] 2026-01-09 01:49:38,924 | INFO     | ready for new job
[2026-01-09 02:50:28] 2026-01-09 01:49:38,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:50:28] 2026-01-09 01:49:38,926 | INFO     | ***************************************
[2026-01-09 02:50:28] 2026-01-09 01:49:38,926 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:50:28] 2026-01-09 01:49:38,927 | INFO     | ***************************************
[2026-01-09 02:50:28] 2026-01-09 01:49:38,927 | INFO     | 
[2026-01-09 02:50:28] 2026-01-09 01:49:38,927 | INFO     | pilot is running in a VM
[2026-01-09 02:50:28] 2026-01-09 01:49:38,927 | INFO     | architecture information:
[2026-01-09 02:50:28] 2026-01-09 01:49:38,933 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:50:28] 2026-01-09 01:49:39,069 | INFO     | cat /etc/os-release:
[2026-01-09 02:50:28] NAME="CentOS Linux"
[2026-01-09 02:50:28] VERSION="7 (Core)"
[2026-01-09 02:50:28] ID="centos"
[2026-01-09 02:50:28] ID_LIKE="rhel fedora"
[2026-01-09 02:50:28] VERSION_ID="7"
[2026-01-09 02:50:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:50:28] ANSI_COLOR="0;31"
[2026-01-09 02:50:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:50:28] HOME_URL="https://www.centos.org/"
[2026-01-09 02:50:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:50:28] 
[2026-01-09 02:50:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:50:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:50:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:50:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:50:28] 
[2026-01-09 02:50:28] 2026-01-09 01:49:39,069 | INFO     | ***************************************
[2026-01-09 02:50:28] 2026-01-09 01:49:39,573 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-09 02:50:28] 2026-01-09 01:49:39,668 | INFO     | sufficient remaining disk space (496760782848 B)
[2026-01-09 02:50:28] 2026-01-09 01:49:39,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:50:28] 2026-01-09 01:49:39,668 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:50:28] 2026-01-09 01:49:39,668 | INFO     | update_server=False
[2026-01-09 02:50:28] 2026-01-09 01:49:39,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:50:28] 2026-01-09 01:49:39,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:50:28] 2026-01-09 01:49:40,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:50:28] 2026-01-09 01:49:40,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:50:28] 2026-01-09 01:49:40,589 | INFO     | aborting loop
[2026-01-09 02:50:28] 2026-01-09 01:49:40,673 | INFO     | all data control threads have been joined
[2026-01-09 02:50:28] 2026-01-09 01:49:40,674 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:40,685 | INFO     | all job control threads have been joined
[2026-01-09 02:50:28] 2026-01-09 01:49:40,742 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:40,781 | INFO     | all payload control threads have been joined
[2026-01-09 02:50:28] 2026-01-09 01:49:40,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:40,929 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,175 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:50:28] 2026-01-09 01:49:41,594 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,676 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,679 | INFO     | [data] control thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,691 | INFO     | [job] control thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,787 | INFO     | [payload] control thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,825 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:41,832 | INFO     | [job] validate thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:42,001 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:42,055 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:42,593 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:49:44,546 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:50:28] 2026-01-09 01:50:09,788 | INFO     | PID=15220 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:50:28] 2026-01-09 01:50:09,788 | INFO     | .. there are 2 such processes running
[2026-01-09 02:50:28] 2026-01-09 01:50:09,789 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:50:28] 2026-01-09 01:50:09,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:50:28] 2026-01-09 01:50:09,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:50:28] 2026-01-09 01:50:17,283 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:50:28] 2026-01-09 01:50:18,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794468828992)>', '<ExcThread(monitor, started 139793602180864)>']
[2026-01-09 02:50:28] 2026-01-09 01:50:18,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:50:28] 2026-01-09 01:50:18,844 | INFO     | [monitor] control thread has ended
[2026-01-09 02:50:28] 2026-01-09 01:50:23,776 | INFO     | all workflow threads have been joined
[2026-01-09 02:50:28] 2026-01-09 01:50:23,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:50:28] 2026-01-09 01:50:23,777 | INFO     | traces error code: 0
[2026-01-09 02:50:28] 2026-01-09 01:50:23,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:50:28] 2026-01-09 01:50:24,088 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:50:28] 2026-01-09 01:50:24,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:50:28] 2026-01-09 01:50:24,256 [wrapper] pilotpid: 15220
[2026-01-09 02:50:28] 2026-01-09 01:50:24,344 [wrapper] Pilot exit status: 0
[2026-01-09 02:50:28] 2026-01-09 01:50:24,851 [wrapper] pandaids: 6962918812
[2026-01-09 02:50:28] 2026-01-09 01:50:25,663 [wrapper] cleanup supervisor_pilot 19402 15221
[2026-01-09 02:50:28] 2026-01-09 01:50:25,746 [wrapper] Test setup, not cleaning
[2026-01-09 02:50:28] 2026-01-09 01:50:25,809 [wrapper] apfmon messages muted
[2026-01-09 02:50:28] 2026-01-09 01:50:25,866 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:50:28] 2026-01-09 01:50:25,948 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:50:28]  *** Error codes and diagnostics ***
[2026-01-09 02:50:28]     "exeErrorCode": 0,
[2026-01-09 02:50:28]     "exeErrorDiag": "",
[2026-01-09 02:50:28]     "pilotErrorCode": 0,
[2026-01-09 02:50:28]     "pilotErrorDiag": "",
[2026-01-09 02:50:28]  *** Listing of results directory ***
[2026-01-09 02:50:28] total 447260
[2026-01-09 02:50:28] -rwx------. 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:50:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:06 run_atlas
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:06 job.xml
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc      6391 Jan  8 21:06 init_data.xml
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc 223775780 Jan  8 21:06 EVNT.47898824._000327.pool.root.1
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:06 start_atlas.sh
[2026-01-09 02:50:28] drwxrwx--x. 2 boinc boinc        68 Jan  8 21:06 shared
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc    592396 Jan  8 21:06 input.tar.gz
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:06 boinc_lockfile
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc      2519 Jan  8 21:06 pandaJob.out
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc    989845 Jan  8 21:10 agis_schedconf.cvmfs.json
[2026-01-09 02:50:28] drwx------. 5 boinc boinc      4096 Jan  8 21:10 pilot3
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc 223860801 Jan  9 02:46 HITS.47898826._020832.pool.root.1
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc       531 Jan  9 02:46 boinc_task_state.xml
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc      1016 Jan  9 02:47 memory_monitor_summary.json
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc   1516240 Jan  9 02:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc    528791 Jan  9 02:47 log.47898826._020832.job.log.tgz.1
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc        95 Jan  9 02:49 pilot_heartbeat.json
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc      7776 Jan  9 02:49 heartbeat.json
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc      8192 Jan  9 02:50 boinc_mmap_file
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc        28 Jan  9 02:50 wrapper_checkpoint.txt
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc      4884 Jan  9 02:50 pilotlog.txt
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc   2700319 Jan  9 02:50 log.47898826._020832.job.log.1
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc       357 Jan  9 02:50 output.list
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc       620 Jan  9 02:50 runtime_log
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc   3246080 Jan  9 02:50 result.tar.gz
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc      8817 Jan  9 02:50 runtime_log.err
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc       657 Jan  9 02:50 nXeKDmmB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXZeKDmFHqign.diag
[2026-01-09 02:50:28] -rw-r--r--. 1 boinc boinc     20700 Jan  9 02:50 stderr.txt
[2026-01-09 02:50:28] HITS file was successfully produced:
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc 223860801 Jan  9 02:46 shared/HITS.pool.root.1
[2026-01-09 02:50:28]  *** Contents of shared directory: ***
[2026-01-09 02:50:28] total 440916
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc 223775780 Jan  8 21:06 ATLAS.root_0
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:06 start_atlas.sh
[2026-01-09 02:50:28] -rw-r--r--. 2 boinc boinc    592396 Jan  8 21:06 input.tar.gz
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc 223860801 Jan  9 02:46 HITS.pool.root.1
[2026-01-09 02:50:28] -rw-------. 1 boinc boinc   3246080 Jan  9 02:50 result.tar.gz
02:50:29 (11474): run_atlas exited; CPU time 74838.736701
02:50:29 (11474): called boinc_finish(0)

</stderr_txt>
]]>

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